RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 FREM3P0C091 2139 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 CPAMD8Q8IZJ3 1885 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 TDRD6O60522 2096 aaKnown RBP3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 ATG2BQ96BY7 2078 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 MYOFQ9NZM1 2061 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 ALPK2Q86TB3 2170 aa3.46□□□□□ -1.85
HMGB1P50-201ENST00000605814 LINC01553A4QN01 128 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 IGLON5A6NGN9 336 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 VSTM2BA6NLU5 285 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 ADM5C9JUS6 153 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 DEGS1O15121 323 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 ZNF737O75373 536 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 CGAP01215 116 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 TNFP01375 233 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 IFNA5P01569 189 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 TTRP02766 147 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 HPNP05981 417 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 CD55P08174 381 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 SLC35E2P0CK97 266 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 ZNF728P0DKX0 622 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 ANOS1P23352 680 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 ZFP36P26651 326 aaKnown RBP3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 IL3RAP26951 378 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 CMPK1P30085 196 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 PEBP1P30086 187 aaKnown RBP3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 GRPRP30550 384 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 GCH1P30793 250 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 CD52P31358 61 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 NKX2-1P43699 371 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 GPR1P46091 355 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 LGALS7P47929 136 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 SLC6A8P48029 635 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 PSMB3P49720 205 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 THBS3P49746 956 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 DYNLT3P51808 116 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 HNRNPA3P51991 378 aaKnown RBP3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 PAX9P55771 341 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 BIDP55957 195 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 PIGPP57054 158 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 KRTAP10-11P60412 298 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 ERVS71-1P61550 626 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 RPS15AP62244 130 aaKnown RBP3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 RHOBP62745 196 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 BTN3A2P78410 334 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 MEF2BQ02080 365 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 EGR4Q05215 589 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 CD69Q07108 199 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 HYAL1Q12794 435 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 SGCBQ16585 318 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 LRRC75BQ2VPJ9 315 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 SMIM21Q3B7S5 101 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 SPATA45Q537H7 98 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 KRTCAP3Q53RY4 240 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR10J3Q5JRS4 329 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 CLLU1OSQ5K130 101 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 GLIPR1L1Q6UWM5 242 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 COX15Q7KZN9 410 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 DEFB128Q7Z7B8 93 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 NIT1Q86X76 327 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 MTURNQ8N3F0 131 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 DEFB125Q8N687 156 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 VN1R2Q8NFZ6 395 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR4F17Q8NGA8 305 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR52R1Q8NGF1 315 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR52M1Q8NGK5 317 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR4P4Q8NGL7 312 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR5C1Q8NGR4 320 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 ABHD3Q8WU67 409 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 SOCS4Q8WXH5 440 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 TMEM234Q8WY98 164 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR5P3Q8WZ94 311 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 ARHGAP5-AS1Q96IT6 56 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 SIGLEC12Q96PQ1 595 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 UHRF2Q96PU4 802 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR4F4Q96R69 305 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 RAB40CQ96S21 281 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 TXN2Q99757 166 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 APOOQ9BUR5 198 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 ST6GALNAC5Q9BVH7 336 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 VN1R1Q9GZP7 353 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 NECAP2Q9NVZ3 263 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 FAM206AQ9NX38 181 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 ZNF586Q9NXT0 402 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 ZNF581Q9P0T4 197 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 GNG13Q9P2W3 67 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 CLN8Q9UBY8 286 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 ANXA10Q9UJ72 324 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 CLEC4EQ9ULY5 219 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 LY96Q9Y6Y9 160 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 ADAMTS9Q9P2N4 1935 aa3.46□□□□□ -1.86
HMGB1P50-201ENST00000605814 DOCK11Q5JSL3 2073 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 PHF3Q92576 2039 aaKnown RBP3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 TRAV36DV7A0A075B6V5 113 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 TRAV9-2A0A087WT02 112 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 NPIPA5A0A0B4J1W7 369 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 A0A0U1RQK1 487 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 ZNF320A2RRD8 509 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 TMEM189A5PLL7 270 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 ANKUB1A6NFN9 424 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 DPRXA6NFQ7 191 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms