RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 TEX13DA0A0J9YY54 714 aaPredicted RBP14.9□□□□□ -0.02
VRK3-225ENST00000601912 GPR37O15354 613 aa14.9□□□□□ -0.02
VRK3-225ENST00000601912 CGB3P0DN86 165 aa14.9□□□□□ -0.02
VRK3-225ENST00000601912 CGB7P0DN87 165 aa14.9□□□□□ -0.02
VRK3-225ENST00000601912 S100GP29377 79 aa14.9□□□□□ -0.02
VRK3-225ENST00000601912 FCN2Q15485 313 aa14.9□□□□□ -0.02
VRK3-225ENST00000601912 SGPP2Q8IWX5 399 aa14.9□□□□□ -0.02
VRK3-225ENST00000601912 C12orf45Q8N5I9 185 aaPredicted RBP14.9□□□□□ -0.02
VRK3-225ENST00000601912 UXS1Q8NBZ7 420 aa14.9□□□□□ -0.02
VRK3-225ENST00000601912 OR8B3Q8NGG8 313 aa14.9□□□□□ -0.02
VRK3-225ENST00000601912 OR8B2Q96RD0 313 aa14.9□□□□□ -0.02
VRK3-225ENST00000601912 TOLLIPQ9H0E2 274 aa14.9□□□□□ -0.02
VRK3-225ENST00000601912 GAL3ST2Q9H3Q3 398 aa14.9□□□□□ -0.02
VRK3-225ENST00000601912 TAS2R3Q9NYW6 316 aa14.9□□□□□ -0.02
VRK3-225ENST00000601912 JPT1Q9UK76 154 aa14.9□□□□□ -0.02
VRK3-225ENST00000601912 IGKV1D-13A0A0B4J2D9 117 aa14.89□□□□□ -0.03
VRK3-225ENST00000601912 F2RL2O00254 374 aa14.89□□□□□ -0.03
VRK3-225ENST00000601912 GPR31O00270 319 aa14.89□□□□□ -0.03
VRK3-225ENST00000601912 IGKV1-13P0DP09 117 aa14.89□□□□□ -0.03
VRK3-225ENST00000601912 GNRHRP30968 328 aa14.89□□□□□ -0.03
VRK3-225ENST00000601912 CMTM1Q8IZ96 169 aa14.89□□□□□ -0.03
VRK3-225ENST00000601912 FAM185AQ8N0U4 392 aa14.89□□□□□ -0.03
VRK3-225ENST00000601912 NEIL1Q96FI4 390 aaPredicted RBP14.89□□□□□ -0.03
VRK3-225ENST00000601912 PHB2Q99623 299 aa14.89□□□□□ -0.03
VRK3-225ENST00000601912 SLC2A9Q9NRM0 540 aa14.89□□□□□ -0.03
VRK3-225ENST00000601912 C19orf12Q9NSK7 152 aa14.89□□□□□ -0.03
VRK3-225ENST00000601912 GNG12Q9UBI6 72 aa14.89□□□□□ -0.03
VRK3-225ENST00000601912 TRBV23-1A0A0A0MS06 115 aa14.88□□□□□ -0.03
VRK3-225ENST00000601912 FCN3O75636 299 aa14.88□□□□□ -0.03
VRK3-225ENST00000601912 RGS11O94810 467 aa14.88□□□□□ -0.03
VRK3-225ENST00000601912 SFT2D2O95562 160 aa14.88□□□□□ -0.03
VRK3-225ENST00000601912 DUS4LO95620 317 aaKnown RBP14.88□□□□□ -0.03
VRK3-225ENST00000601912 CD34P28906 385 aa14.88□□□□□ -0.03
VRK3-225ENST00000601912 LTC4SQ16873 150 aa14.88□□□□□ -0.03
VRK3-225ENST00000601912 C17orf58Q2M2W7 97 aa14.88□□□□□ -0.03
VRK3-225ENST00000601912 TMEM30BQ3MIR4 351 aa14.88□□□□□ -0.03
VRK3-225ENST00000601912 PHLDA2Q53GA4 152 aa14.88□□□□□ -0.03
VRK3-225ENST00000601912 ZNF295-AS1Q8N0V1 137 aa14.88□□□□□ -0.03
VRK3-225ENST00000601912 CASTOR1Q8WTX7 329 aa14.88□□□□□ -0.03
VRK3-225ENST00000601912 RTN4IP1Q8WWV3 396 aaPredicted RBP14.88□□□□□ -0.03
VRK3-225ENST00000601912 KCNIP3Q9Y2W7 256 aa14.88□□□□□ -0.03
VRK3-225ENST00000601912 IGHV3-43A0A0B4J1X8 118 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 CRYM-AS1A6NIL9 109 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 HSD17B6O14756 317 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 WNT2P09544 360 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 SULT1A3P0DMM9 295 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 SULT1A4P0DMN0 295 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 IGHV3-43DP0DP04 118 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 PPP1CCP36873 323 aaKnown RBP14.87□□□□□ -0.03
VRK3-225ENST00000601912 CD83Q01151 205 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 GNMTQ14749 295 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 TMEM200BQ69YZ2 307 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 TCF23Q7RTU1 214 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 MITD1Q8WV92 249 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 EDARADDQ8WWZ3 215 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 ZNF714Q96N38 554 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 LINC00574Q9H8X3 128 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 CCL28Q9NRJ3 127 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 AKAP6Q13023 2319 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 DSCAML1Q8TD84 2053 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 YPEL1O60688 119 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 IFNA2P01563 188 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 IGHV4-39P01824 125 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 HNRNPCP07910 306 aaKnown RBP eCLIP14.87□□□□□ -0.03
VRK3-225ENST00000601912 OR8U9P0C7N5 309 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 ANXA3P12429 323 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 OMGP23515 440 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 ZNF841Q6ZN19 808 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 ZNF818PQ6ZRF7 136 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 OR2AK2Q8NG84 335 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 OR11H7Q8NGC8 314 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 OR8U1Q8NH10 309 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 COQ8AQ8NI60 647 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 FAM216AQ8WUB2 273 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 AKR1E2Q96JD6 320 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 YPEL2Q96QA6 119 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 BARX1Q9HBU1 254 aaPredicted RBP14.87□□□□□ -0.03
VRK3-225ENST00000601912 IDI2-AS1Q9NZ38 188 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 MGAT4CQ9UBM8 478 aa14.87□□□□□ -0.03
VRK3-225ENST00000601912 PDLIM4P50479 330 aa14.86□□□□□ -0.03
VRK3-225ENST00000601912 LOXL3P58215 753 aa14.86□□□□□ -0.03
VRK3-225ENST00000601912 RND3P61587 244 aa14.86□□□□□ -0.03
VRK3-225ENST00000601912 SUPT4H1P63272 117 aaKnown RBP14.86□□□□□ -0.03
VRK3-225ENST00000601912 ZNF273Q14593 569 aa14.86□□□□□ -0.03
VRK3-225ENST00000601912 SLC9A3R2Q15599 337 aa14.86□□□□□ -0.03
VRK3-225ENST00000601912 MORN2Q502X0 79 aa14.86□□□□□ -0.03
VRK3-225ENST00000601912 ZNF525Q8N782 197 aa14.86□□□□□ -0.03
VRK3-225ENST00000601912 OR10A7Q8NGE5 316 aa14.86□□□□□ -0.03
VRK3-225ENST00000601912 OR52M1Q8NGK5 317 aa14.86□□□□□ -0.03
VRK3-225ENST00000601912 ST6GAL2Q96JF0 529 aa14.86□□□□□ -0.03
VRK3-225ENST00000601912 NAA60Q9H7X0 242 aa14.86□□□□□ -0.03
VRK3-225ENST00000601912 PATZ1Q9HBE1 687 aaKnown RBP14.86□□□□□ -0.03
VRK3-225ENST00000601912 KCNS2Q9ULS6 477 aa14.86□□□□□ -0.03
VRK3-225ENST00000601912 DCHS2Q6V1P9 2916 aa14.86□□□□□ -0.03
VRK3-225ENST00000601912 A0A1W2PPH5 198 aa14.85□□□□□ -0.03
VRK3-225ENST00000601912 A8MV72 311 aaPredicted RBP14.85□□□□□ -0.03
VRK3-225ENST00000601912 MPPED1O15442 326 aa14.85□□□□□ -0.03
VRK3-225ENST00000601912 COL8A1P27658 744 aa14.85□□□□□ -0.03
VRK3-225ENST00000601912 BVESQ8NE79 360 aa14.85□□□□□ -0.03
VRK3-225ENST00000601912 PARP12Q9H0J9 701 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms