RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 CA7P43166 264 aa8.8□□□□□ -1
VPS11-208ENST00000621676 NDUFA5Q16718 116 aa8.8□□□□□ -1
VPS11-208ENST00000621676 PCSK4Q6UW60 755 aa8.8□□□□□ -1
VPS11-208ENST00000621676 HSD17B11Q8NBQ5 300 aa8.8□□□□□ -1
VPS11-208ENST00000621676 TRDCB7Z8K6 153 aa8.8□□□□□ -1
VPS11-208ENST00000621676 SSSCA1O60232 199 aa8.8□□□□□ -1
VPS11-208ENST00000621676 CEBPGP53567 150 aa8.8□□□□□ -1
VPS11-208ENST00000621676 SCAND1P57086 179 aa8.8□□□□□ -1
VPS11-208ENST00000621676 OR2B8PP59922 312 aa8.8□□□□□ -1
VPS11-208ENST00000621676 NKX6-1P78426 367 aaPredicted RBP8.8□□□□□ -1
VPS11-208ENST00000621676 FIP1L1Q6UN15 594 aaKnown RBP8.8□□□□□ -1
VPS11-208ENST00000621676 ARRDC1Q8N5I2 433 aa8.8□□□□□ -1
VPS11-208ENST00000621676 GLYATL2Q8WU03 294 aa8.8□□□□□ -1
VPS11-208ENST00000621676 GALMQ96C23 342 aa8.8□□□□□ -1
VPS11-208ENST00000621676 RRNAD1Q96FB5 475 aaKnown RBP8.8□□□□□ -1
VPS11-208ENST00000621676 SIRT7Q9NRC8 400 aa8.8□□□□□ -1
VPS11-208ENST00000621676 TMA7Q9Y2S6 64 aaKnown RBP8.8□□□□□ -1
VPS11-208ENST00000621676 SESN1Q9Y6P5 492 aa8.8□□□□□ -1
VPS11-208ENST00000621676 ANKRD34BA5PLL1 514 aa8.8□□□□□ -1
VPS11-208ENST00000621676 FOXI3A8MTJ6 420 aaPredicted RBP8.8□□□□□ -1
VPS11-208ENST00000621676 SCGNO76038 276 aa8.8□□□□□ -1
VPS11-208ENST00000621676 INO80EQ8NBZ0 244 aaPredicted RBP8.8□□□□□ -1
VPS11-208ENST00000621676 OR1S1Q8NH92 325 aa8.8□□□□□ -1
VPS11-208ENST00000621676 SCO1O75880 301 aa8.79□□□□□ -1
VPS11-208ENST00000621676 SFT2D2O95562 160 aa8.79□□□□□ -1
VPS11-208ENST00000621676 RLN2P04090 185 aa8.79□□□□□ -1
VPS11-208ENST00000621676 TNFSF4P23510 183 aa8.79□□□□□ -1
VPS11-208ENST00000621676 NHLH2Q02577 135 aa8.79□□□□□ -1
VPS11-208ENST00000621676 EXOSC2Q13868 293 aaKnown RBP8.79□□□□□ -1
VPS11-208ENST00000621676 TMED6Q8WW62 240 aa8.79□□□□□ -1
VPS11-208ENST00000621676 C22orf15Q8WYQ4 148 aa8.79□□□□□ -1
VPS11-208ENST00000621676 NUP50Q9UKX7 468 aa8.79□□□□□ -1
VPS11-208ENST00000621676 HIVEP2P31629 2446 aa8.79□□□□□ -1
VPS11-208ENST00000621676 TRAV14DV4A0A0A6YYC5 116 aa8.79□□□□□ -1
VPS11-208ENST00000621676 A0A0G2JRQ6 117 aa8.79□□□□□ -1
VPS11-208ENST00000621676 C3orf85A0A1B0GTC6 90 aa8.79□□□□□ -1
VPS11-208ENST00000621676 FAM24AA6NFZ4 105 aa8.79□□□□□ -1
VPS11-208ENST00000621676 PRAF2O60831 178 aa8.79□□□□□ -1
VPS11-208ENST00000621676 FCGR3BO75015 233 aa8.79□□□□□ -1
VPS11-208ENST00000621676 C1QL1O75973 258 aa8.79□□□□□ -1
VPS11-208ENST00000621676 IFNA21P01568 189 aa8.79□□□□□ -1
VPS11-208ENST00000621676 FPR2P25090 351 aa8.79□□□□□ -1
VPS11-208ENST00000621676 CHRNB4P30926 498 aa8.79□□□□□ -1
VPS11-208ENST00000621676 DIAPH2-AS1Q14236 149 aa8.79□□□□□ -1
VPS11-208ENST00000621676 CCDC36Q8IYA8 594 aa8.79□□□□□ -1
VPS11-208ENST00000621676 RNF7Q9UBF6 113 aa8.79□□□□□ -1
VPS11-208ENST00000621676 PCDHB10Q9UN67 800 aa8.79□□□□□ -1
VPS11-208ENST00000621676 FBN2P35556 2912 aa8.79□□□□□ -1
VPS11-208ENST00000621676 ITPR3Q14573 2671 aa8.79□□□□□ -1
VPS11-208ENST00000621676 C17orf100A8MU93 164 aa8.79□□□□□ -1
VPS11-208ENST00000621676 HMGB3O15347 200 aaKnown RBP8.79□□□□□ -1
VPS11-208ENST00000621676 MPPED1O15442 326 aa8.79□□□□□ -1
VPS11-208ENST00000621676 ENSAO43768 121 aaKnown RBP8.79□□□□□ -1
VPS11-208ENST00000621676 TMUB2Q71RG4 321 aa8.79□□□□□ -1
VPS11-208ENST00000621676 CMTM1Q8IZ96 169 aa8.79□□□□□ -1
VPS11-208ENST00000621676 RNASE6Q93091 150 aaKnown RBP8.79□□□□□ -1
VPS11-208ENST00000621676 SHARPINQ9H0F6 387 aa8.79□□□□□ -1
VPS11-208ENST00000621676 TMEM231Q9H6L2 316 aa8.79□□□□□ -1
VPS11-208ENST00000621676 GLS2Q9UI32 602 aa8.79□□□□□ -1
VPS11-208ENST00000621676 M0R1X1 148 aa8.78□□□□□ -1
VPS11-208ENST00000621676 CBX5P45973 191 aa8.78□□□□□ -1
VPS11-208ENST00000621676 RPL30P62888 115 aaKnown RBP8.78□□□□□ -1
VPS11-208ENST00000621676 FAM189A2Q15884 450 aa8.78□□□□□ -1
VPS11-208ENST00000621676 ZFAND1Q8TCF1 268 aa8.78□□□□□ -1
VPS11-208ENST00000621676 MITD1Q8WV92 249 aa8.78□□□□□ -1
VPS11-208ENST00000621676 H7C2Y5 167 aa8.78□□□□□ -1
VPS11-208ENST00000621676 NUPL2O15504 423 aaKnown RBP8.78□□□□□ -1
VPS11-208ENST00000621676 DUS4LO95620 317 aaKnown RBP8.78□□□□□ -1
VPS11-208ENST00000621676 ZNF134P52741 427 aa8.78□□□□□ -1
VPS11-208ENST00000621676 ZNF273Q14593 569 aa8.78□□□□□ -1
VPS11-208ENST00000621676 OR8G2PQ6IF36 304 aa8.78□□□□□ -1
VPS11-208ENST00000621676 TCTE3Q8IZS6 198 aa8.78□□□□□ -1
VPS11-208ENST00000621676 ZNF680Q8NEM1 530 aa8.78□□□□□ -1
VPS11-208ENST00000621676 OR5M8Q8NGP6 311 aa8.78□□□□□ -1
VPS11-208ENST00000621676 LILRB4Q8NHJ6 448 aa8.78□□□□□ -1
VPS11-208ENST00000621676 CLCC1Q96S66 551 aa8.78□□□□□ -1
VPS11-208ENST00000621676 C19orf12Q9NSK7 152 aa8.78□□□□□ -1
VPS11-208ENST00000621676 FN1P02751 2386 aaKnown RBP8.77□□□□□ -1
VPS11-208ENST00000621676 SHISA9B4DS77 424 aa8.77□□□□□ -1
VPS11-208ENST00000621676 DEFA4P12838 97 aa8.77□□□□□ -1
VPS11-208ENST00000621676 PSMB6P28072 239 aa8.77□□□□□ -1
VPS11-208ENST00000621676 RPL31P62899 125 aaKnown RBP8.77□□□□□ -1
VPS11-208ENST00000621676 VAX1Q5SQQ9 334 aa8.77□□□□□ -1
VPS11-208ENST00000621676 C1orf162Q8NEQ5 155 aaPredicted RBP8.77□□□□□ -1
VPS11-208ENST00000621676 MRPS24Q96EL2 167 aaKnown RBP8.77□□□□□ -1
VPS11-208ENST00000621676 FLNAP21333 2647 aaKnown RBP8.77□□□□□ -1.01
VPS11-208ENST00000621676 TMEM30CPA0ZSE6 113 aa8.77□□□□□ -1.01
VPS11-208ENST00000621676 ODAMA1E959 279 aa8.77□□□□□ -1.01
VPS11-208ENST00000621676 RGS13O14921 159 aa8.77□□□□□ -1.01
VPS11-208ENST00000621676 TXNL1O43396 289 aa8.77□□□□□ -1.01
VPS11-208ENST00000621676 RAP2BP61225 183 aa8.77□□□□□ -1.01
VPS11-208ENST00000621676 ARF6P62330 175 aa8.77□□□□□ -1.01
VPS11-208ENST00000621676 HLA-DRB3P79483 266 aa8.77□□□□□ -1.01
VPS11-208ENST00000621676 TMEM267Q0VDI3 215 aaPredicted RBP8.77□□□□□ -1.01
VPS11-208ENST00000621676 SHEQ5VZ18 495 aa8.77□□□□□ -1.01
VPS11-208ENST00000621676 TMEM211Q6ICI0 200 aa8.77□□□□□ -1.01
VPS11-208ENST00000621676 RNF115Q9Y4L5 304 aa8.77□□□□□ -1.01
VPS11-208ENST00000621676 ARPC4-TTLL3A0A0A6YYG9 625 aa8.77□□□□□ -1.01
VPS11-208ENST00000621676 KIR2DS1A0A191URI9 304 aa8.77□□□□□ -1.01
VPS11-208ENST00000621676 C17orf98A8MV24 154 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms