RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 Q8IYB0 196 aa18.05■□□□□ 0.48
SGMS1-210ENST00000619438 FAM58AQ8N1B3 248 aa18.05■□□□□ 0.48
SGMS1-210ENST00000619438 EIF4E3Q8N5X7 224 aaKnown RBP18.05■□□□□ 0.48
SGMS1-210ENST00000619438 RRNAD1Q96FB5 475 aaKnown RBP18.05■□□□□ 0.48
SGMS1-210ENST00000619438 SLC2A9Q9NRM0 540 aa18.05■□□□□ 0.48
SGMS1-210ENST00000619438 SDHAF2Q9NX18 166 aa18.05■□□□□ 0.48
SGMS1-210ENST00000619438 C2CD3Q4AC94 2353 aa18.04■□□□□ 0.48
SGMS1-210ENST00000619438 IQCF6A8MYZ5 107 aa18.04■□□□□ 0.48
SGMS1-210ENST00000619438 F5H0A9 414 aaPredicted RBP18.04■□□□□ 0.48
SGMS1-210ENST00000619438 PPYP01298 95 aa18.04■□□□□ 0.48
SGMS1-210ENST00000619438 AADACP22760 399 aa18.04■□□□□ 0.48
SGMS1-210ENST00000619438 GCH1P30793 250 aa18.04■□□□□ 0.48
SGMS1-210ENST00000619438 KLF3P57682 345 aaPredicted RBP18.04■□□□□ 0.48
SGMS1-210ENST00000619438 RAB32Q13637 225 aa18.04■□□□□ 0.48
SGMS1-210ENST00000619438 CLEC9AQ6UXN8 241 aa18.04■□□□□ 0.48
SGMS1-210ENST00000619438 NEU4Q8WWR8 484 aaPredicted RBP18.04■□□□□ 0.48
SGMS1-210ENST00000619438 CXorf58Q96LI9 332 aa18.04■□□□□ 0.48
SGMS1-210ENST00000619438 SHARPINQ9H0F6 387 aa18.04■□□□□ 0.48
SGMS1-210ENST00000619438 IL36RNQ9UBH0 155 aa18.04■□□□□ 0.48
SGMS1-210ENST00000619438 IAH1Q2TAA2 248 aaPredicted RBP18.03■□□□□ 0.48
SGMS1-210ENST00000619438 ALKBH6Q3KRA9 238 aa18.03■□□□□ 0.48
SGMS1-210ENST00000619438 ZNF718Q3SXZ3 478 aa18.03■□□□□ 0.48
SGMS1-210ENST00000619438 ZNF880Q6PDB4 577 aa18.03■□□□□ 0.48
SGMS1-210ENST00000619438 LIAT1Q6ZQX7 453 aa18.03■□□□□ 0.48
SGMS1-210ENST00000619438 HSD17B13Q7Z5P4 300 aaPredicted RBP18.03■□□□□ 0.48
SGMS1-210ENST00000619438 C1orf174Q8IYL3 243 aa18.03■□□□□ 0.48
SGMS1-210ENST00000619438 BATF2Q8N1L9 274 aa18.03■□□□□ 0.48
SGMS1-210ENST00000619438 MAPK1IP1LQ8NDC0 245 aa18.03■□□□□ 0.48
SGMS1-210ENST00000619438 DNTTIP1Q9H147 329 aa18.03■□□□□ 0.48
SGMS1-210ENST00000619438 OR5AC2Q9NZP5 309 aa18.03■□□□□ 0.48
SGMS1-210ENST00000619438 TAAR3PQ9P1P4 343 aa18.03■□□□□ 0.48
SGMS1-210ENST00000619438 ARFGEF3Q5TH69 2177 aa18.03■□□□□ 0.48
SGMS1-210ENST00000619438 IGHV4-30-2A0A087WSY4 118 aa18.03■□□□□ 0.48
SGMS1-210ENST00000619438 TRDCB7Z8K6 153 aa18.03■□□□□ 0.48
SGMS1-210ENST00000619438 TK1P04183 234 aa18.03■□□□□ 0.48
SGMS1-210ENST00000619438 ACAA1P09110 424 aaPredicted RBP18.03■□□□□ 0.48
SGMS1-210ENST00000619438 ZNF250P15622 560 aa18.03■□□□□ 0.48
SGMS1-210ENST00000619438 PDLIM4P50479 330 aa18.03■□□□□ 0.48
SGMS1-210ENST00000619438 FXYD4P59646 89 aa18.03■□□□□ 0.48
SGMS1-210ENST00000619438 RND3P61587 244 aa18.03■□□□□ 0.48
SGMS1-210ENST00000619438 IGSF11Q5DX21 431 aa18.03■□□□□ 0.48
SGMS1-210ENST00000619438 SPATA46Q5T0L3 261 aa18.03■□□□□ 0.48
SGMS1-210ENST00000619438 GGNBP1Q5YKI7 109 aa18.03■□□□□ 0.48
SGMS1-210ENST00000619438 SUMF2Q8NBJ7 301 aa18.03■□□□□ 0.48
SGMS1-210ENST00000619438 OR2J1Q9GZK6 312 aa18.03■□□□□ 0.48
SGMS1-210ENST00000619438 POLDIP2Q9Y2S7 368 aa18.03■□□□□ 0.48
SGMS1-210ENST00000619438 TUSC2O75896 110 aa18.02■□□□□ 0.47
SGMS1-210ENST00000619438 DIRAS3O95661 229 aa18.02■□□□□ 0.47
SGMS1-210ENST00000619438 KCNJ3P48549 501 aa18.02■□□□□ 0.47
SGMS1-210ENST00000619438 ERVK11-1P61568 191 aa18.02■□□□□ 0.47
SGMS1-210ENST00000619438 PAN3Q58A45 887 aaKnown RBP18.02■□□□□ 0.47
SGMS1-210ENST00000619438 Q71RC1 249 aaPredicted RBP18.02■□□□□ 0.47
SGMS1-210ENST00000619438 LDLRAD3Q86YD5 345 aa18.02■□□□□ 0.47
SGMS1-210ENST00000619438 CYTL1Q9NRR1 136 aa18.02■□□□□ 0.47
SGMS1-210ENST00000619438 TREM2Q9NZC2 230 aa18.02■□□□□ 0.47
SGMS1-210ENST00000619438 TRAV24A0A0B4J272 114 aa18.01■□□□□ 0.47
SGMS1-210ENST00000619438 TMEM210A6NLX4 147 aa18.01■□□□□ 0.47
SGMS1-210ENST00000619438 FGF2P09038 288 aa18.01■□□□□ 0.47
SGMS1-210ENST00000619438 OR5AC1P0C628 307 aa18.01■□□□□ 0.47
SGMS1-210ENST00000619438 TPT1P13693 172 aaKnown RBP18.01■□□□□ 0.47
SGMS1-210ENST00000619438 LGI3Q8N145 548 aa18.01■□□□□ 0.47
SGMS1-210ENST00000619438 SLC25A40Q8TBP6 338 aa18.01■□□□□ 0.47
SGMS1-210ENST00000619438 LRRC20Q8TCA0 184 aa18.01■□□□□ 0.47
SGMS1-210ENST00000619438 MSI2Q96DH6 328 aaKnown RBP18.01■□□□□ 0.47
SGMS1-210ENST00000619438 GSKIPQ9P0R6 139 aa18.01■□□□□ 0.47
SGMS1-210ENST00000619438 SESN1Q9Y6P5 492 aa18.01■□□□□ 0.47
SGMS1-210ENST00000619438 A8MXK9 166 aa18■□□□□ 0.47
SGMS1-210ENST00000619438 ZNF205O95201 554 aa18■□□□□ 0.47
SGMS1-210ENST00000619438 LY6G6DO95868 133 aa18■□□□□ 0.47
SGMS1-210ENST00000619438 DAOP14920 347 aa18■□□□□ 0.47
SGMS1-210ENST00000619438 SRPXP78539 464 aa18■□□□□ 0.47
SGMS1-210ENST00000619438 Q6P435 159 aa18■□□□□ 0.47
SGMS1-210ENST00000619438 MRPL30Q8TCC3 161 aaKnown RBP18■□□□□ 0.47
SGMS1-210ENST00000619438 GLYATL2Q8WU03 294 aa18■□□□□ 0.47
SGMS1-210ENST00000619438 ZNF488Q96MN9 340 aa18■□□□□ 0.47
SGMS1-210ENST00000619438 NSD1Q96L73 2696 aaPredicted RBP18■□□□□ 0.47
SGMS1-210ENST00000619438 TAAR5O14804 337 aa17.99■□□□□ 0.47
SGMS1-210ENST00000619438 SLC25A16P16260 332 aa17.99■□□□□ 0.47
SGMS1-210ENST00000619438 MDH2P40926 338 aaKnown RBP17.99■□□□□ 0.47
SGMS1-210ENST00000619438 PHLDA2Q53GA4 152 aa17.99■□□□□ 0.47
SGMS1-210ENST00000619438 WDR86Q86TI4 376 aa17.99■□□□□ 0.47
SGMS1-210ENST00000619438 OR5T2Q8NGG2 359 aa17.99■□□□□ 0.47
SGMS1-210ENST00000619438 KLF14Q8TD94 323 aaPredicted RBP17.99■□□□□ 0.47
SGMS1-210ENST00000619438 NEK7Q8TDX7 302 aa17.99■□□□□ 0.47
SGMS1-210ENST00000619438 C10orf105Q8TEF2 133 aa17.99■□□□□ 0.47
SGMS1-210ENST00000619438 ADAT1Q9BUB4 502 aaKnown RBP17.99■□□□□ 0.47
SGMS1-210ENST00000619438 ZFP57Q9NU63 452 aa17.99■□□□□ 0.47
SGMS1-210ENST00000619438 IGLV3-9A0A075B6K5 115 aa17.99■□□□□ 0.47
SGMS1-210ENST00000619438 MSGN1A6NI15 193 aa17.99■□□□□ 0.47
SGMS1-210ENST00000619438 MPPED1O15442 326 aa17.99■□□□□ 0.47
SGMS1-210ENST00000619438 DEDDO75618 318 aa17.99■□□□□ 0.47
SGMS1-210ENST00000619438 RHBDL1O75783 438 aa17.99■□□□□ 0.47
SGMS1-210ENST00000619438 SCTP09683 121 aa17.99■□□□□ 0.47
SGMS1-210ENST00000619438 ZP3P21754 424 aa17.99■□□□□ 0.47
SGMS1-210ENST00000619438 GNRHRP30968 328 aa17.99■□□□□ 0.47
SGMS1-210ENST00000619438 PSG7Q13046 419 aa17.99■□□□□ 0.47
SGMS1-210ENST00000619438 HERPUD1Q15011 391 aa17.99■□□□□ 0.47
SGMS1-210ENST00000619438 BAP18Q8IXM2 172 aa17.99■□□□□ 0.47
SGMS1-210ENST00000619438 SCCPDHQ8NBX0 429 aa17.99■□□□□ 0.47
SGMS1-210ENST00000619438 NRIP2Q9BQI9 281 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms