RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 PPIAL4FP0DN26 164 aa17.87■□□□□ 0.45
SPAST-204ENST00000621856 DUX4L9Q6RFH8 374 aaPredicted RBP17.87■□□□□ 0.45
SPAST-204ENST00000621856 LGI3Q8N145 548 aa17.87■□□□□ 0.45
SPAST-204ENST00000621856 CNTNAP3BQ96NU0 1288 aa17.87■□□□□ 0.45
SPAST-204ENST00000621856 TP53RKQ96S44 253 aa17.87■□□□□ 0.45
SPAST-204ENST00000621856 CNTNAP3Q9BZ76 1288 aa17.87■□□□□ 0.45
SPAST-204ENST00000621856 NMES1Q9C002 83 aa17.87■□□□□ 0.45
SPAST-204ENST00000621856 PARP12Q9H0J9 701 aaKnown RBP17.87■□□□□ 0.45
SPAST-204ENST00000621856 DUX4Q9UBX2 424 aa17.87■□□□□ 0.45
SPAST-204ENST00000621856 UBE2J1Q9Y385 318 aaPredicted RBP17.87■□□□□ 0.45
SPAST-204ENST00000621856 PPIAL4AQ9Y536 164 aa17.87■□□□□ 0.45
SPAST-204ENST00000621856 MPTX1A8MV57 137 aa17.86■□□□□ 0.45
SPAST-204ENST00000621856 ARPC5O15511 151 aa17.86■□□□□ 0.45
SPAST-204ENST00000621856 TNFSF12O43508 249 aa17.86■□□□□ 0.45
SPAST-204ENST00000621856 OR8U9P0C7N5 309 aa17.86■□□□□ 0.45
SPAST-204ENST00000621856 GZMHP20718 246 aa17.86■□□□□ 0.45
SPAST-204ENST00000621856 FAM216BQ8N7L0 139 aa17.86■□□□□ 0.45
SPAST-204ENST00000621856 OR8U1Q8NH10 309 aa17.86■□□□□ 0.45
SPAST-204ENST00000621856 RFESDQ8TAC1 157 aa17.86■□□□□ 0.45
SPAST-204ENST00000621856 GLYATL2Q8WU03 294 aa17.86■□□□□ 0.45
SPAST-204ENST00000621856 C2orf50Q96LR7 162 aa17.86■□□□□ 0.45
SPAST-204ENST00000621856 FAM234AQ9H0X4 552 aa17.86■□□□□ 0.45
SPAST-204ENST00000621856 OR6C3Q9NZP0 311 aa17.86■□□□□ 0.45
SPAST-204ENST00000621856 PAIP2BQ9ULR5 123 aaKnown RBP17.86■□□□□ 0.45
SPAST-204ENST00000621856 IGHV1-69-2A0A0G2JMI3 117 aa17.86■□□□□ 0.45
SPAST-204ENST00000621856 HMSDA8MTL9 139 aa17.86■□□□□ 0.45
SPAST-204ENST00000621856 L7N2F9 121 aa17.86■□□□□ 0.45
SPAST-204ENST00000621856 SIGLEC5O15389 551 aa17.86■□□□□ 0.45
SPAST-204ENST00000621856 SSTR2P30874 369 aa17.86■□□□□ 0.45
SPAST-204ENST00000621856 GNMTQ14749 295 aa17.86■□□□□ 0.45
SPAST-204ENST00000621856 MEX3BQ6ZN04 569 aaKnown RBP17.86■□□□□ 0.45
SPAST-204ENST00000621856 BVESQ8NE79 360 aa17.86■□□□□ 0.45
SPAST-204ENST00000621856 C14orf79Q96F83 325 aa17.86■□□□□ 0.45
SPAST-204ENST00000621856 OR10C1Q96KK4 312 aa17.86■□□□□ 0.45
SPAST-204ENST00000621856 GPHA2Q96T91 129 aa17.86■□□□□ 0.45
SPAST-204ENST00000621856 GON7Q9BXV9 100 aa17.86■□□□□ 0.45
SPAST-204ENST00000621856 C15orf65H3BRN8 121 aa17.85■□□□□ 0.45
SPAST-204ENST00000621856 PGLYRP1O75594 196 aaPredicted RBP17.85■□□□□ 0.45
SPAST-204ENST00000621856 SNAPC5O75971 98 aa17.85■□□□□ 0.45
SPAST-204ENST00000621856 SRPXP78539 464 aa17.85■□□□□ 0.45
SPAST-204ENST00000621856 LTC4SQ16873 150 aa17.85■□□□□ 0.45
SPAST-204ENST00000621856 GGNBP1Q5YKI7 109 aa17.85■□□□□ 0.45
SPAST-204ENST00000621856 LRTM2Q8N967 370 aa17.85■□□□□ 0.45
SPAST-204ENST00000621856 MSI2Q96DH6 328 aaKnown RBP17.85■□□□□ 0.45
SPAST-204ENST00000621856 OR2S2Q9NQN1 319 aa17.85■□□□□ 0.45
SPAST-204ENST00000621856 IGHV3-43A0A0B4J1X8 118 aa17.84■□□□□ 0.45
SPAST-204ENST00000621856 TMPRSS2O15393 492 aa17.84■□□□□ 0.45
SPAST-204ENST00000621856 IGHV3-43DP0DP04 118 aa17.84■□□□□ 0.45
SPAST-204ENST00000621856 CXCL2P19875 107 aa17.84■□□□□ 0.45
SPAST-204ENST00000621856 PPP1CCP36873 323 aaKnown RBP17.84■□□□□ 0.45
SPAST-204ENST00000621856 C11orf87Q6NUJ2 197 aa17.84■□□□□ 0.45
SPAST-204ENST00000621856 THAP6Q8TBB0 222 aa17.84■□□□□ 0.45
SPAST-204ENST00000621856 AKR1E2Q96JD6 320 aa17.84■□□□□ 0.45
SPAST-204ENST00000621856 TMEM222Q9H0R3 208 aa17.84■□□□□ 0.45
SPAST-204ENST00000621856 NCOR1P1Q9H4R4 102 aa17.84■□□□□ 0.45
SPAST-204ENST00000621856 GSKIPQ9P0R6 139 aa17.84■□□□□ 0.45
SPAST-204ENST00000621856 CACNA1BQ00975 2339 aa17.84■□□□□ 0.45
SPAST-204ENST00000621856 C4BPBP20851 252 aa17.84■□□□□ 0.45
SPAST-204ENST00000621856 PSMB6P28072 239 aa17.84■□□□□ 0.45
SPAST-204ENST00000621856 PPOXP50336 477 aa17.84■□□□□ 0.45
SPAST-204ENST00000621856 IAH1Q2TAA2 248 aaPredicted RBP17.84■□□□□ 0.45
SPAST-204ENST00000621856 FAM53AQ6NSI3 398 aaPredicted RBP17.84■□□□□ 0.45
SPAST-204ENST00000621856 C18orf12Q96KH6 178 aa17.84■□□□□ 0.45
SPAST-204ENST00000621856 RGS13O14921 159 aa17.83■□□□□ 0.44
SPAST-204ENST00000621856 MPC2O95563 127 aa17.83■□□□□ 0.44
SPAST-204ENST00000621856 SLC25A4P12235 298 aa17.83■□□□□ 0.44
SPAST-204ENST00000621856 HTD2P86397 168 aa17.83■□□□□ 0.44
SPAST-204ENST00000621856 CR1LQ2VPA4 569 aa17.83■□□□□ 0.44
SPAST-204ENST00000621856 HFEQ30201 348 aa17.83■□□□□ 0.44
SPAST-204ENST00000621856 TMEM268Q5VZI3 342 aa17.83■□□□□ 0.44
SPAST-204ENST00000621856 LYZL2Q7Z4W2 148 aa17.83■□□□□ 0.44
SPAST-204ENST00000621856 ZNF546Q86UE3 836 aa17.83■□□□□ 0.44
SPAST-204ENST00000621856 TOLLIPQ9H0E2 274 aa17.83■□□□□ 0.44
SPAST-204ENST00000621856 KALRNO60229 2985 aa17.82■□□□□ 0.44
SPAST-204ENST00000621856 TRGV10A0A0A0MS01 117 aa17.82■□□□□ 0.44
SPAST-204ENST00000621856 H0Y980 276 aa17.82■□□□□ 0.44
SPAST-204ENST00000621856 ZNF695Q8IW36 515 aa17.82■□□□□ 0.44
SPAST-204ENST00000621856 OR51H1Q8NH63 302 aa17.82■□□□□ 0.44
SPAST-204ENST00000621856 LHFPL5Q8TAF8 219 aa17.82■□□□□ 0.44
SPAST-204ENST00000621856 RAB9BQ9NP90 201 aa17.82■□□□□ 0.44
SPAST-204ENST00000621856 CBLN4Q9NTU7 201 aa17.82■□□□□ 0.44
SPAST-204ENST00000621856 CALYQ9NYX4 217 aa17.82■□□□□ 0.44
SPAST-204ENST00000621856 USP24Q9UPU5 2620 aa17.82■□□□□ 0.44
SPAST-204ENST00000621856 NDUFB7P17568 137 aa17.81■□□□□ 0.44
SPAST-204ENST00000621856 F2RP25116 425 aa17.81■□□□□ 0.44
SPAST-204ENST00000621856 MFFQ9GZY8 342 aa17.81■□□□□ 0.44
SPAST-204ENST00000621856 OR2D2Q9H210 308 aa17.81■□□□□ 0.44
SPAST-204ENST00000621856 MBD2Q9UBB5 411 aa17.81■□□□□ 0.44
SPAST-204ENST00000621856 GNG12Q9UBI6 72 aa17.81■□□□□ 0.44
SPAST-204ENST00000621856 RNF150Q9ULK6 438 aa17.81■□□□□ 0.44
SPAST-204ENST00000621856 IGLV2-14P01704 120 aa17.81■□□□□ 0.44
SPAST-204ENST00000621856 DRAM1Q8N682 238 aa17.81■□□□□ 0.44
SPAST-204ENST00000621856 ZNF645Q8N7E2 425 aa17.81■□□□□ 0.44
SPAST-204ENST00000621856 SLC35G3Q8N808 338 aa17.81■□□□□ 0.44
SPAST-204ENST00000621856 SLC25A10Q9UBX3 287 aaPredicted RBP17.81■□□□□ 0.44
SPAST-204ENST00000621856 JPT1Q9UK76 154 aa17.81■□□□□ 0.44
SPAST-204ENST00000621856 IGSF10Q6WRI0 2623 aa17.8■□□□□ 0.44
SPAST-204ENST00000621856 C19orf84I3L1E1 186 aa17.8■□□□□ 0.44
SPAST-204ENST00000621856 ADAM20O43506 726 aa17.8■□□□□ 0.44
SPAST-204ENST00000621856 RPA2P15927 270 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms