RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 AMMECR1LQ6DCA0 310 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 BHLHA15Q7RTS1 189 aaPredicted RBP8.44□□□□□ -1.06
CSMD1-217ENST00000602723 WDR34Q96EX3 536 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 NCKAP5O14513 1909 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 KLK10O43240 276 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 GABRG2P18507 467 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 LOC107984156A0A0G2JMH3 177 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 DNLZQ5SXM8 178 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 LYZL2Q7Z4W2 148 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 ARL17AQ8IVW1 177 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 OR10AC1Q8NH08 325 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 HSPB9Q9BQS6 159 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 SAP30LQ9HAJ7 183 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 SLC52A3Q9NQ40 469 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 FAM90A27PA6NNH2 459 aa8.43□□□□□ -1.06
CSMD1-217ENST00000602723 RELBQ01201 579 aa8.43□□□□□ -1.06
CSMD1-217ENST00000602723 ACER2Q5QJU3 275 aa8.43□□□□□ -1.06
CSMD1-217ENST00000602723 TBX21Q9UL17 535 aa8.43□□□□□ -1.06
CSMD1-217ENST00000602723 LRP5O75197 1615 aa8.43□□□□□ -1.06
CSMD1-217ENST00000602723 OR4A8P0C604 315 aa8.43□□□□□ -1.06
CSMD1-217ENST00000602723 EWSR1Q01844 656 aaKnown RBP eCLIP8.43□□□□□ -1.06
CSMD1-217ENST00000602723 TMEM211Q6ICI0 200 aa8.43□□□□□ -1.06
CSMD1-217ENST00000602723 MRPL30Q8TCC3 161 aaKnown RBP8.43□□□□□ -1.06
CSMD1-217ENST00000602723 CES1P1Q9UKY3 287 aa8.43□□□□□ -1.06
CSMD1-217ENST00000602723 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.43□□□□□ -1.06
CSMD1-217ENST00000602723 COL19A1Q14993 1142 aa8.43□□□□□ -1.06
CSMD1-217ENST00000602723 MRPL24Q96A35 216 aaKnown RBP8.43□□□□□ -1.06
CSMD1-217ENST00000602723 HARBI1Q96MB7 349 aa8.43□□□□□ -1.06
CSMD1-217ENST00000602723 MRPL13Q9BYD1 178 aaKnown RBP8.43□□□□□ -1.06
CSMD1-217ENST00000602723 SMDT1Q9H4I9 107 aa8.43□□□□□ -1.06
CSMD1-217ENST00000602723 SBF2Q86WG5 1849 aa8.43□□□□□ -1.06
CSMD1-217ENST00000602723 UQCRFS1P47985 274 aa8.43□□□□□ -1.06
CSMD1-217ENST00000602723 SLC25A30Q5SVS4 291 aa8.43□□□□□ -1.06
CSMD1-217ENST00000602723 PATE4P0C8F1 98 aa8.43□□□□□ -1.06
CSMD1-217ENST00000602723 COMPP49747 757 aaPredicted RBP8.43□□□□□ -1.06
CSMD1-217ENST00000602723 TAS2R60P59551 318 aa8.43□□□□□ -1.06
CSMD1-217ENST00000602723 AMER3Q8N944 861 aa8.43□□□□□ -1.06
CSMD1-217ENST00000602723 OIT3Q8WWZ8 545 aa8.43□□□□□ -1.06
CSMD1-217ENST00000602723 ZNF831Q5JPB2 1677 aa8.43□□□□□ -1.06
CSMD1-217ENST00000602723 GAGE10A6NGK3 116 aa8.43□□□□□ -1.06
CSMD1-217ENST00000602723 LINC01555Q8NAE3 123 aa8.43□□□□□ -1.06
CSMD1-217ENST00000602723 RSG1Q9BU20 258 aa8.43□□□□□ -1.06
CSMD1-217ENST00000602723 OR51B2Q9Y5P1 312 aa8.43□□□□□ -1.06
CSMD1-217ENST00000602723 SLC35B1P78383 322 aa8.43□□□□□ -1.06
CSMD1-217ENST00000602723 H1FOOQ8IZA3 346 aaPredicted RBP8.43□□□□□ -1.06
CSMD1-217ENST00000602723 OR1L8Q8NGR8 309 aa8.43□□□□□ -1.06
CSMD1-217ENST00000602723 COL25A1Q9BXS0 654 aaPredicted RBP8.43□□□□□ -1.06
CSMD1-217ENST00000602723 F12P00748 615 aaPredicted RBP8.43□□□□□ -1.06
CSMD1-217ENST00000602723 MMP9P14780 707 aa8.43□□□□□ -1.06
CSMD1-217ENST00000602723 TMEM196Q5HYL7 178 aa8.43□□□□□ -1.06
CSMD1-217ENST00000602723 SPANXN1Q5VSR9 72 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 PCOLCE2Q9UKZ9 415 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 LIPT2A6NK58 231 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 KCNAB3O43448 404 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 TEPPQ6URK8 271 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 HIGD1AQ9Y241 93 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 TMSB15BA0A087X1C1 80 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 RAB29O14966 203 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 PEX11BO96011 259 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 PRSS12P56730 875 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 LSM6P62312 80 aaKnown RBP8.42□□□□□ -1.06
CSMD1-217ENST00000602723 CHST5Q9GZS9 411 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 SCN10AQ9Y5Y9 1956 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 DHRS7CA6NNS2 312 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 CDK2AP1O14519 115 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 OVCH2Q7RTZ1 564 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 C1RLQ9NZP8 487 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 OTOGLQ3ZCN5 2332 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 BTF3P20290 206 aaKnown RBP8.42□□□□□ -1.06
CSMD1-217ENST00000602723 SRD5A2P31213 254 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 C19orf57Q0VDD7 668 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 TRA2AQ13595 282 aaKnown RBP eCLIP8.42□□□□□ -1.06
CSMD1-217ENST00000602723 ADIPOQQ15848 244 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 ECSCRQ19T08 205 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 PAXXQ9BUH6 204 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 GLRX2Q9NS18 164 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 TREM2Q9NZC2 230 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 UQCR10Q9UDW1 63 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 KIR3DL2P43630 455 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 PAFAH1B2P68402 229 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 SSPNQ14714 243 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 CDX2Q99626 313 aaPredicted RBP8.42□□□□□ -1.06
CSMD1-217ENST00000602723 OR2J1Q9GZK6 312 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 RAC3P60763 192 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 TP53I13Q8NBR0 393 aaPredicted RBP8.42□□□□□ -1.06
CSMD1-217ENST00000602723 P2RX4Q99571 388 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 OR2H1Q9GZK4 316 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 MT-CO3P00414 261 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 ZNF519Q8TB69 540 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 MUC1P15941 1255 aaPredicted RBP8.42□□□□□ -1.06
CSMD1-217ENST00000602723 EIF3IQ13347 325 aaKnown RBP8.42□□□□□ -1.06
CSMD1-217ENST00000602723 GUSBP11Q6P575 273 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 CBLN3Q6UW01 205 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 OR4B1Q8NGF8 309 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 OR8B3Q8NGG8 313 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 RAB1CQ92928 201 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 OR8B2Q96RD0 313 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 CCL28Q9NRJ3 127 aa8.42□□□□□ -1.06
CSMD1-217ENST00000602723 TCF20Q9UGU0 1960 aaKnown RBP8.41□□□□□ -1.06
CSMD1-217ENST00000602723 PSG2P11465 335 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms