RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 IFNA1P01562 189 aa8.93□□□□□ -0.98
VPS11-207ENST00000620429 JMJD7P0C870 316 aa8.93□□□□□ -0.98
VPS11-207ENST00000620429 CTLA4P16410 223 aa8.93□□□□□ -0.98
VPS11-207ENST00000620429 ACKR1Q16570 336 aa8.93□□□□□ -0.98
VPS11-207ENST00000620429 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.93□□□□□ -0.98
VPS11-207ENST00000620429 ARHGEF39Q8N4T4 335 aa8.93□□□□□ -0.98
VPS11-207ENST00000620429 OR11L1Q8NGX0 322 aa8.93□□□□□ -0.98
VPS11-207ENST00000620429 SLC37A2Q8TED4 501 aa8.93□□□□□ -0.98
VPS11-207ENST00000620429 PRTFDC1Q9NRG1 225 aa8.93□□□□□ -0.98
VPS11-207ENST00000620429 A0A0J9YY10 115 aa8.92□□□□□ -0.98
VPS11-207ENST00000620429 CEBPZOSA8MTT3 80 aa8.92□□□□□ -0.98
VPS11-207ENST00000620429 TMEM250H0YL14 139 aa8.92□□□□□ -0.98
VPS11-207ENST00000620429 NPIPB7O75200 414 aa8.92□□□□□ -0.98
VPS11-207ENST00000620429 RAD51DO75771 328 aa8.92□□□□□ -0.98
VPS11-207ENST00000620429 CSNK2A1P68400 391 aaPredicted RBP8.92□□□□□ -0.98
VPS11-207ENST00000620429 PLPPR5Q32ZL2 321 aa8.92□□□□□ -0.98
VPS11-207ENST00000620429 FFAR4Q5NUL3 377 aa8.92□□□□□ -0.98
VPS11-207ENST00000620429 CSNK2A3Q8NEV1 391 aa8.92□□□□□ -0.98
VPS11-207ENST00000620429 OR52N5Q8NH56 324 aa8.92□□□□□ -0.98
VPS11-207ENST00000620429 ATP6V0BQ99437 205 aa8.92□□□□□ -0.98
VPS11-207ENST00000620429 FAM60AQ9NP50 221 aa8.92□□□□□ -0.98
VPS11-207ENST00000620429 MMP17Q9ULZ9 603 aa8.92□□□□□ -0.98
VPS11-207ENST00000620429 VDAC3Q9Y277 283 aa8.92□□□□□ -0.98
VPS11-207ENST00000620429 R4GMQ9 66 aa8.92□□□□□ -0.98
VPS11-207ENST00000620429 A0A0U1RQK1 487 aa8.92□□□□□ -0.98
VPS11-207ENST00000620429 P2RY10O00398 339 aa8.92□□□□□ -0.98
VPS11-207ENST00000620429 TNFRSF10CO14798 259 aa8.92□□□□□ -0.98
VPS11-207ENST00000620429 LHX2P50458 406 aa8.92□□□□□ -0.98
VPS11-207ENST00000620429 PRRX1P54821 245 aa8.92□□□□□ -0.98
VPS11-207ENST00000620429 SNU13P55769 128 aaKnown RBP8.92□□□□□ -0.98
VPS11-207ENST00000620429 CLDN15P56746 228 aa8.92□□□□□ -0.98
VPS11-207ENST00000620429 RPL27P61353 136 aaKnown RBP8.92□□□□□ -0.98
VPS11-207ENST00000620429 RUNX1Q01196 453 aa8.92□□□□□ -0.98
VPS11-207ENST00000620429 FOXL1Q12952 345 aa8.92□□□□□ -0.98
VPS11-207ENST00000620429 FNDC7Q5VTL7 733 aa8.92□□□□□ -0.98
VPS11-207ENST00000620429 COX15Q7KZN9 410 aa8.92□□□□□ -0.98
VPS11-207ENST00000620429 LYZL2Q7Z4W2 148 aa8.92□□□□□ -0.98
VPS11-207ENST00000620429 VASH2Q86V25 355 aa8.92□□□□□ -0.98
VPS11-207ENST00000620429 TMEM105Q8N8V8 129 aa8.92□□□□□ -0.98
VPS11-207ENST00000620429 OR10W1Q8NGF6 305 aa8.92□□□□□ -0.98
VPS11-207ENST00000620429 OR5C1Q8NGR4 320 aa8.92□□□□□ -0.98
VPS11-207ENST00000620429 RNF114Q9Y508 228 aa8.92□□□□□ -0.98
VPS11-207ENST00000620429 IGLV1-36A0A0B4J1U3 117 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 A0A1W2PNV4 684 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 TRAF3IP2O43734 574 aaPredicted RBP8.91□□□□□ -0.98
VPS11-207ENST00000620429 VENTXO95231 258 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 NUDT14O95848 222 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 BGLAPP02818 100 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 ZNF93P35789 620 aaPredicted RBP8.91□□□□□ -0.98
VPS11-207ENST00000620429 TMEM50BP56557 158 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 BAXQ07812 192 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 Q0VG73 95 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 ABHD12BQ7Z5M8 362 aaPredicted RBP8.91□□□□□ -0.98
VPS11-207ENST00000620429 TMEM252Q8N6L7 170 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 FER1L6-AS1Q8NA97 138 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 SAMD10Q9BYL1 202 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 PNO1Q9NRX1 252 aaKnown RBP8.91□□□□□ -0.98
VPS11-207ENST00000620429 PPIAL4EA0A075B759 164 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 PPIAL4CA0A0B4J2A2 164 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 LOC101059948A0A1B0GTJ6 334 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 ODAMA1E959 279 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 GRIFINA4D1Z8 144 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 PPIAL4DF5H284 164 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 SOCS1O15524 211 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 ZNF253O75346 499 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 SRSF10O75494 262 aaKnown RBP8.91□□□□□ -0.98
VPS11-207ENST00000620429 UTS2O95399 124 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 TNFP01375 233 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 HLA-HP01893 362 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 GPX1P07203 203 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 PPIAL4FP0DN26 164 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 SELENOVP59797 346 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 KRTDAPP60985 99 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 AMMECR1LQ6DCA0 310 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 LINC00346Q8IVM7 164 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 SIGLECL1Q8N7X8 197 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 CADM4Q8NFZ8 388 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 RSG1Q9BU20 258 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 NAA60Q9H7X0 242 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 G6PC2Q9NQR9 355 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 COA3Q9Y2R0 106 aaPredicted RBP8.91□□□□□ -0.98
VPS11-207ENST00000620429 COL4A2P08572 1712 aa8.91□□□□□ -0.98
VPS11-207ENST00000620429 TRAV36DV7A0A075B6V5 113 aa8.9□□□□□ -0.98
VPS11-207ENST00000620429 REG1AP05451 166 aa8.9□□□□□ -0.98
VPS11-207ENST00000620429 PPP1CBP62140 327 aa8.9□□□□□ -0.98
VPS11-207ENST00000620429 YPEL5P62699 121 aa8.9□□□□□ -0.98
VPS11-207ENST00000620429 FUT7Q11130 342 aa8.9□□□□□ -0.98
VPS11-207ENST00000620429 LIAT1Q6ZQX7 453 aa8.9□□□□□ -0.98
VPS11-207ENST00000620429 OOSP2Q86WS3 158 aa8.9□□□□□ -0.98
VPS11-207ENST00000620429 SELENOHQ8IZQ5 122 aaKnown RBP8.9□□□□□ -0.98
VPS11-207ENST00000620429 SARAFQ96BY9 339 aa8.9□□□□□ -0.98
VPS11-207ENST00000620429 CENPMQ9NSP4 180 aa8.9□□□□□ -0.98
VPS11-207ENST00000620429 TDRD6O60522 2096 aaKnown RBP8.9□□□□□ -0.98
VPS11-207ENST00000620429 PCNX3Q9H6A9 2034 aa8.9□□□□□ -0.98
VPS11-207ENST00000620429 C17orf51A8MQB3 221 aa8.9□□□□□ -0.98
VPS11-207ENST00000620429 WNT2P09544 360 aa8.9□□□□□ -0.98
VPS11-207ENST00000620429 ZNF823P16415 610 aa8.9□□□□□ -0.98
VPS11-207ENST00000620429 CRISP2P16562 243 aa8.9□□□□□ -0.98
VPS11-207ENST00000620429 DYNLT3P51808 116 aa8.9□□□□□ -0.98
VPS11-207ENST00000620429 RAC3P60763 192 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms