RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 HOXA4Q00056 320 aaPredicted RBP13.04□□□□□ -0.32
ZNF541-205ENST00000595558 GTF3C1Q12789 2109 aa13.04□□□□□ -0.32
ZNF541-205ENST00000595558 ABHD17BQ5VST6 288 aa13.04□□□□□ -0.32
ZNF541-205ENST00000595558 LCN15Q6UWW0 184 aa13.04□□□□□ -0.32
ZNF541-205ENST00000595558 COLCA1Q6ZS62 124 aa13.04□□□□□ -0.32
ZNF541-205ENST00000595558 GNPNAT1Q96EK6 184 aaPredicted RBP13.04□□□□□ -0.32
ZNF541-205ENST00000595558 REPIN1Q9BWE0 567 aaKnown RBP13.04□□□□□ -0.32
ZNF541-205ENST00000595558 GPR61Q9BZJ8 451 aa13.04□□□□□ -0.32
ZNF541-205ENST00000595558 PRDM14Q9GZV8 571 aa13.04□□□□□ -0.32
ZNF541-205ENST00000595558 RPRMQ9NS64 109 aa13.04□□□□□ -0.32
ZNF541-205ENST00000595558 TNFSF15O95150 251 aa13.04□□□□□ -0.32
ZNF541-205ENST00000595558 HSPB1P04792 205 aaKnown RBP13.04□□□□□ -0.32
ZNF541-205ENST00000595558 IAPPP10997 89 aa13.04□□□□□ -0.32
ZNF541-205ENST00000595558 LHX2P50458 406 aa13.04□□□□□ -0.32
ZNF541-205ENST00000595558 TAS2R30P59541 319 aa13.04□□□□□ -0.32
ZNF541-205ENST00000595558 ZNF726P1Q15940 193 aa13.04□□□□□ -0.32
ZNF541-205ENST00000595558 C4orf17Q53FE4 359 aa13.04□□□□□ -0.32
ZNF541-205ENST00000595558 RIPPLY2Q5TAB7 128 aa13.04□□□□□ -0.32
ZNF541-205ENST00000595558 IL1F10Q8WWZ1 152 aa13.04□□□□□ -0.32
ZNF541-205ENST00000595558 SSX3Q99909 188 aa13.04□□□□□ -0.32
ZNF541-205ENST00000595558 TTTY12Q9BZ98 90 aa13.04□□□□□ -0.32
ZNF541-205ENST00000595558 ATP23Q9Y6H3 246 aa13.04□□□□□ -0.32
ZNF541-205ENST00000595558 BTBD17A6NE02 478 aa13.03□□□□□ -0.32
ZNF541-205ENST00000595558 LY86O95711 162 aa13.03□□□□□ -0.32
ZNF541-205ENST00000595558 PMP22Q01453 160 aa13.03□□□□□ -0.32
ZNF541-205ENST00000595558 RNFT1Q5M7Z0 435 aa13.03□□□□□ -0.32
ZNF541-205ENST00000595558 FAM180AQ6UWF9 173 aa13.03□□□□□ -0.32
ZNF541-205ENST00000595558 DBX2Q6ZNG2 339 aa13.03□□□□□ -0.32
ZNF541-205ENST00000595558 Q6ZS49 121 aa13.03□□□□□ -0.32
ZNF541-205ENST00000595558 TMEM251Q8N6I4 163 aa13.03□□□□□ -0.32
ZNF541-205ENST00000595558 ZNF383Q8NA42 475 aa13.03□□□□□ -0.32
ZNF541-205ENST00000595558 OR8G5Q8NG78 346 aa13.03□□□□□ -0.32
ZNF541-205ENST00000595558 OR10D4PQ8NGN7 298 aa13.03□□□□□ -0.32
ZNF541-205ENST00000595558 MRPL30Q8TCC3 161 aaKnown RBP13.03□□□□□ -0.32
ZNF541-205ENST00000595558 IER2Q9BTL4 223 aa13.03□□□□□ -0.32
ZNF541-205ENST00000595558 STRADBQ9C0K7 418 aa13.03□□□□□ -0.32
ZNF541-205ENST00000595558 ZNF703Q9H7S9 590 aaPredicted RBP13.03□□□□□ -0.32
ZNF541-205ENST00000595558 OR1A1Q9P1Q5 309 aa13.03□□□□□ -0.32
ZNF541-205ENST00000595558 ERRFI1Q9UJM3 462 aaPredicted RBP13.03□□□□□ -0.32
ZNF541-205ENST00000595558 CYTIPO60759 359 aa13.03□□□□□ -0.32
ZNF541-205ENST00000595558 IGKV1-39P01597 117 aa13.03□□□□□ -0.32
ZNF541-205ENST00000595558 IGKV1D-39P04432 117 aa13.03□□□□□ -0.32
ZNF541-205ENST00000595558 F2RP25116 425 aa13.03□□□□□ -0.32
ZNF541-205ENST00000595558 GLIPR1P48060 266 aa13.03□□□□□ -0.32
ZNF541-205ENST00000595558 CLDN18P56856 261 aa13.03□□□□□ -0.32
ZNF541-205ENST00000595558 SPATA46Q5T0L3 261 aa13.03□□□□□ -0.32
ZNF541-205ENST00000595558 FAM90A2PQ658T7 463 aa13.03□□□□□ -0.32
ZNF541-205ENST00000595558 NUFIP2Q7Z417 695 aaKnown RBP13.03□□□□□ -0.32
ZNF541-205ENST00000595558 PRR18Q8N4B5 295 aa13.03□□□□□ -0.32
ZNF541-205ENST00000595558 OR5D13Q8NGL4 314 aa13.03□□□□□ -0.32
ZNF541-205ENST00000595558 ABHD5Q8WTS1 349 aa13.03□□□□□ -0.32
ZNF541-205ENST00000595558 UNKLQ9H9P5 680 aaKnown RBP13.03□□□□□ -0.32
ZNF541-205ENST00000595558 MED12LQ86YW9 2145 aa13.02□□□□□ -0.32
ZNF541-205ENST00000595558 CADP27708 2225 aa13.02□□□□□ -0.32
ZNF541-205ENST00000595558 A0A087WWC5 75 aa13.02□□□□□ -0.32
ZNF541-205ENST00000595558 LOC102723971A0A1B0GUV8 181 aa13.02□□□□□ -0.32
ZNF541-205ENST00000595558 H0Y980 276 aa13.02□□□□□ -0.32
ZNF541-205ENST00000595558 METTL15P1P0C7V9 234 aa13.02□□□□□ -0.32
ZNF541-205ENST00000595558 CEACAM1P13688 526 aa13.02□□□□□ -0.32
ZNF541-205ENST00000595558 TLE4Q04727 773 aa13.02□□□□□ -0.32
ZNF541-205ENST00000595558 BAXQ07812 192 aa13.02□□□□□ -0.32
ZNF541-205ENST00000595558 SLC25A24Q6NUK1 477 aa13.02□□□□□ -0.32
ZNF541-205ENST00000595558 ESPL1Q14674 2120 aa13.02□□□□□ -0.32
ZNF541-205ENST00000595558 CD200P41217 278 aa13.02□□□□□ -0.33
ZNF541-205ENST00000595558 HLA-DRB3P79483 266 aa13.02□□□□□ -0.33
ZNF541-205ENST00000595558 PLGLB1Q02325 96 aa13.02□□□□□ -0.33
ZNF541-205ENST00000595558 CEACAM21Q3KPI0 293 aa13.02□□□□□ -0.33
ZNF541-205ENST00000595558 HES3Q5TGS1 186 aa13.02□□□□□ -0.33
ZNF541-205ENST00000595558 ZNF324BQ6AW86 544 aaPredicted RBP13.02□□□□□ -0.33
ZNF541-205ENST00000595558 MRPL21Q7Z2W9 205 aaKnown RBP13.02□□□□□ -0.33
ZNF541-205ENST00000595558 ZDHHC23Q8IYP9 409 aa13.02□□□□□ -0.33
ZNF541-205ENST00000595558 OR1K1Q8NGR3 316 aa13.02□□□□□ -0.33
ZNF541-205ENST00000595558 FRZBQ92765 325 aa13.02□□□□□ -0.33
ZNF541-205ENST00000595558 GAR1Q9NY12 217 aaKnown RBP13.02□□□□□ -0.33
ZNF541-205ENST00000595558 ROS1P08922 2347 aa13.02□□□□□ -0.33
ZNF541-205ENST00000595558 CEP295Q9C0D2 2601 aa13.01□□□□□ -0.33
ZNF541-205ENST00000595558 TRAV24A0A0B4J272 114 aa13.01□□□□□ -0.33
ZNF541-205ENST00000595558 TRAPPC2LH3BP13 241 aa13.01□□□□□ -0.33
ZNF541-205ENST00000595558 RHBDL1O75783 438 aa13.01□□□□□ -0.33
ZNF541-205ENST00000595558 MT-CO3P00414 261 aa13.01□□□□□ -0.33
ZNF541-205ENST00000595558 IL24Q13007 206 aa13.01□□□□□ -0.33
ZNF541-205ENST00000595558 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.01□□□□□ -0.33
ZNF541-205ENST00000595558 HAPLN4Q86UW8 402 aa13.01□□□□□ -0.33
ZNF541-205ENST00000595558 TECTBQ96PL2 329 aa13.01□□□□□ -0.33
ZNF541-205ENST00000595558 PRSS50Q9UI38 385 aa13.01□□□□□ -0.33
ZNF541-205ENST00000595558 CHD3Q12873 2000 aaKnown RBP13.01□□□□□ -0.33
ZNF541-205ENST00000595558 IGLV2-14P01704 120 aa13.01□□□□□ -0.33
ZNF541-205ENST00000595558 CACNG5Q9UF02 275 aa13.01□□□□□ -0.33
ZNF541-205ENST00000595558 KIR2DS1A0A191URI9 304 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 TRGC1P0CF51 173 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 SELEP16581 610 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 KIR2DS4P43632 304 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 KIR2DS1Q14954 304 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 KHDC3LQ587J8 217 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 STX12Q86Y82 276 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 RBMXL1Q96E39 390 aaKnown RBP13□□□□□ -0.33
ZNF541-205ENST00000595558 ABHD14BQ96IU4 210 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 PPP1R3CQ9UQK1 317 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 DMRT1Q9Y5R6 373 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 ANKRD11Q6UB99 2663 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms