RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 CLEC9AQ6UXN8 241 aa21.38■■□□□ 1.01
VEGFC-202ENST00000618562 CMTM1Q8IZ96 169 aa21.38■■□□□ 1.01
VEGFC-202ENST00000618562 COMMD1Q8N668 190 aa21.38■■□□□ 1.01
VEGFC-202ENST00000618562 CLEC18CQ8NCF0 446 aa21.38■■□□□ 1.01
VEGFC-202ENST00000618562 POLDIP2Q9Y2S7 368 aa21.38■■□□□ 1.01
VEGFC-202ENST00000618562 GRPP07492 148 aa21.38■■□□□ 1.01
VEGFC-202ENST00000618562 PVALBP20472 110 aaPredicted RBP21.38■■□□□ 1.01
VEGFC-202ENST00000618562 NKX2-1P43699 371 aaPredicted RBP21.38■■□□□ 1.01
VEGFC-202ENST00000618562 RAB5CP51148 216 aa21.38■■□□□ 1.01
VEGFC-202ENST00000618562 ERVK11-1P61568 191 aa21.38■■□□□ 1.01
VEGFC-202ENST00000618562 ZCCHC14Q8WYQ9 949 aaKnown RBP21.38■■□□□ 1.01
VEGFC-202ENST00000618562 IL22RA2Q969J5 263 aa21.38■■□□□ 1.01
VEGFC-202ENST00000618562 MSL2Q9HCI7 577 aa21.38■■□□□ 1.01
VEGFC-202ENST00000618562 TRAV24A0A0B4J272 114 aa21.37■■□□□ 1.01
VEGFC-202ENST00000618562 ATP6V1G2-DDX39BF2Z307 99 aa21.37■■□□□ 1.01
VEGFC-202ENST00000618562 NKX6-1P78426 367 aaPredicted RBP21.37■■□□□ 1.01
VEGFC-202ENST00000618562 C5orf24Q7Z6I8 188 aa21.37■■□□□ 1.01
VEGFC-202ENST00000618562 NDRG3Q9UGV2 375 aa21.37■■□□□ 1.01
VEGFC-202ENST00000618562 C16orf97H3BN30 126 aa21.36■■□□□ 1.01
VEGFC-202ENST00000618562 SFTA3P0C7M3 94 aa21.36■■□□□ 1.01
VEGFC-202ENST00000618562 EWSR1Q01844 656 aaKnown RBP eCLIP21.36■■□□□ 1.01
VEGFC-202ENST00000618562 PCSK4Q6UW60 755 aa21.36■■□□□ 1.01
VEGFC-202ENST00000618562 OR2C3Q8N628 320 aa21.36■■□□□ 1.01
VEGFC-202ENST00000618562 VKORC1Q9BQB6 163 aa21.36■■□□□ 1.01
VEGFC-202ENST00000618562 CACNA1AO00555 2505 aa21.36■■□□□ 1.01
VEGFC-202ENST00000618562 ATRXP46100 2492 aa21.36■■□□□ 1.01
VEGFC-202ENST00000618562 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP21.36■■□□□ 1.01
VEGFC-202ENST00000618562 A0A1B0GWJ7 208 aa21.36■■□□□ 1.01
VEGFC-202ENST00000618562 H0Y980 276 aa21.36■■□□□ 1.01
VEGFC-202ENST00000618562 OR8U9P0C7N5 309 aa21.36■■□□□ 1.01
VEGFC-202ENST00000618562 PGA5P0DJD9 388 aa21.36■■□□□ 1.01
VEGFC-202ENST00000618562 VDAC1P21796 283 aa21.36■■□□□ 1.01
VEGFC-202ENST00000618562 HLA-DRB3P79483 266 aa21.36■■□□□ 1.01
VEGFC-202ENST00000618562 NHLH2Q02577 135 aa21.36■■□□□ 1.01
VEGFC-202ENST00000618562 LRP11Q86VZ4 500 aa21.36■■□□□ 1.01
VEGFC-202ENST00000618562 OR5D13Q8NGL4 314 aa21.36■■□□□ 1.01
VEGFC-202ENST00000618562 OR8U1Q8NH10 309 aa21.36■■□□□ 1.01
VEGFC-202ENST00000618562 CABLES2Q9BTV7 478 aa21.36■■□□□ 1.01
VEGFC-202ENST00000618562 CXXC4Q9H2H0 198 aa21.36■■□□□ 1.01
VEGFC-202ENST00000618562 CCL28Q9NRJ3 127 aa21.36■■□□□ 1.01
VEGFC-202ENST00000618562 STRAPQ9Y3F4 350 aaKnown RBP21.36■■□□□ 1.01
VEGFC-202ENST00000618562 PIGBOS1A0A0B4J2F0 54 aa21.35■■□□□ 1.01
VEGFC-202ENST00000618562 S100GP29377 79 aa21.35■■□□□ 1.01
VEGFC-202ENST00000618562 NMSQ5H8A3 153 aa21.35■■□□□ 1.01
VEGFC-202ENST00000618562 Q8IYB0 196 aa21.35■■□□□ 1.01
VEGFC-202ENST00000618562 LILRB1Q8NHL6 650 aaPredicted RBP21.35■■□□□ 1.01
VEGFC-202ENST00000618562 RND1Q92730 232 aa21.35■■□□□ 1.01
VEGFC-202ENST00000618562 AIFM2Q9BRQ8 373 aa21.35■■□□□ 1.01
VEGFC-202ENST00000618562 HS3ST1O14792 307 aa21.35■■□□□ 1.01
VEGFC-202ENST00000618562 TSPAN15O95858 294 aa21.35■■□□□ 1.01
VEGFC-202ENST00000618562 CD80P33681 288 aa21.35■■□□□ 1.01
VEGFC-202ENST00000618562 GLRXP35754 106 aa21.35■■□□□ 1.01
VEGFC-202ENST00000618562 TMEM88Q6PEY1 159 aa21.35■■□□□ 1.01
VEGFC-202ENST00000618562 C20orf204Q6ZNR8 217 aa21.35■■□□□ 1.01
VEGFC-202ENST00000618562 C11orf53Q8IXP5 236 aa21.35■■□□□ 1.01
VEGFC-202ENST00000618562 RDH5Q92781 318 aa21.35■■□□□ 1.01
VEGFC-202ENST00000618562 KIRREL1Q96J84 757 aa21.35■■□□□ 1.01
VEGFC-202ENST00000618562 POLEQ07864 2286 aa21.34■■□□□ 1.01
VEGFC-202ENST00000618562 FAM157AC9JC47 383 aa21.34■■□□□ 1.01
VEGFC-202ENST00000618562 HSD17B6O14756 317 aa21.34■■□□□ 1.01
VEGFC-202ENST00000618562 MDH2P40926 338 aaKnown RBP21.34■■□□□ 1.01
VEGFC-202ENST00000618562 NPBWR1P48145 328 aa21.34■■□□□ 1.01
VEGFC-202ENST00000618562 TREM2Q9NZC2 230 aa21.34■■□□□ 1.01
VEGFC-202ENST00000618562 OR2W1Q9Y3N9 320 aa21.34■■□□□ 1.01
VEGFC-202ENST00000618562 TRGV8A0A0C4DH27 118 aa21.33■■□□□ 1.01
VEGFC-202ENST00000618562 AGPAT2O15120 278 aa21.33■■□□□ 1.01
VEGFC-202ENST00000618562 DEGS1O15121 323 aa21.33■■□□□ 1.01
VEGFC-202ENST00000618562 ADAM20O43506 726 aa21.33■■□□□ 1.01
VEGFC-202ENST00000618562 MMP9P14780 707 aa21.33■■□□□ 1.01
VEGFC-202ENST00000618562 CD40P25942 277 aa21.33■■□□□ 1.01
VEGFC-202ENST00000618562 MOB1BQ7L9L4 216 aa21.33■■□□□ 1.01
VEGFC-202ENST00000618562 OR10J5Q8NHC4 309 aa21.33■■□□□ 1.01
VEGFC-202ENST00000618562 DUSP13Q9UII6 198 aa21.33■■□□□ 1.01
VEGFC-202ENST00000618562 NPIPB11E5RHQ5 1161 aa21.33■■□□□ 1
VEGFC-202ENST00000618562 F12P00748 615 aaPredicted RBP21.33■■□□□ 1
VEGFC-202ENST00000618562 ZNF266Q14584 549 aa21.33■■□□□ 1
VEGFC-202ENST00000618562 Q6P435 159 aa21.33■■□□□ 1
VEGFC-202ENST00000618562 H1FOOQ8IZA3 346 aaPredicted RBP21.33■■□□□ 1
VEGFC-202ENST00000618562 TMEM171Q8WVE6 324 aa21.33■■□□□ 1
VEGFC-202ENST00000618562 SLC25A31Q9H0C2 315 aa21.33■■□□□ 1
VEGFC-202ENST00000618562 PLEKHF2Q9H8W4 249 aa21.33■■□□□ 1
VEGFC-202ENST00000618562 LYRM2Q9NU23 88 aaPredicted RBP21.33■■□□□ 1
VEGFC-202ENST00000618562 CACFD1Q9UGQ2 172 aa21.33■■□□□ 1
VEGFC-202ENST00000618562 PITX3O75364 302 aa21.32■■□□□ 1
VEGFC-202ENST00000618562 PGLYRP1O75594 196 aaPredicted RBP21.32■■□□□ 1
VEGFC-202ENST00000618562 WNT2P09544 360 aa21.32■■□□□ 1
VEGFC-202ENST00000618562 SNCAP37840 140 aa21.32■■□□□ 1
VEGFC-202ENST00000618562 CAMLGP49069 296 aa21.32■■□□□ 1
VEGFC-202ENST00000618562 POLR2GP62487 172 aaKnown RBP eCLIP21.32■■□□□ 1
VEGFC-202ENST00000618562 FLI1Q01543 452 aaPredicted RBP21.32■■□□□ 1
VEGFC-202ENST00000618562 MIDNQ504T8 468 aa21.32■■□□□ 1
VEGFC-202ENST00000618562 PRAMEF6Q5VXH4 476 aa21.32■■□□□ 1
VEGFC-202ENST00000618562 ZNF826PQ6ZT77 177 aa21.32■■□□□ 1
VEGFC-202ENST00000618562 CBLN2Q8IUK8 224 aa21.32■■□□□ 1
VEGFC-202ENST00000618562 PRORYQ9H606 182 aa21.32■■□□□ 1
VEGFC-202ENST00000618562 IGHV3-13P01766 116 aa21.32■■□□□ 1
VEGFC-202ENST00000618562 HEXAP06865 529 aa21.32■■□□□ 1
VEGFC-202ENST00000618562 ACAA1P09110 424 aaPredicted RBP21.32■■□□□ 1
VEGFC-202ENST00000618562 HMGN3Q15651 99 aa21.32■■□□□ 1
VEGFC-202ENST00000618562 HFEQ30201 348 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms