RNA–Protein interactions for RNA: ENST00000610733.1

TPM1-233, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 3,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-233ENST00000610733 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.25□□□□□ -1.09
TPM1-233ENST00000610733 A0A1W2PR77 199 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 DFFBO76075 338 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 SEC11BP0C7V7 166 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 MGST1P10620 155 aaKnown RBP8.25□□□□□ -1.09
TPM1-233ENST00000610733 LIFP15018 202 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 NTF3P20783 257 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 ECI1P42126 302 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 FAM3AP98173 230 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 DCAF12Q5T6F0 453 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 CFAP161Q6P656 301 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 Q8WTZ3 238 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 SMIM8Q96KF7 97 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 RPRMQ9NS64 109 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 POMT1Q9Y6A1 747 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 TMEM210A6NLX4 147 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 HSBP1L1C9JCN9 74 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 CLDN34H7C241 214 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 TIMM8AO60220 97 aaPredicted RBP8.25□□□□□ -1.09
TPM1-233ENST00000610733 TRGC1P0CF51 173 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 TCL1AP56279 114 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 RBM11P57052 281 aaKnown RBP8.25□□□□□ -1.09
TPM1-233ENST00000610733 SRPXP78539 464 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 HGFACQ04756 655 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 ZP4Q12836 540 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 IL13RA2Q14627 380 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 BTNL8Q6UX41 500 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 H2BFWTQ7Z2G1 175 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 SSMEM1Q8WWF3 244 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 C14orf144Q96I85 54 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 OR2D2Q9H210 308 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 ZNF552Q9H707 407 aaPredicted RBP8.25□□□□□ -1.09
TPM1-233ENST00000610733 VSIRQ9H7M9 311 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 BOKQ9UMX3 212 aaPredicted RBP8.25□□□□□ -1.09
TPM1-233ENST00000610733 TP53TG5Q9Y2B4 290 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 CHTOPQ9Y3Y2 248 aaKnown RBP8.25□□□□□ -1.09
TPM1-233ENST00000610733 MED13Q9UHV7 2174 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 CXCL1P09341 107 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 SLC25A6P12236 298 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 CD33P20138 364 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 THBS3P49746 956 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 LSM6P62312 80 aaKnown RBP8.25□□□□□ -1.09
TPM1-233ENST00000610733 SLC38A11Q08AI6 406 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 SPEM2Q0P670 501 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 FFAR4Q5NUL3 377 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 FAM78BQ5VT40 261 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 DTX1Q86Y01 620 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 BAGE3Q86Y29 109 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 BAGE2Q86Y30 109 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 PLEKHA3Q9HB20 300 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 ENY2Q9NPA8 101 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 TMEM38BQ9NVV0 291 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 ZNF107Q9UII5 783 aaPredicted RBP8.25□□□□□ -1.09
TPM1-233ENST00000610733 ZDHHC8Q9ULC8 765 aa8.25□□□□□ -1.09
TPM1-233ENST00000610733 PAGE4O60829 102 aa8.24□□□□□ -1.09
TPM1-233ENST00000610733 RHBDL1O75783 438 aa8.24□□□□□ -1.09
TPM1-233ENST00000610733 TOX4O94842 621 aa8.24□□□□□ -1.09
TPM1-233ENST00000610733 VDAC1P21796 283 aa8.24□□□□□ -1.09
TPM1-233ENST00000610733 SUCLG1P53597 346 aaKnown RBP8.24□□□□□ -1.09
TPM1-233ENST00000610733 LINC00205P59089 165 aa8.24□□□□□ -1.09
TPM1-233ENST00000610733 C2orf88Q9BSF0 95 aa8.24□□□□□ -1.09
TPM1-233ENST00000610733 PSG11Q9UQ72 335 aa8.24□□□□□ -1.09
TPM1-233ENST00000610733 HS3ST3B1Q9Y662 390 aa8.24□□□□□ -1.09
TPM1-233ENST00000610733 TRDCB7Z8K6 153 aa8.24□□□□□ -1.09
TPM1-233ENST00000610733 SYNGR2O43760 224 aa8.24□□□□□ -1.09
TPM1-233ENST00000610733 HSPB1P04792 205 aaKnown RBP8.24□□□□□ -1.09
TPM1-233ENST00000610733 CD55P08174 381 aa8.24□□□□□ -1.09
TPM1-233ENST00000610733 QRFPP83859 136 aa8.24□□□□□ -1.09
TPM1-233ENST00000610733 ZNF385CQ66K41 422 aaPredicted RBP8.24□□□□□ -1.09
TPM1-233ENST00000610733 FAM58AQ8N1B3 248 aa8.24□□□□□ -1.09
TPM1-233ENST00000610733 OR5D13Q8NGL4 314 aa8.24□□□□□ -1.09
TPM1-233ENST00000610733 ABHD14BQ96IU4 210 aa8.24□□□□□ -1.09
TPM1-233ENST00000610733 PCGF1Q9BSM1 259 aa8.24□□□□□ -1.09
TPM1-233ENST00000610733 CEP295Q9C0D2 2601 aa8.24□□□□□ -1.09
TPM1-233ENST00000610733 AGFG2O95081 481 aa8.24□□□□□ -1.09
TPM1-233ENST00000610733 GALR1P47211 349 aa8.24□□□□□ -1.09
TPM1-233ENST00000610733 RAC3P60763 192 aa8.24□□□□□ -1.09
TPM1-233ENST00000610733 AESQ08117 197 aa8.24□□□□□ -1.09
TPM1-233ENST00000610733 FOXO1Q12778 655 aa8.24□□□□□ -1.09
TPM1-233ENST00000610733 EXT1Q16394 746 aa8.24□□□□□ -1.09
TPM1-233ENST00000610733 PRAMEF5Q5TYX0 476 aa8.24□□□□□ -1.09
TPM1-233ENST00000610733 PRAMEF6Q5VXH4 476 aa8.24□□□□□ -1.09
TPM1-233ENST00000610733 FAM131CQ96AQ9 280 aa8.24□□□□□ -1.09
TPM1-233ENST00000610733 GOLT1BQ9Y3E0 138 aa8.24□□□□□ -1.09
TPM1-233ENST00000610733 PGPEP1LA6NFU8 196 aa8.23□□□□□ -1.09
TPM1-233ENST00000610733 CSRP1P21291 193 aaKnown RBP8.23□□□□□ -1.09
TPM1-233ENST00000610733 EPHA8P29322 1005 aaPredicted RBP8.23□□□□□ -1.09
TPM1-233ENST00000610733 CCL11P51671 97 aa8.23□□□□□ -1.09
TPM1-233ENST00000610733 MRPL49Q13405 166 aaKnown RBP8.23□□□□□ -1.09
TPM1-233ENST00000610733 FAM53AQ6NSI3 398 aaPredicted RBP8.23□□□□□ -1.09
TPM1-233ENST00000610733 VKORC1L1Q8N0U8 176 aa8.23□□□□□ -1.09
TPM1-233ENST00000610733 OR10P1Q8NGE3 313 aa8.23□□□□□ -1.09
TPM1-233ENST00000610733 RBKSQ9H477 322 aa8.23□□□□□ -1.09
TPM1-233ENST00000610733 GPR35Q9HC97 309 aa8.23□□□□□ -1.09
TPM1-233ENST00000610733 GLRX2Q9NS18 164 aa8.23□□□□□ -1.09
TPM1-233ENST00000610733 OR8U8P0C7N1 319 aa8.23□□□□□ -1.09
TPM1-233ENST00000610733 EIF3IQ13347 325 aaKnown RBP8.23□□□□□ -1.09
TPM1-233ENST00000610733 GPR146Q96CH1 333 aa8.23□□□□□ -1.09
TPM1-233ENST00000610733 BOD1Q96IK1 185 aa8.23□□□□□ -1.09
TPM1-233ENST00000610733 CHCHD2Q9Y6H1 151 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms