RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 ADIRFQ15847 76 aa19.05■□□□□ 0.64
SHANK2-220ENST00000608988 ACOT6Q3I5F7 207 aaPredicted RBP19.05■□□□□ 0.64
SHANK2-220ENST00000608988 GUSBP11Q6P575 273 aa19.05■□□□□ 0.64
SHANK2-220ENST00000608988 MOB1BQ7L9L4 216 aa19.05■□□□□ 0.64
SHANK2-220ENST00000608988 OR10V1Q8NGI7 309 aa19.05■□□□□ 0.64
SHANK2-220ENST00000608988 OR51G1Q8NGK1 321 aa19.05■□□□□ 0.64
SHANK2-220ENST00000608988 ADGRG7Q96K78 797 aa19.05■□□□□ 0.64
SHANK2-220ENST00000608988 MANBALQ9NQG1 85 aa19.05■□□□□ 0.64
SHANK2-220ENST00000608988 SLC39A9Q9NUM3 307 aa19.05■□□□□ 0.64
SHANK2-220ENST00000608988 MRPS18CQ9Y3D5 142 aaKnown RBP19.05■□□□□ 0.64
SHANK2-220ENST00000608988 SLC33A1O00400 549 aaPredicted RBP19.05■□□□□ 0.64
SHANK2-220ENST00000608988 MBP02144 154 aa19.05■□□□□ 0.64
SHANK2-220ENST00000608988 CCKARP32238 428 aa19.05■□□□□ 0.64
SHANK2-220ENST00000608988 APLNRP35414 380 aa19.05■□□□□ 0.64
SHANK2-220ENST00000608988 SRP14P37108 136 aaKnown RBP19.05■□□□□ 0.64
SHANK2-220ENST00000608988 PSMB3P49720 205 aa19.05■□□□□ 0.64
SHANK2-220ENST00000608988 TCEAL6Q6IPX3 200 aa19.05■□□□□ 0.64
SHANK2-220ENST00000608988 PSMF1Q92530 271 aa19.05■□□□□ 0.64
SHANK2-220ENST00000608988 TAF15Q92804 592 aaKnown RBP eCLIP19.05■□□□□ 0.64
SHANK2-220ENST00000608988 BTF3L4Q96K17 158 aa19.05■□□□□ 0.64
SHANK2-220ENST00000608988 RBKSQ9H477 322 aa19.05■□□□□ 0.64
SHANK2-220ENST00000608988 LIN7CQ9NUP9 197 aaKnown RBP19.05■□□□□ 0.64
SHANK2-220ENST00000608988 MTCH1Q9NZJ7 389 aa19.05■□□□□ 0.64
SHANK2-220ENST00000608988 EML6Q6ZMW3 1958 aa19.04■□□□□ 0.64
SHANK2-220ENST00000608988 GON4LQ3T8J9 2241 aa19.04■□□□□ 0.64
SHANK2-220ENST00000608988 CYTIPO60759 359 aa19.04■□□□□ 0.64
SHANK2-220ENST00000608988 HRASP01112 189 aa19.04■□□□□ 0.64
SHANK2-220ENST00000608988 TYMSP04818 313 aa19.04■□□□□ 0.64
SHANK2-220ENST00000608988 GALR1P47211 349 aa19.04■□□□□ 0.64
SHANK2-220ENST00000608988 FGF8P55075 233 aaPredicted RBP19.04■□□□□ 0.64
SHANK2-220ENST00000608988 ARL16Q0P5N6 197 aa19.04■□□□□ 0.64
SHANK2-220ENST00000608988 ATP6V1FQ16864 119 aa19.04■□□□□ 0.64
SHANK2-220ENST00000608988 SSX7Q7RTT5 188 aa19.04■□□□□ 0.64
SHANK2-220ENST00000608988 MRPL21Q7Z2W9 205 aaKnown RBP19.04■□□□□ 0.64
SHANK2-220ENST00000608988 HAPLN4Q86UW8 402 aa19.04■□□□□ 0.64
SHANK2-220ENST00000608988 LHX4Q969G2 390 aa19.04■□□□□ 0.64
SHANK2-220ENST00000608988 HIST1H2AAQ96QV6 131 aa19.04■□□□□ 0.64
SHANK2-220ENST00000608988 FGF23Q9GZV9 251 aaPredicted RBP19.04■□□□□ 0.64
SHANK2-220ENST00000608988 GAB2Q9UQC2 676 aa19.04■□□□□ 0.64
SHANK2-220ENST00000608988 XKRY2A2RUG3 117 aa19.03■□□□□ 0.64
SHANK2-220ENST00000608988 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP19.03■□□□□ 0.64
SHANK2-220ENST00000608988 CXCL13O43927 109 aa19.03■□□□□ 0.64
SHANK2-220ENST00000608988 UMODP07911 640 aa19.03■□□□□ 0.64
SHANK2-220ENST00000608988 GPM6AP51674 278 aa19.03■□□□□ 0.64
SHANK2-220ENST00000608988 CPEB3Q8NE35 698 aaKnown RBP19.03■□□□□ 0.64
SHANK2-220ENST00000608988 OR51H1Q8NH63 302 aa19.03■□□□□ 0.64
SHANK2-220ENST00000608988 LINC00470Q9BZP3 86 aa19.03■□□□□ 0.64
SHANK2-220ENST00000608988 LAMP3Q9UQV4 416 aa19.03■□□□□ 0.64
SHANK2-220ENST00000608988 G3V3Y1 287 aa19.03■□□□□ 0.64
SHANK2-220ENST00000608988 VENTXO95231 258 aa19.03■□□□□ 0.64
SHANK2-220ENST00000608988 RPL23P62829 140 aaKnown RBP19.03■□□□□ 0.64
SHANK2-220ENST00000608988 Q6ZRM9 215 aa19.03■□□□□ 0.64
SHANK2-220ENST00000608988 APOBEC3DQ96AK3 386 aaPredicted RBP19.03■□□□□ 0.64
SHANK2-220ENST00000608988 LURAP1Q96LR2 239 aa19.03■□□□□ 0.64
SHANK2-220ENST00000608988 OR4C12Q96R67 309 aa19.03■□□□□ 0.64
SHANK2-220ENST00000608988 ERRFI1Q9UJM3 462 aaPredicted RBP19.03■□□□□ 0.64
SHANK2-220ENST00000608988 GGCTO75223 188 aaKnown RBP19.02■□□□□ 0.64
SHANK2-220ENST00000608988 IGKV1-39P01597 117 aa19.02■□□□□ 0.64
SHANK2-220ENST00000608988 IGKV1D-39P04432 117 aa19.02■□□□□ 0.64
SHANK2-220ENST00000608988 ZNF468Q5VIY5 522 aaPredicted RBP19.02■□□□□ 0.64
SHANK2-220ENST00000608988 UNQ6494/PRO21346Q6UXR6 183 aa19.02■□□□□ 0.64
SHANK2-220ENST00000608988 C5orf24Q7Z6I8 188 aa19.02■□□□□ 0.64
SHANK2-220ENST00000608988 CISD2Q8N5K1 135 aaKnown RBP19.02■□□□□ 0.64
SHANK2-220ENST00000608988 AGBL5Q8NDL9 886 aa19.02■□□□□ 0.64
SHANK2-220ENST00000608988 OR10D3Q8NH80 312 aa19.02■□□□□ 0.64
SHANK2-220ENST00000608988 TMEM9BQ9NQ34 198 aa19.02■□□□□ 0.64
SHANK2-220ENST00000608988 TNRC6AQ8NDV7 1962 aaKnown RBP19.02■□□□□ 0.63
SHANK2-220ENST00000608988 LY6G6EA0A0G2JKS1 128 aa19.01■□□□□ 0.63
SHANK2-220ENST00000608988 CTXND1A0A1B0GTU2 59 aa19.01■□□□□ 0.63
SHANK2-220ENST00000608988 SS18L1O75177 396 aaPredicted RBP19.01■□□□□ 0.63
SHANK2-220ENST00000608988 IGKV1-5P01602 117 aa19.01■□□□□ 0.63
SHANK2-220ENST00000608988 P04436 131 aa19.01■□□□□ 0.63
SHANK2-220ENST00000608988 IAPPP10997 89 aa19.01■□□□□ 0.63
SHANK2-220ENST00000608988 SELLP14151 372 aa19.01■□□□□ 0.63
SHANK2-220ENST00000608988 NDUFB7P17568 137 aa19.01■□□□□ 0.63
SHANK2-220ENST00000608988 HOXA6P31267 233 aa19.01■□□□□ 0.63
SHANK2-220ENST00000608988 SLC38A11Q08AI6 406 aa19.01■□□□□ 0.63
SHANK2-220ENST00000608988 ACTL10Q5JWF8 245 aa19.01■□□□□ 0.63
SHANK2-220ENST00000608988 BATF2Q8N1L9 274 aa19.01■□□□□ 0.63
SHANK2-220ENST00000608988 TMEM18Q96B42 140 aa19.01■□□□□ 0.63
SHANK2-220ENST00000608988 OR51I2Q9H344 312 aa19.01■□□□□ 0.63
SHANK2-220ENST00000608988 U3KQA8 63 aa19.01■□□□□ 0.63
SHANK2-220ENST00000608988 RNF212BA8MTL3 300 aa19.01■□□□□ 0.63
SHANK2-220ENST00000608988 EPHA8P29322 1005 aaPredicted RBP19.01■□□□□ 0.63
SHANK2-220ENST00000608988 HNF4GQ14541 408 aa19.01■□□□□ 0.63
SHANK2-220ENST00000608988 TMEM14EPQ6UXP3 125 aa19.01■□□□□ 0.63
SHANK2-220ENST00000608988 YRDCQ86U90 279 aaKnown RBP19.01■□□□□ 0.63
SHANK2-220ENST00000608988 ZNF664Q8N3J9 261 aa19.01■□□□□ 0.63
SHANK2-220ENST00000608988 HS3ST6Q96QI5 342 aa19.01■□□□□ 0.63
SHANK2-220ENST00000608988 AKIRIN1Q9H9L7 192 aaPredicted RBP19.01■□□□□ 0.63
SHANK2-220ENST00000608988 OR5B21A6NL26 309 aa19■□□□□ 0.63
SHANK2-220ENST00000608988 ZNF66Q6ZN08 573 aa19■□□□□ 0.63
SHANK2-220ENST00000608988 ZNF573Q86YE8 665 aa19■□□□□ 0.63
SHANK2-220ENST00000608988 DNAH14Q0VDD8 3507 aa19■□□□□ 0.63
SHANK2-220ENST00000608988 LCN2P80188 198 aa18.99■□□□□ 0.63
SHANK2-220ENST00000608988 SLC10A1Q14973 349 aa18.99■□□□□ 0.63
SHANK2-220ENST00000608988 ZNF124Q15973 351 aa18.99■□□□□ 0.63
SHANK2-220ENST00000608988 PKIBQ9C010 78 aa18.99■□□□□ 0.63
SHANK2-220ENST00000608988 IGKV3D-15A0A087WSY6 115 aa18.99■□□□□ 0.63
SHANK2-220ENST00000608988 NUBP1P53384 320 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms