RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 SCPEP1Q9HB40 452 aa12.12□□□□□ -0.47
UBXN1-218ENST00000616865 ZNF286AQ9HBT8 521 aa12.12□□□□□ -0.47
UBXN1-218ENST00000616865 CALYQ9NYX4 217 aa12.12□□□□□ -0.47
UBXN1-218ENST00000616865 KPTNQ9Y664 436 aa12.12□□□□□ -0.47
UBXN1-218ENST00000616865 TRBV6-6A0A0A6YYG2 114 aa12.11□□□□□ -0.47
UBXN1-218ENST00000616865 KBTBD11-OT1A0A1B0GTJ5 212 aa12.11□□□□□ -0.47
UBXN1-218ENST00000616865 CLPSL1A2RUU4 121 aa12.11□□□□□ -0.47
UBXN1-218ENST00000616865 MEIS3P1A6NDR6 274 aa12.11□□□□□ -0.47
UBXN1-218ENST00000616865 SULT1C2O00338 296 aa12.11□□□□□ -0.47
UBXN1-218ENST00000616865 ORC5O43913 435 aa12.11□□□□□ -0.47
UBXN1-218ENST00000616865 TOX4O94842 621 aa12.11□□□□□ -0.47
UBXN1-218ENST00000616865 HLA-DQB1P01920 261 aa12.11□□□□□ -0.47
UBXN1-218ENST00000616865 LPLP06858 475 aa12.11□□□□□ -0.47
UBXN1-218ENST00000616865 KIR2DS4P43632 304 aa12.11□□□□□ -0.47
UBXN1-218ENST00000616865 MRPS10P82664 201 aaKnown RBP12.11□□□□□ -0.47
UBXN1-218ENST00000616865 GUCA2AQ02747 115 aa12.11□□□□□ -0.47
UBXN1-218ENST00000616865 KIR2DS1Q14954 304 aa12.11□□□□□ -0.47
UBXN1-218ENST00000616865 LTC4SQ16873 150 aa12.11□□□□□ -0.47
UBXN1-218ENST00000616865 CCDC190Q86UF4 302 aa12.11□□□□□ -0.47
UBXN1-218ENST00000616865 RFESDQ8TAC1 157 aa12.11□□□□□ -0.47
UBXN1-218ENST00000616865 MAFIPQ8WZ33 124 aa12.11□□□□□ -0.47
UBXN1-218ENST00000616865 PCGF1Q9BSM1 259 aa12.11□□□□□ -0.47
UBXN1-218ENST00000616865 TAF9BQ9HBM6 251 aa12.11□□□□□ -0.47
UBXN1-218ENST00000616865 Q9N2K0 584 aa12.11□□□□□ -0.47
UBXN1-218ENST00000616865 ZNF230Q9UIE0 474 aaPredicted RBP12.11□□□□□ -0.47
UBXN1-218ENST00000616865 POMT1Q9Y6A1 747 aa12.11□□□□□ -0.47
UBXN1-218ENST00000616865 TRDCB7Z8K6 153 aa12.1□□□□□ -0.47
UBXN1-218ENST00000616865 TIMM23O14925 209 aa12.1□□□□□ -0.47
UBXN1-218ENST00000616865 SSX5O60225 188 aa12.1□□□□□ -0.47
UBXN1-218ENST00000616865 HBZP02008 142 aa12.1□□□□□ -0.47
UBXN1-218ENST00000616865 RBP4P02753 201 aa12.1□□□□□ -0.47
UBXN1-218ENST00000616865 NFYBP25208 207 aa12.1□□□□□ -0.47
UBXN1-218ENST00000616865 PTBP1P26599 531 aaKnown RBP eCLIP12.1□□□□□ -0.47
UBXN1-218ENST00000616865 SSTR5P35346 364 aa12.1□□□□□ -0.47
UBXN1-218ENST00000616865 ARPC4P59998 168 aa12.1□□□□□ -0.47
UBXN1-218ENST00000616865 ERVFRD-1P60508 538 aa12.1□□□□□ -0.47
UBXN1-218ENST00000616865 RPL15P61313 204 aaKnown RBP12.1□□□□□ -0.47
UBXN1-218ENST00000616865 HLA-DRB3P79483 266 aa12.1□□□□□ -0.47
UBXN1-218ENST00000616865 PRAMEF5Q5TYX0 476 aa12.1□□□□□ -0.47
UBXN1-218ENST00000616865 OR52W1Q6IF63 320 aa12.1□□□□□ -0.47
UBXN1-218ENST00000616865 ZNF880Q6PDB4 577 aa12.1□□□□□ -0.47
UBXN1-218ENST00000616865 TCF23Q7RTU1 214 aa12.1□□□□□ -0.47
UBXN1-218ENST00000616865 ZNF554Q86TJ5 538 aa12.1□□□□□ -0.47
UBXN1-218ENST00000616865 UBALD1Q8TB05 177 aa12.1□□□□□ -0.47
UBXN1-218ENST00000616865 IL1F10Q8WWZ1 152 aa12.1□□□□□ -0.47
UBXN1-218ENST00000616865 ABHD1Q96SE0 405 aa12.1□□□□□ -0.47
UBXN1-218ENST00000616865 METTL8Q9H825 291 aaKnown RBP12.1□□□□□ -0.47
UBXN1-218ENST00000616865 MBNL3Q9NUK0 354 aaKnown RBP12.1□□□□□ -0.47
UBXN1-218ENST00000616865 IDI2-AS1Q9NZ38 188 aa12.1□□□□□ -0.47
UBXN1-218ENST00000616865 MEIOCA2RUB1 952 aa12.09□□□□□ -0.47
UBXN1-218ENST00000616865 C17orf98A8MV24 154 aa12.09□□□□□ -0.47
UBXN1-218ENST00000616865 C12orf77C9JDV5 145 aa12.09□□□□□ -0.47
UBXN1-218ENST00000616865 RBBP9O75884 186 aa12.09□□□□□ -0.47
UBXN1-218ENST00000616865 FCER2P06734 321 aa12.09□□□□□ -0.47
UBXN1-218ENST00000616865 KRTAP10-3P60369 221 aa12.09□□□□□ -0.47
UBXN1-218ENST00000616865 LINC00299Q6ZSB3 139 aa12.09□□□□□ -0.47
UBXN1-218ENST00000616865 C1orf122Q6ZSJ8 110 aa12.09□□□□□ -0.47
UBXN1-218ENST00000616865 VMO1Q7Z5L0 202 aa12.09□□□□□ -0.47
UBXN1-218ENST00000616865 BEST4Q8NFU0 473 aa12.09□□□□□ -0.47
UBXN1-218ENST00000616865 OR52I2Q8NH67 350 aa12.09□□□□□ -0.47
UBXN1-218ENST00000616865 OR1L1Q8NH94 360 aa12.09□□□□□ -0.47
UBXN1-218ENST00000616865 S100ZQ8WXG8 99 aa12.09□□□□□ -0.47
UBXN1-218ENST00000616865 GALMQ96C23 342 aa12.09□□□□□ -0.47
UBXN1-218ENST00000616865 OCSTAMPQ9BR26 566 aa12.09□□□□□ -0.47
UBXN1-218ENST00000616865 HEXA-AS1Q9H8Q6 139 aa12.09□□□□□ -0.47
UBXN1-218ENST00000616865 SESN1Q9Y6P5 492 aa12.09□□□□□ -0.47
UBXN1-218ENST00000616865 GABARAPH6UMI1 98 aa12.08□□□□□ -0.48
UBXN1-218ENST00000616865 SDCBPO00560 298 aaPredicted RBP12.08□□□□□ -0.48
UBXN1-218ENST00000616865 CTDSPLO15194 276 aa12.08□□□□□ -0.48
UBXN1-218ENST00000616865 FABP7O15540 132 aa12.08□□□□□ -0.48
UBXN1-218ENST00000616865 HSPA12AO43301 675 aa12.08□□□□□ -0.48
UBXN1-218ENST00000616865 IGHV1-8P0DP01 117 aa12.08□□□□□ -0.48
UBXN1-218ENST00000616865 MMP9P14780 707 aa12.08□□□□□ -0.48
UBXN1-218ENST00000616865 RCVRNP35243 200 aa12.08□□□□□ -0.48
UBXN1-218ENST00000616865 DLX6P56179 175 aa12.08□□□□□ -0.48
UBXN1-218ENST00000616865 ACTBP60709 375 aa12.08□□□□□ -0.48
UBXN1-218ENST00000616865 ZNF45Q02386 682 aa12.08□□□□□ -0.48
UBXN1-218ENST00000616865 HMGN3Q15651 99 aa12.08□□□□□ -0.48
UBXN1-218ENST00000616865 SRSF7Q16629 238 aaKnown RBP eCLIP12.08□□□□□ -0.48
UBXN1-218ENST00000616865 C17orf58Q2M2W7 97 aa12.08□□□□□ -0.48
UBXN1-218ENST00000616865 TMEM30BQ3MIR4 351 aa12.08□□□□□ -0.48
UBXN1-218ENST00000616865 HEPN1Q6WQI6 88 aa12.08□□□□□ -0.48
UBXN1-218ENST00000616865 ZNF782Q6ZMW2 699 aaPredicted RBP12.08□□□□□ -0.48
UBXN1-218ENST00000616865 HOGA1Q86XE5 327 aa12.08□□□□□ -0.48
UBXN1-218ENST00000616865 GVQW1Q8N7I0 195 aa12.08□□□□□ -0.48
UBXN1-218ENST00000616865 OR10A7Q8NGE5 316 aa12.08□□□□□ -0.48
UBXN1-218ENST00000616865 OR4A4PQ8NGN8 299 aa12.08□□□□□ -0.48
UBXN1-218ENST00000616865 GPX8Q8TED1 209 aa12.08□□□□□ -0.48
UBXN1-218ENST00000616865 SSMEM1Q8WWF3 244 aa12.08□□□□□ -0.48
UBXN1-218ENST00000616865 TBX15Q96SF7 602 aa12.08□□□□□ -0.48
UBXN1-218ENST00000616865 SIRPDQ9H106 197 aa12.08□□□□□ -0.48
UBXN1-218ENST00000616865 SIRT7Q9NRC8 400 aa12.08□□□□□ -0.48
UBXN1-218ENST00000616865 GNG12Q9UBI6 72 aa12.08□□□□□ -0.48
UBXN1-218ENST00000616865 RNF114Q9Y508 228 aa12.08□□□□□ -0.48
UBXN1-218ENST00000616865 CENPVL3A0A0U1RRI6 287 aa12.07□□□□□ -0.48
UBXN1-218ENST00000616865 C15orf65H3BRN8 121 aa12.07□□□□□ -0.48
UBXN1-218ENST00000616865 SCTP09683 121 aa12.07□□□□□ -0.48
UBXN1-218ENST00000616865 CGB3P0DN86 165 aa12.07□□□□□ -0.48
UBXN1-218ENST00000616865 CGB7P0DN87 165 aa12.07□□□□□ -0.48
UBXN1-218ENST00000616865 ETV6P41212 452 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms