RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 MPC2O95563 127 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 PRDX2P32119 198 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 RPL7L1Q6DKI1 246 aaKnown RBP11.95□□□□□ -0.5
CIITA-213ENST00000618327 GGNQ86UU5 652 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 GAPTQ8N292 157 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 C9orf106Q8NAJ2 232 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 FAM57AQ8TBR7 257 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 BCL2L2Q92843 193 aaPredicted RBP11.95□□□□□ -0.5
CIITA-213ENST00000618327 RNF122Q9H9V4 155 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 SLC2A9Q9NRM0 540 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 TMEM14DPA8MWL7 114 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 MOB3BQ86TA1 216 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 AQP3Q92482 292 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 CXorf58Q96LI9 332 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 PRO1933Q9H354 126 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 CCL28Q9NRJ3 127 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 FAM90A10PA6NDY2 464 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 FAM90A18PA6NE21 464 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 FAM90A16PA6NEW6 464 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 FAM90A20PA6NIJ5 464 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 FAM90A8PA6NJQ4 464 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 FAM90A7PA6NKC0 464 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 FAM90A22PA8MWA6 464 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 FAM90A12PA8MX19 464 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 FAM90A5PA8MXJ8 464 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 FAM90A23PA8MXZ1 464 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 FAM90A15PP0C7V4 464 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 FAM90A13PP0C7W8 464 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 FAM90A14PP0C7W9 464 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 FAM90A24PP0C7X0 464 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 ERHP84090 104 aaKnown RBP11.95□□□□□ -0.5
CIITA-213ENST00000618327 TIMM23BQ5SRD1 257 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 SLC16A13Q7RTY0 426 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 PRR13Q9NZ81 148 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 OR2W1Q9Y3N9 320 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 hCG_38984A0A1B0GV85 526 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 HRASP01112 189 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 VAX1Q5SQQ9 334 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 HSD17B13Q7Z5P4 300 aaPredicted RBP11.95□□□□□ -0.5
CIITA-213ENST00000618327 ZIC4Q8N9L1 334 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 DIRC2Q96SL1 478 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 SPRR3Q9UBC9 169 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 COTL1Q14019 142 aa11.94□□□□□ -0.5
CIITA-213ENST00000618327 NSUN5P2Q63ZY6 315 aa11.94□□□□□ -0.5
CIITA-213ENST00000618327 ITLN1Q8WWA0 313 aa11.94□□□□□ -0.5
CIITA-213ENST00000618327 RAXQ9Y2V3 346 aa11.94□□□□□ -0.5
CIITA-213ENST00000618327 A0A1B0GTI1 187 aa11.94□□□□□ -0.5
CIITA-213ENST00000618327 OR5G3P0C626 314 aa11.94□□□□□ -0.5
CIITA-213ENST00000618327 COL10A1Q03692 680 aa11.94□□□□□ -0.5
CIITA-213ENST00000618327 C1orf162Q8NEQ5 155 aaPredicted RBP11.94□□□□□ -0.5
CIITA-213ENST00000618327 UBTD1Q9HAC8 227 aa11.94□□□□□ -0.5
CIITA-213ENST00000618327 DBX1A6NMT0 343 aa11.94□□□□□ -0.5
CIITA-213ENST00000618327 ADH4P08319 380 aa11.94□□□□□ -0.5
CIITA-213ENST00000618327 IGHV1-2P23083 117 aa11.94□□□□□ -0.5
CIITA-213ENST00000618327 ADAD2Q8NCV1 583 aaKnown RBP11.94□□□□□ -0.5
CIITA-213ENST00000618327 PHYHIPLQ96FC7 376 aa11.94□□□□□ -0.5
CIITA-213ENST00000618327 ADGRG7Q96K78 797 aa11.94□□□□□ -0.5
CIITA-213ENST00000618327 ALX4Q9H161 411 aaPredicted RBP11.94□□□□□ -0.5
CIITA-213ENST00000618327 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.94□□□□□ -0.5
CIITA-213ENST00000618327 VSIG4Q9Y279 399 aa11.94□□□□□ -0.5
CIITA-213ENST00000618327 PTBP3O95758 552 aaKnown RBP11.93□□□□□ -0.5
CIITA-213ENST00000618327 OR4A8P0C604 315 aa11.93□□□□□ -0.5
CIITA-213ENST00000618327 C9orf152Q5JTZ5 239 aa11.93□□□□□ -0.5
CIITA-213ENST00000618327 SAXO1Q8IYX7 474 aa11.93□□□□□ -0.5
CIITA-213ENST00000618327 ZNF596Q8TC21 504 aa11.93□□□□□ -0.5
CIITA-213ENST00000618327 Q96M66 194 aa11.93□□□□□ -0.5
CIITA-213ENST00000618327 SLC35B3Q9H1N7 401 aa11.93□□□□□ -0.5
CIITA-213ENST00000618327 LYRM2Q9NU23 88 aaPredicted RBP11.93□□□□□ -0.5
CIITA-213ENST00000618327 CACNG5Q9UF02 275 aa11.93□□□□□ -0.5
CIITA-213ENST00000618327 C7orf66A4D0T2 115 aa11.93□□□□□ -0.5
CIITA-213ENST00000618327 RGS13O14921 159 aa11.93□□□□□ -0.5
CIITA-213ENST00000618327 OR2H2O95918 312 aa11.93□□□□□ -0.5
CIITA-213ENST00000618327 CSN1S1P47710 185 aa11.93□□□□□ -0.5
CIITA-213ENST00000618327 GFRA1P56159 465 aa11.93□□□□□ -0.5
CIITA-213ENST00000618327 NAAAQ02083 359 aa11.93□□□□□ -0.5
CIITA-213ENST00000618327 PLAURQ03405 335 aa11.93□□□□□ -0.5
CIITA-213ENST00000618327 FAM27E3Q08E93 113 aa11.93□□□□□ -0.5
CIITA-213ENST00000618327 LIAT1Q6ZQX7 453 aa11.93□□□□□ -0.5
CIITA-213ENST00000618327 PINX1Q96BK5 328 aaKnown RBP11.93□□□□□ -0.5
CIITA-213ENST00000618327 CHRDL1Q9BU40 450 aa11.93□□□□□ -0.5
CIITA-213ENST00000618327 C1QTNF5Q9BXJ0 243 aa11.93□□□□□ -0.5
CIITA-213ENST00000618327 CA10Q9NS85 328 aa11.93□□□□□ -0.5
CIITA-213ENST00000618327 PPIAL4EA0A075B759 164 aa11.93□□□□□ -0.5
CIITA-213ENST00000618327 LOC102723971A0A1B0GUV8 181 aa11.93□□□□□ -0.5
CIITA-213ENST00000618327 PPIAL4DF5H284 164 aa11.93□□□□□ -0.5
CIITA-213ENST00000618327 PPIAL4FP0DN26 164 aa11.93□□□□□ -0.5
CIITA-213ENST00000618327 ZNF250P15622 560 aa11.93□□□□□ -0.5
CIITA-213ENST00000618327 USF1P22415 310 aaPredicted RBP11.93□□□□□ -0.5
CIITA-213ENST00000618327 OR11H7Q8NGC8 314 aa11.93□□□□□ -0.5
CIITA-213ENST00000618327 RPEQ96AT9 228 aa11.93□□□□□ -0.5
CIITA-213ENST00000618327 RSPO3Q9BXY4 272 aaPredicted RBP11.93□□□□□ -0.5
CIITA-213ENST00000618327 ELOVL5Q9NYP7 299 aa11.93□□□□□ -0.5
CIITA-213ENST00000618327 ZMAT5Q9UDW3 170 aaKnown RBP11.93□□□□□ -0.5
CIITA-213ENST00000618327 HSF4Q9ULV5 492 aa11.93□□□□□ -0.5
CIITA-213ENST00000618327 PPIAL4AQ9Y536 164 aa11.93□□□□□ -0.5
CIITA-213ENST00000618327 COL4A4P53420 1690 aaPredicted RBP11.93□□□□□ -0.5
CIITA-213ENST00000618327 CECR9P0C854 216 aa11.93□□□□□ -0.5
CIITA-213ENST00000618327 SLC25A6P12236 298 aa11.93□□□□□ -0.5
CIITA-213ENST00000618327 MRPS11P82912 194 aaKnown RBP11.93□□□□□ -0.5
CIITA-213ENST00000618327 TMEM255AQ5JRV8 349 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms