RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 AMMECR1Q9Y4X0 333 aaPredicted RBP13.63□□□□□ -0.23
USHBP1-210ENST00000600286 A0A087X0M5 115 aa13.62□□□□□ -0.23
USHBP1-210ENST00000600286 A0A1B0GX30 115 aa13.62□□□□□ -0.23
USHBP1-210ENST00000600286 FABP12A6NFH5 140 aa13.62□□□□□ -0.23
USHBP1-210ENST00000600286 IFNA2P01563 188 aa13.62□□□□□ -0.23
USHBP1-210ENST00000600286 LPLP06858 475 aa13.62□□□□□ -0.23
USHBP1-210ENST00000600286 IL3RAP26951 378 aa13.62□□□□□ -0.23
USHBP1-210ENST00000600286 HTR1DP28221 377 aa13.62□□□□□ -0.23
USHBP1-210ENST00000600286 TNFSF8P32971 234 aa13.62□□□□□ -0.23
USHBP1-210ENST00000600286 CEACAM3P40198 252 aa13.62□□□□□ -0.23
USHBP1-210ENST00000600286 ARPC4P59998 168 aa13.62□□□□□ -0.23
USHBP1-210ENST00000600286 MRPS10P82664 201 aaKnown RBP13.62□□□□□ -0.23
USHBP1-210ENST00000600286 PRB3Q04118 309 aaPredicted RBP13.62□□□□□ -0.23
USHBP1-210ENST00000600286 IL18Q14116 193 aa13.62□□□□□ -0.23
USHBP1-210ENST00000600286 FOXB2Q5VYV0 432 aa13.62□□□□□ -0.23
USHBP1-210ENST00000600286 PYHIN1Q6K0P9 492 aa13.62□□□□□ -0.23
USHBP1-210ENST00000600286 BRD3OSQ6XYD6 125 aa13.62□□□□□ -0.23
USHBP1-210ENST00000600286 Q6ZS49 121 aa13.62□□□□□ -0.23
USHBP1-210ENST00000600286 ZNF418Q8TF45 676 aaPredicted RBP13.62□□□□□ -0.23
USHBP1-210ENST00000600286 ZDHHC16Q969W1 377 aa13.62□□□□□ -0.23
USHBP1-210ENST00000600286 OCEL1Q9H607 264 aa13.62□□□□□ -0.23
USHBP1-210ENST00000600286 ZNF69Q9UC07 566 aa13.62□□□□□ -0.23
USHBP1-210ENST00000600286 IGHV3-43A0A0B4J1X8 118 aa13.61□□□□□ -0.23
USHBP1-210ENST00000600286 YPEL1O60688 119 aa13.61□□□□□ -0.23
USHBP1-210ENST00000600286 DIRAS3O95661 229 aa13.61□□□□□ -0.23
USHBP1-210ENST00000600286 HLA-DQB1P01920 261 aa13.61□□□□□ -0.23
USHBP1-210ENST00000600286 FBP1P09467 338 aa13.61□□□□□ -0.23
USHBP1-210ENST00000600286 SCTP09683 121 aa13.61□□□□□ -0.23
USHBP1-210ENST00000600286 IGHV3-43DP0DP04 118 aa13.61□□□□□ -0.23
USHBP1-210ENST00000600286 ARHGDIBP52566 201 aa13.61□□□□□ -0.23
USHBP1-210ENST00000600286 DLX1P56177 255 aa13.61□□□□□ -0.23
USHBP1-210ENST00000600286 SPANXN2Q5MJ10 180 aa13.61□□□□□ -0.23
USHBP1-210ENST00000600286 MINOS1Q5TGZ0 78 aa13.61□□□□□ -0.23
USHBP1-210ENST00000600286 ZNF626Q68DY1 528 aa13.61□□□□□ -0.23
USHBP1-210ENST00000600286 C9orf139Q6ZV77 190 aa13.61□□□□□ -0.23
USHBP1-210ENST00000600286 HOGA1Q86XE5 327 aa13.61□□□□□ -0.23
USHBP1-210ENST00000600286 BEND2Q8NDZ0 799 aa13.61□□□□□ -0.23
USHBP1-210ENST00000600286 BEST4Q8NFU0 473 aa13.61□□□□□ -0.23
USHBP1-210ENST00000600286 OR10X1Q8NGY0 326 aa13.61□□□□□ -0.23
USHBP1-210ENST00000600286 OR10J5Q8NHC4 309 aa13.61□□□□□ -0.23
USHBP1-210ENST00000600286 FCAMRQ8WWV6 532 aa13.61□□□□□ -0.23
USHBP1-210ENST00000600286 EDARADDQ8WWZ3 215 aa13.61□□□□□ -0.23
USHBP1-210ENST00000600286 YPEL2Q96QA6 119 aa13.61□□□□□ -0.23
USHBP1-210ENST00000600286 GINS4Q9BRT9 223 aa13.61□□□□□ -0.23
USHBP1-210ENST00000600286 SLC23A1Q9UHI7 598 aa13.61□□□□□ -0.23
USHBP1-210ENST00000600286 PSG11Q9UQ72 335 aa13.61□□□□□ -0.23
USHBP1-210ENST00000600286 MINOS1-NBL1R4GNA1 71 aa13.61□□□□□ -0.23
USHBP1-210ENST00000600286 KIAA2026Q5HYC2 2103 aa13.6□□□□□ -0.23
USHBP1-210ENST00000600286 FAM172BPA6NC97 362 aa13.6□□□□□ -0.23
USHBP1-210ENST00000600286 LEUTXA8MZ59 168 aa13.6□□□□□ -0.23
USHBP1-210ENST00000600286 J3QR06 171 aa13.6□□□□□ -0.23
USHBP1-210ENST00000600286 BET1O15155 118 aa13.6□□□□□ -0.23
USHBP1-210ENST00000600286 SSX5O60225 188 aa13.6□□□□□ -0.23
USHBP1-210ENST00000600286 GSTT2P0CG29 244 aa13.6□□□□□ -0.23
USHBP1-210ENST00000600286 GSTT2BP0CG30 244 aa13.6□□□□□ -0.23
USHBP1-210ENST00000600286 SAA4P35542 130 aa13.6□□□□□ -0.23
USHBP1-210ENST00000600286 GDNFP39905 211 aa13.6□□□□□ -0.23
USHBP1-210ENST00000600286 CEACAM6P40199 344 aa13.6□□□□□ -0.23
USHBP1-210ENST00000600286 GNG10P50151 68 aa13.6□□□□□ -0.23
USHBP1-210ENST00000600286 RUSC1-AS1Q66K80 236 aa13.6□□□□□ -0.23
USHBP1-210ENST00000600286 HCP5Q6MZN7 132 aa13.6□□□□□ -0.23
USHBP1-210ENST00000600286 FAM131AQ6UXB0 335 aa13.6□□□□□ -0.23
USHBP1-210ENST00000600286 C8orf31Q8N9H6 132 aa13.6□□□□□ -0.23
USHBP1-210ENST00000600286 OR2AK2Q8NG84 335 aa13.6□□□□□ -0.23
USHBP1-210ENST00000600286 OR52L2PQ8NGH6 319 aa13.6□□□□□ -0.23
USHBP1-210ENST00000600286 OR10V1Q8NGI7 309 aa13.6□□□□□ -0.23
USHBP1-210ENST00000600286 C22orf15Q8WYQ4 148 aa13.6□□□□□ -0.23
USHBP1-210ENST00000600286 MAFIPQ8WZ33 124 aa13.6□□□□□ -0.23
USHBP1-210ENST00000600286 MALSU1Q96EH3 234 aa13.6□□□□□ -0.23
USHBP1-210ENST00000600286 CYYR1Q96J86 154 aa13.6□□□□□ -0.23
USHBP1-210ENST00000600286 MMP28Q9H239 520 aa13.6□□□□□ -0.23
USHBP1-210ENST00000600286 DPM3Q9P2X0 92 aa13.6□□□□□ -0.23
USHBP1-210ENST00000600286 ANXA10Q9UJ72 324 aa13.6□□□□□ -0.23
USHBP1-210ENST00000600286 RBBP9O75884 186 aa13.59□□□□□ -0.23
USHBP1-210ENST00000600286 IGHV3-7P01780 117 aa13.59□□□□□ -0.23
USHBP1-210ENST00000600286 PTHLHP12272 177 aa13.59□□□□□ -0.23
USHBP1-210ENST00000600286 OR3A3P47888 321 aa13.59□□□□□ -0.23
USHBP1-210ENST00000600286 RAB7AP51149 207 aa13.59□□□□□ -0.23
USHBP1-210ENST00000600286 LOXL3P58215 753 aa13.59□□□□□ -0.23
USHBP1-210ENST00000600286 MADCAM1Q13477 382 aa13.59□□□□□ -0.23
USHBP1-210ENST00000600286 MORN2Q502X0 79 aa13.59□□□□□ -0.23
USHBP1-210ENST00000600286 LY6G6FQ5SQ64 297 aa13.59□□□□□ -0.23
USHBP1-210ENST00000600286 LEAP2Q969E1 77 aa13.59□□□□□ -0.23
USHBP1-210ENST00000600286 JMJD8Q96S16 334 aa13.59□□□□□ -0.23
USHBP1-210ENST00000600286 GHITMQ9H3K2 345 aa13.59□□□□□ -0.23
USHBP1-210ENST00000600286 MEIS3P1A6NDR6 274 aa13.58□□□□□ -0.24
USHBP1-210ENST00000600286 ODF3BA8MYP8 253 aa13.58□□□□□ -0.24
USHBP1-210ENST00000600286 PTBP1P26599 531 aaKnown RBP eCLIP13.58□□□□□ -0.24
USHBP1-210ENST00000600286 PPP1CCP36873 323 aaKnown RBP13.58□□□□□ -0.24
USHBP1-210ENST00000600286 TAS2R46P59540 309 aa13.58□□□□□ -0.24
USHBP1-210ENST00000600286 ACTBP60709 375 aa13.58□□□□□ -0.24
USHBP1-210ENST00000600286 ACTG1P63261 375 aa13.58□□□□□ -0.24
USHBP1-210ENST00000600286 HLA-DRB5Q30154 266 aa13.58□□□□□ -0.24
USHBP1-210ENST00000600286 CNPY1Q3B7I2 92 aa13.58□□□□□ -0.24
USHBP1-210ENST00000600286 CCDC144NLQ6NUI1 221 aa13.58□□□□□ -0.24
USHBP1-210ENST00000600286 LINC00311Q8N616 119 aa13.58□□□□□ -0.24
USHBP1-210ENST00000600286 GPX8Q8TED1 209 aa13.58□□□□□ -0.24
USHBP1-210ENST00000600286 MDFIQ99750 246 aa13.58□□□□□ -0.24
USHBP1-210ENST00000600286 NECAP2Q9NVZ3 263 aa13.58□□□□□ -0.24
USHBP1-210ENST00000600286 RBM7Q9Y580 266 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms