RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 CHIAQ9BZP6 476 aa13.43□□□□□ -0.26
IRF1-211ENST00000613424 ABCG5Q9H222 651 aa13.43□□□□□ -0.26
IRF1-211ENST00000613424 OR2S2Q9NQN1 319 aa13.43□□□□□ -0.26
IRF1-211ENST00000613424 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.43□□□□□ -0.26
IRF1-211ENST00000613424 GNG12Q9UBI6 72 aa13.43□□□□□ -0.26
IRF1-211ENST00000613424 MGAT4AQ9UM21 535 aa13.43□□□□□ -0.26
IRF1-211ENST00000613424 ARFRP1Q13795 201 aa13.42□□□□□ -0.26
IRF1-211ENST00000613424 SPCS2Q15005 226 aa13.42□□□□□ -0.26
IRF1-211ENST00000613424 AANATQ16613 207 aa13.42□□□□□ -0.26
IRF1-211ENST00000613424 LRRC75BQ2VPJ9 315 aa13.42□□□□□ -0.26
IRF1-211ENST00000613424 Q3ZCU0 254 aa13.42□□□□□ -0.26
IRF1-211ENST00000613424 MORN2Q502X0 79 aa13.42□□□□□ -0.26
IRF1-211ENST00000613424 HACD4Q5VWC8 232 aa13.42□□□□□ -0.26
IRF1-211ENST00000613424 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.42□□□□□ -0.26
IRF1-211ENST00000613424 SAMD12Q8N8I0 201 aa13.42□□□□□ -0.26
IRF1-211ENST00000613424 C8orf31Q8N9H6 132 aa13.42□□□□□ -0.26
IRF1-211ENST00000613424 IL1F10Q8WWZ1 152 aa13.42□□□□□ -0.26
IRF1-211ENST00000613424 BCL7BQ9BQE9 202 aa13.42□□□□□ -0.26
IRF1-211ENST00000613424 DIABLOQ9NR28 239 aa13.42□□□□□ -0.26
IRF1-211ENST00000613424 COMMD3Q9UBI1 195 aa13.42□□□□□ -0.26
IRF1-211ENST00000613424 TRAV18A0A075B6X5 111 aa13.41□□□□□ -0.26
IRF1-211ENST00000613424 A0A0A6YYH2 397 aa13.41□□□□□ -0.26
IRF1-211ENST00000613424 BTBD17A6NE02 478 aa13.41□□□□□ -0.26
IRF1-211ENST00000613424 A6NJ64 397 aa13.41□□□□□ -0.26
IRF1-211ENST00000613424 VGLL3A8MV65 326 aa13.41□□□□□ -0.26
IRF1-211ENST00000613424 H3BUX3 64 aa13.41□□□□□ -0.26
IRF1-211ENST00000613424 FCGR3AP08637 254 aa13.41□□□□□ -0.26
IRF1-211ENST00000613424 GSTP1P09211 210 aaKnown RBP13.41□□□□□ -0.26
IRF1-211ENST00000613424 SCTP09683 121 aa13.41□□□□□ -0.26
IRF1-211ENST00000613424 ZNF182P17025 639 aaPredicted RBP13.41□□□□□ -0.26
IRF1-211ENST00000613424 TALDO1P37837 337 aa13.41□□□□□ -0.26
IRF1-211ENST00000613424 CEACAM3P40198 252 aa13.41□□□□□ -0.26
IRF1-211ENST00000613424 RAB13P51153 203 aa13.41□□□□□ -0.26
IRF1-211ENST00000613424 ZNF134P52741 427 aa13.41□□□□□ -0.26
IRF1-211ENST00000613424 HLA-DRB3P79483 266 aa13.41□□□□□ -0.26
IRF1-211ENST00000613424 GNMTQ14749 295 aa13.41□□□□□ -0.26
IRF1-211ENST00000613424 UBE2NLQ5JXB2 153 aa13.41□□□□□ -0.26
IRF1-211ENST00000613424 TPTE2P1Q5T6R2 138 aa13.41□□□□□ -0.26
IRF1-211ENST00000613424 IZUMO1Q8IYV9 350 aa13.41□□□□□ -0.26
IRF1-211ENST00000613424 LINC00311Q8N616 119 aa13.41□□□□□ -0.26
IRF1-211ENST00000613424 ZNF439Q8NDP4 499 aa13.41□□□□□ -0.26
IRF1-211ENST00000613424 OR10X1Q8NGY0 326 aa13.41□□□□□ -0.26
IRF1-211ENST00000613424 OR5R1Q8NH85 324 aa13.41□□□□□ -0.26
IRF1-211ENST00000613424 PIFOQ8TCI5 191 aa13.41□□□□□ -0.26
IRF1-211ENST00000613424 ACOT12Q8WYK0 555 aa13.41□□□□□ -0.26
IRF1-211ENST00000613424 S100A16Q96FQ6 103 aaKnown RBP13.41□□□□□ -0.26
IRF1-211ENST00000613424 C19orf24Q9BVV8 132 aa13.41□□□□□ -0.26
IRF1-211ENST00000613424 ZNF230Q9UIE0 474 aaPredicted RBP13.41□□□□□ -0.26
IRF1-211ENST00000613424 JPT1Q9UK76 154 aa13.41□□□□□ -0.26
IRF1-211ENST00000613424 AMMECR1Q9Y4X0 333 aaPredicted RBP13.41□□□□□ -0.26
IRF1-211ENST00000613424 CEPT1Q9Y6K0 416 aa13.41□□□□□ -0.26
IRF1-211ENST00000613424 TMEM235A6NFC5 223 aa13.4□□□□□ -0.26
IRF1-211ENST00000613424 TRDCB7Z8K6 153 aa13.4□□□□□ -0.26
IRF1-211ENST00000613424 SLC31A2O15432 143 aa13.4□□□□□ -0.26
IRF1-211ENST00000613424 YPEL1O60688 119 aa13.4□□□□□ -0.26
IRF1-211ENST00000613424 PPP1CCP36873 323 aaKnown RBP13.4□□□□□ -0.26
IRF1-211ENST00000613424 PNLIPRP3Q17RR3 467 aa13.4□□□□□ -0.26
IRF1-211ENST00000613424 CT45A1Q5HYN5 189 aa13.4□□□□□ -0.26
IRF1-211ENST00000613424 SLC25A48Q6ZT89 311 aaKnown RBP13.4□□□□□ -0.26
IRF1-211ENST00000613424 CT45A3Q8NHU0 189 aa13.4□□□□□ -0.26
IRF1-211ENST00000613424 YPEL2Q96QA6 119 aa13.4□□□□□ -0.26
IRF1-211ENST00000613424 OCSTAMPQ9BR26 566 aa13.4□□□□□ -0.26
IRF1-211ENST00000613424 FAM181BA6NEQ2 426 aa13.39□□□□□ -0.27
IRF1-211ENST00000613424 XRCC3O43542 346 aa13.39□□□□□ -0.27
IRF1-211ENST00000613424 DYNLT3P51808 116 aa13.39□□□□□ -0.27
IRF1-211ENST00000613424 PITPNAQ00169 270 aa13.39□□□□□ -0.27
IRF1-211ENST00000613424 MADCAM1Q13477 382 aa13.39□□□□□ -0.27
IRF1-211ENST00000613424 DIAPH2-AS1Q14236 149 aa13.39□□□□□ -0.27
IRF1-211ENST00000613424 LY6EQ16553 131 aa13.39□□□□□ -0.27
IRF1-211ENST00000613424 LY6G6FQ5SQ64 297 aa13.39□□□□□ -0.27
IRF1-211ENST00000613424 STEAP3Q658P3 488 aa13.39□□□□□ -0.27
IRF1-211ENST00000613424 DTX3Q8N9I9 347 aa13.39□□□□□ -0.27
IRF1-211ENST00000613424 NUDCD2Q8WVJ2 157 aa13.39□□□□□ -0.27
IRF1-211ENST00000613424 MAFIPQ8WZ33 124 aa13.39□□□□□ -0.27
IRF1-211ENST00000613424 ISOC1Q96CN7 298 aa13.39□□□□□ -0.27
IRF1-211ENST00000613424 CMTM3Q96MX0 182 aa13.39□□□□□ -0.27
IRF1-211ENST00000613424 ABCB10Q9NRK6 738 aa13.39□□□□□ -0.27
IRF1-211ENST00000613424 VPREB3Q9UKI3 123 aa13.39□□□□□ -0.27
IRF1-211ENST00000613424 IGKV1-6A0A0C4DH72 117 aa13.38□□□□□ -0.27
IRF1-211ENST00000613424 OOSP1A8MZH6 123 aa13.38□□□□□ -0.27
IRF1-211ENST00000613424 H3BMQ9 156 aa13.38□□□□□ -0.27
IRF1-211ENST00000613424 SSX5O60225 188 aa13.38□□□□□ -0.27
IRF1-211ENST00000613424 GPR137BO60478 399 aa13.38□□□□□ -0.27
IRF1-211ENST00000613424 NOL3O60936 208 aaKnown RBP13.38□□□□□ -0.27
IRF1-211ENST00000613424 RGS11O94810 467 aa13.38□□□□□ -0.27
IRF1-211ENST00000613424 EIF4EP06730 217 aaKnown RBP13.38□□□□□ -0.27
IRF1-211ENST00000613424 GSTT2P0CG29 244 aa13.38□□□□□ -0.27
IRF1-211ENST00000613424 GSTT2BP0CG30 244 aa13.38□□□□□ -0.27
IRF1-211ENST00000613424 DTYMKP23919 212 aa13.38□□□□□ -0.27
IRF1-211ENST00000613424 KIR2DS4P43632 304 aa13.38□□□□□ -0.27
IRF1-211ENST00000613424 GNG2P59768 71 aa13.38□□□□□ -0.27
IRF1-211ENST00000613424 KIR2DS1Q14954 304 aa13.38□□□□□ -0.27
IRF1-211ENST00000613424 SRSF7Q16629 238 aaKnown RBP eCLIP13.38□□□□□ -0.27
IRF1-211ENST00000613424 MZT2AQ6P582 158 aa13.38□□□□□ -0.27
IRF1-211ENST00000613424 OR4A4PQ8NGN8 299 aa13.38□□□□□ -0.27
IRF1-211ENST00000613424 AP3S1Q92572 193 aa13.38□□□□□ -0.27
IRF1-211ENST00000613424 TAF15Q92804 592 aaKnown RBP eCLIP13.38□□□□□ -0.27
IRF1-211ENST00000613424 RPEQ96AT9 228 aa13.38□□□□□ -0.27
IRF1-211ENST00000613424 ST6GALNAC5Q9BVH7 336 aa13.38□□□□□ -0.27
IRF1-211ENST00000613424 AUNIPQ9H7T9 357 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms