RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 AGBL5Q8NDL9 886 aa16.66■□□□□ 0.26
PDLIM3-212ENST00000620787 OR10J5Q8NHC4 309 aa16.66■□□□□ 0.26
PDLIM3-212ENST00000620787 ABHD3Q8WU67 409 aa16.66■□□□□ 0.26
PDLIM3-212ENST00000620787 LSM10Q969L4 123 aaKnown RBP16.66■□□□□ 0.26
PDLIM3-212ENST00000620787 ZNF845Q96IR2 970 aaPredicted RBP16.66■□□□□ 0.26
PDLIM3-212ENST00000620787 GPR87Q9BY21 358 aa16.66■□□□□ 0.26
PDLIM3-212ENST00000620787 MAP1LC3BQ9GZQ8 125 aa16.66■□□□□ 0.26
PDLIM3-212ENST00000620787 RIMS4Q9H426 269 aaPredicted RBP16.66■□□□□ 0.26
PDLIM3-212ENST00000620787 ERRFI1Q9UJM3 462 aaPredicted RBP16.66■□□□□ 0.26
PDLIM3-212ENST00000620787 MKRN2OSH3BPM6 223 aa16.65■□□□□ 0.26
PDLIM3-212ENST00000620787 DVL1O14640 695 aa16.65■□□□□ 0.26
PDLIM3-212ENST00000620787 PFN1P07737 140 aaKnown RBP16.65■□□□□ 0.26
PDLIM3-212ENST00000620787 MKXQ8IYA7 352 aa16.65■□□□□ 0.26
PDLIM3-212ENST00000620787 PYGO2Q9BRQ0 406 aa16.65■□□□□ 0.26
PDLIM3-212ENST00000620787 AGMATQ9BSE5 352 aa16.65■□□□□ 0.26
PDLIM3-212ENST00000620787 PLK3Q9H4B4 646 aa16.65■□□□□ 0.26
PDLIM3-212ENST00000620787 PRDM6Q9NQX0 595 aa16.65■□□□□ 0.26
PDLIM3-212ENST00000620787 PIGBOS1A0A0B4J2F0 54 aa16.65■□□□□ 0.26
PDLIM3-212ENST00000620787 SLC31A2O15432 143 aa16.65■□□□□ 0.26
PDLIM3-212ENST00000620787 IGKV1-5P01602 117 aa16.65■□□□□ 0.26
PDLIM3-212ENST00000620787 AMBPP02760 352 aa16.65■□□□□ 0.26
PDLIM3-212ENST00000620787 COL10A1Q03692 680 aa16.65■□□□□ 0.26
PDLIM3-212ENST00000620787 BEND4Q6ZU67 534 aa16.65■□□□□ 0.26
PDLIM3-212ENST00000620787 C16orf82Q7Z2V1 217 aa16.65■□□□□ 0.26
PDLIM3-212ENST00000620787 RNASEH2CQ8TDP1 164 aaKnown RBP16.65■□□□□ 0.26
PDLIM3-212ENST00000620787 NAT8Q9UHE5 227 aa16.65■□□□□ 0.26
PDLIM3-212ENST00000620787 IFNA1P01562 189 aa16.64■□□□□ 0.25
PDLIM3-212ENST00000620787 IGLV2-14P01704 120 aa16.64■□□□□ 0.25
PDLIM3-212ENST00000620787 GZMBP10144 247 aa16.64■□□□□ 0.25
PDLIM3-212ENST00000620787 CCL2P13500 99 aa16.64■□□□□ 0.25
PDLIM3-212ENST00000620787 CCNOP22674 350 aa16.64■□□□□ 0.25
PDLIM3-212ENST00000620787 ADIRFQ15847 76 aa16.64■□□□□ 0.25
PDLIM3-212ENST00000620787 CYP2G1PQ6ZSU1 146 aa16.64■□□□□ 0.25
PDLIM3-212ENST00000620787 DMRTC2Q8IXT2 367 aaPredicted RBP16.64■□□□□ 0.25
PDLIM3-212ENST00000620787 WDR61Q9GZS3 305 aaKnown RBP16.64■□□□□ 0.25
PDLIM3-212ENST00000620787 FREM1Q5H8C1 2179 aa16.64■□□□□ 0.25
PDLIM3-212ENST00000620787 TRAV24A0A0B4J272 114 aa16.64■□□□□ 0.25
PDLIM3-212ENST00000620787 CD300LBA8K4G0 201 aa16.64■□□□□ 0.25
PDLIM3-212ENST00000620787 PMS2P11Q13670 270 aa16.64■□□□□ 0.25
PDLIM3-212ENST00000620787 WIPI1Q5MNZ9 446 aaPredicted RBP16.64■□□□□ 0.25
PDLIM3-212ENST00000620787 NCR3LG1Q68D85 454 aa16.64■□□□□ 0.25
PDLIM3-212ENST00000620787 LILRB2Q8N423 598 aa16.64■□□□□ 0.25
PDLIM3-212ENST00000620787 OR1P1Q8NH06 330 aa16.64■□□□□ 0.25
PDLIM3-212ENST00000620787 ZNF488Q96MN9 340 aa16.64■□□□□ 0.25
PDLIM3-212ENST00000620787 SMIM7Q9BQ49 75 aa16.64■□□□□ 0.25
PDLIM3-212ENST00000620787 PARD6GQ9BYG4 376 aaPredicted RBP16.64■□□□□ 0.25
PDLIM3-212ENST00000620787 LRRC3CA6NJW4 275 aa16.63■□□□□ 0.25
PDLIM3-212ENST00000620787 CYTIPO60759 359 aa16.63■□□□□ 0.25
PDLIM3-212ENST00000620787 ZNF737O75373 536 aa16.63■□□□□ 0.25
PDLIM3-212ENST00000620787 ELLP55199 621 aaPredicted RBP16.63■□□□□ 0.25
PDLIM3-212ENST00000620787 HBG1P69891 147 aa16.63■□□□□ 0.25
PDLIM3-212ENST00000620787 HBG2P69892 147 aa16.63■□□□□ 0.25
PDLIM3-212ENST00000620787 FAM180AQ6UWF9 173 aa16.63■□□□□ 0.25
PDLIM3-212ENST00000620787 MRPL21Q7Z2W9 205 aaKnown RBP16.63■□□□□ 0.25
PDLIM3-212ENST00000620787 OR10V1Q8NGI7 309 aa16.63■□□□□ 0.25
PDLIM3-212ENST00000620787 RDH5Q92781 318 aa16.63■□□□□ 0.25
PDLIM3-212ENST00000620787 OR4C12Q96R67 309 aa16.63■□□□□ 0.25
PDLIM3-212ENST00000620787 OR1A1Q9P1Q5 309 aa16.63■□□□□ 0.25
PDLIM3-212ENST00000620787 GAB2Q9UQC2 676 aa16.63■□□□□ 0.25
PDLIM3-212ENST00000620787 HS3ST1O14792 307 aa16.63■□□□□ 0.25
PDLIM3-212ENST00000620787 P04436 131 aa16.63■□□□□ 0.25
PDLIM3-212ENST00000620787 NDUFB7P17568 137 aa16.63■□□□□ 0.25
PDLIM3-212ENST00000620787 TAS2R60P59551 318 aa16.63■□□□□ 0.25
PDLIM3-212ENST00000620787 IL11RAQ14626 422 aa16.63■□□□□ 0.25
PDLIM3-212ENST00000620787 NRN1LQ496H8 165 aa16.63■□□□□ 0.25
PDLIM3-212ENST00000620787 PSMF1Q92530 271 aa16.63■□□□□ 0.25
PDLIM3-212ENST00000620787 PINX1Q96BK5 328 aaKnown RBP16.63■□□□□ 0.25
PDLIM3-212ENST00000620787 SGCZQ96LD1 299 aa16.63■□□□□ 0.25
PDLIM3-212ENST00000620787 ZNF552Q9H707 407 aaPredicted RBP16.63■□□□□ 0.25
PDLIM3-212ENST00000620787 ESPL1Q14674 2120 aa16.62■□□□□ 0.25
PDLIM3-212ENST00000620787 C3orf80F5H4A9 247 aa16.62■□□□□ 0.25
PDLIM3-212ENST00000620787 FGF7P21781 194 aa16.62■□□□□ 0.25
PDLIM3-212ENST00000620787 LINC00596Q86U02 117 aa16.62■□□□□ 0.25
PDLIM3-212ENST00000620787 PRSS50Q9UI38 385 aa16.62■□□□□ 0.25
PDLIM3-212ENST00000620787 MRPS17Q9Y2R5 130 aaKnown RBP16.62■□□□□ 0.25
PDLIM3-212ENST00000620787 C5orf49A4QMS7 147 aa16.62■□□□□ 0.25
PDLIM3-212ENST00000620787 IGKV1D-33P01593 117 aa16.62■□□□□ 0.25
PDLIM3-212ENST00000620787 IGKV1-33P01594 117 aa16.62■□□□□ 0.25
PDLIM3-212ENST00000620787 SELLP14151 372 aa16.62■□□□□ 0.25
PDLIM3-212ENST00000620787 GZMHP20718 246 aa16.62■□□□□ 0.25
PDLIM3-212ENST00000620787 PLA2G5P39877 138 aa16.62■□□□□ 0.25
PDLIM3-212ENST00000620787 ARF1P84077 181 aaKnown RBP16.62■□□□□ 0.25
PDLIM3-212ENST00000620787 MEF2BQ02080 365 aaPredicted RBP16.62■□□□□ 0.25
PDLIM3-212ENST00000620787 TMEM241Q24JQ0 296 aa16.62■□□□□ 0.25
PDLIM3-212ENST00000620787 COA6Q5JTJ3 125 aaKnown RBP16.62■□□□□ 0.25
PDLIM3-212ENST00000620787 NECAP1Q8NC96 275 aa16.62■□□□□ 0.25
PDLIM3-212ENST00000620787 OR1K1Q8NGR3 316 aa16.62■□□□□ 0.25
PDLIM3-212ENST00000620787 SAP25Q8TEE9 199 aa16.62■□□□□ 0.25
PDLIM3-212ENST00000620787 TAF15Q92804 592 aaKnown RBP eCLIP16.62■□□□□ 0.25
PDLIM3-212ENST00000620787 PHF7Q9BWX1 381 aaPredicted RBP16.62■□□□□ 0.25
PDLIM3-212ENST00000620787 A0A096LPE4 126 aa16.61■□□□□ 0.25
PDLIM3-212ENST00000620787 A0A1W2PPZ6 126 aa16.61■□□□□ 0.25
PDLIM3-212ENST00000620787 KBTBD11O94819 623 aa16.61■□□□□ 0.25
PDLIM3-212ENST00000620787 Q3ZCU0 254 aa16.61■□□□□ 0.25
PDLIM3-212ENST00000620787 ZNF585BQ52M93 769 aa16.61■□□□□ 0.25
PDLIM3-212ENST00000620787 CENPVQ7Z7K6 275 aaPredicted RBP16.61■□□□□ 0.25
PDLIM3-212ENST00000620787 TGIF2LYQ8IUE0 185 aa16.61■□□□□ 0.25
PDLIM3-212ENST00000620787 RPP25LQ8N5L8 163 aaKnown RBP16.61■□□□□ 0.25
PDLIM3-212ENST00000620787 OR5A2Q8NGI9 324 aa16.61■□□□□ 0.25
PDLIM3-212ENST00000620787 OR51G1Q8NGK1 321 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms