RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 hADV38S2A0JD32 116 aa11.14□□□□□ -0.63
VMP1-217ENST00000593168 SNRPGP15A8MWD9 76 aa11.14□□□□□ -0.63
VMP1-217ENST00000593168 SPINT2O43291 252 aa11.14□□□□□ -0.63
VMP1-217ENST00000593168 PPIHO43447 177 aaKnown RBP11.14□□□□□ -0.63
VMP1-217ENST00000593168 NDUFS7O75251 213 aa11.14□□□□□ -0.63
VMP1-217ENST00000593168 PPYP01298 95 aa11.14□□□□□ -0.63
VMP1-217ENST00000593168 HBZP02008 142 aa11.14□□□□□ -0.63
VMP1-217ENST00000593168 CTSDP07339 412 aaPredicted RBP11.14□□□□□ -0.63
VMP1-217ENST00000593168 TRAPPC2P0DI81 140 aa11.14□□□□□ -0.63
VMP1-217ENST00000593168 TRAPPC2BP0DI82 140 aa11.14□□□□□ -0.63
VMP1-217ENST00000593168 VSIG10L2P0DP72 767 aa11.14□□□□□ -0.63
VMP1-217ENST00000593168 AADACP22760 399 aa11.14□□□□□ -0.63
VMP1-217ENST00000593168 NFYAP23511 347 aaPredicted RBP11.14□□□□□ -0.63
VMP1-217ENST00000593168 ZBTB25P24278 435 aa11.14□□□□□ -0.63
VMP1-217ENST00000593168 IL2RGP31785 369 aa11.14□□□□□ -0.63
VMP1-217ENST00000593168 TAS2R31P59538 309 aa11.14□□□□□ -0.63
VMP1-217ENST00000593168 UBE2MP61081 183 aaKnown RBP11.14□□□□□ -0.63
VMP1-217ENST00000593168 HERV-K104P61576 105 aa11.14□□□□□ -0.63
VMP1-217ENST00000593168 LPCAT3Q6P1A2 487 aa11.14□□□□□ -0.63
VMP1-217ENST00000593168 SLC25A42Q86VD7 318 aa11.14□□□□□ -0.63
VMP1-217ENST00000593168 H1FOOQ8IZA3 346 aaPredicted RBP11.14□□□□□ -0.63
VMP1-217ENST00000593168 SPICQ8N5J4 248 aa11.14□□□□□ -0.63
VMP1-217ENST00000593168 OR1L1Q8NH94 360 aa11.14□□□□□ -0.63
VMP1-217ENST00000593168 ZFAND1Q8TCF1 268 aa11.14□□□□□ -0.63
VMP1-217ENST00000593168 ARL11Q969Q4 196 aa11.14□□□□□ -0.63
VMP1-217ENST00000593168 PERPQ96FX8 193 aa11.14□□□□□ -0.63
VMP1-217ENST00000593168 CCL19Q99731 98 aa11.14□□□□□ -0.63
VMP1-217ENST00000593168 RTBDNQ9BSG5 229 aaPredicted RBP11.14□□□□□ -0.63
VMP1-217ENST00000593168 DCTN5Q9BTE1 182 aa11.14□□□□□ -0.63
VMP1-217ENST00000593168 BEX2Q9BXY8 128 aa11.14□□□□□ -0.63
VMP1-217ENST00000593168 TMPRSS13Q9BYE2 586 aa11.14□□□□□ -0.63
VMP1-217ENST00000593168 C5orf66Q9H5L9 145 aa11.14□□□□□ -0.63
VMP1-217ENST00000593168 BEX1Q9HBH7 125 aa11.14□□□□□ -0.63
VMP1-217ENST00000593168 LPAR3Q9UBY5 353 aa11.14□□□□□ -0.63
VMP1-217ENST00000593168 SLC23A1Q9UHI7 598 aa11.14□□□□□ -0.63
VMP1-217ENST00000593168 ZNF221Q9UK13 617 aa11.14□□□□□ -0.63
VMP1-217ENST00000593168 MXRA5Q9NR99 2828 aa11.14□□□□□ -0.63
VMP1-217ENST00000593168 ATRQ13535 2644 aa11.14□□□□□ -0.63
VMP1-217ENST00000593168 TRGV10A0A0A0MS01 117 aa11.13□□□□□ -0.63
VMP1-217ENST00000593168 FAM172BPA6NC97 362 aa11.13□□□□□ -0.63
VMP1-217ENST00000593168 HMX3A6NHT5 357 aa11.13□□□□□ -0.63
VMP1-217ENST00000593168 DVL1O14640 695 aa11.13□□□□□ -0.63
VMP1-217ENST00000593168 GPR37O15354 613 aa11.13□□□□□ -0.63
VMP1-217ENST00000593168 OR4E1P0C645 316 aa11.13□□□□□ -0.63
VMP1-217ENST00000593168 ZNF728P0DKX0 622 aa11.13□□□□□ -0.63
VMP1-217ENST00000593168 NDUFB7P17568 137 aa11.13□□□□□ -0.63
VMP1-217ENST00000593168 HTD2P86397 168 aa11.13□□□□□ -0.63
VMP1-217ENST00000593168 DHODHQ02127 395 aa11.13□□□□□ -0.63
VMP1-217ENST00000593168 AVPI1Q5T686 147 aa11.13□□□□□ -0.63
VMP1-217ENST00000593168 TMED4Q7Z7H5 227 aa11.13□□□□□ -0.63
VMP1-217ENST00000593168 SLC38A6Q8IZM9 456 aa11.13□□□□□ -0.63
VMP1-217ENST00000593168 PRR18Q8N4B5 295 aa11.13□□□□□ -0.63
VMP1-217ENST00000593168 IL1F10Q8WWZ1 152 aa11.13□□□□□ -0.63
VMP1-217ENST00000593168 FXYD6Q9H0Q3 95 aa11.13□□□□□ -0.63
VMP1-217ENST00000593168 OR51J1Q9H342 316 aa11.13□□□□□ -0.63
VMP1-217ENST00000593168 LINC00574Q9H8X3 128 aa11.13□□□□□ -0.63
VMP1-217ENST00000593168 TAS2R3Q9NYW6 316 aa11.13□□□□□ -0.63
VMP1-217ENST00000593168 CTSZQ9UBR2 303 aa11.13□□□□□ -0.63
VMP1-217ENST00000593168 MIOXQ9UGB7 285 aa11.13□□□□□ -0.63
VMP1-217ENST00000593168 UBE2J1Q9Y385 318 aaPredicted RBP11.13□□□□□ -0.63
VMP1-217ENST00000593168 OR2W1Q9Y3N9 320 aa11.13□□□□□ -0.63
VMP1-217ENST00000593168 DSCAML1Q8TD84 2053 aa11.12□□□□□ -0.63
VMP1-217ENST00000593168 STAB1Q9NY15 2570 aa11.12□□□□□ -0.63
VMP1-217ENST00000593168 KBTBD11-OT1A0A1B0GTJ5 212 aa11.12□□□□□ -0.63
VMP1-217ENST00000593168 ZNF729A6NN14 1252 aaPredicted RBP11.12□□□□□ -0.63
VMP1-217ENST00000593168 F2RL2O00254 374 aa11.12□□□□□ -0.63
VMP1-217ENST00000593168 HSPA12AO43301 675 aa11.12□□□□□ -0.63
VMP1-217ENST00000593168 PFDN1O60925 122 aa11.12□□□□□ -0.63
VMP1-217ENST00000593168 FCN3O75636 299 aa11.12□□□□□ -0.63
VMP1-217ENST00000593168 WNT2P09544 360 aa11.12□□□□□ -0.63
VMP1-217ENST00000593168 PGAM2P15259 253 aa11.12□□□□□ -0.63
VMP1-217ENST00000593168 SSTR5P35346 364 aa11.12□□□□□ -0.63
VMP1-217ENST00000593168 CEACAM6P40199 344 aa11.12□□□□□ -0.63
VMP1-217ENST00000593168 GPR6P46095 362 aaPredicted RBP11.12□□□□□ -0.63
VMP1-217ENST00000593168 FXYD4P59646 89 aa11.12□□□□□ -0.63
VMP1-217ENST00000593168 TMEM30BQ3MIR4 351 aa11.12□□□□□ -0.63
VMP1-217ENST00000593168 TMEM128Q5BJH2 165 aa11.12□□□□□ -0.63
VMP1-217ENST00000593168 ZNF626Q68DY1 528 aa11.12□□□□□ -0.63
VMP1-217ENST00000593168 ZNF841Q6ZN19 808 aa11.12□□□□□ -0.63
VMP1-217ENST00000593168 ZNF486Q96H40 463 aaPredicted RBP11.12□□□□□ -0.63
VMP1-217ENST00000593168 OR1A1Q9P1Q5 309 aa11.12□□□□□ -0.63
VMP1-217ENST00000593168 CLN8Q9UBY8 286 aa11.12□□□□□ -0.63
VMP1-217ENST00000593168 ZNF69Q9UC07 566 aa11.12□□□□□ -0.63
VMP1-217ENST00000593168 C14orf166Q9Y224 244 aaKnown RBP11.12□□□□□ -0.63
VMP1-217ENST00000593168 LINC00312Q9Y6C7 94 aa11.12□□□□□ -0.63
VMP1-217ENST00000593168 TRBV23-1A0A0A0MS06 115 aa11.11□□□□□ -0.63
VMP1-217ENST00000593168 CREBL2O60519 120 aaPredicted RBP11.11□□□□□ -0.63
VMP1-217ENST00000593168 IGHV4-39P01824 125 aa11.11□□□□□ -0.63
VMP1-217ENST00000593168 PAX1P15863 534 aa11.11□□□□□ -0.63
VMP1-217ENST00000593168 RPS2P15880 293 aaKnown RBP11.11□□□□□ -0.63
VMP1-217ENST00000593168 RRAS2P62070 204 aaPredicted RBP11.11□□□□□ -0.63
VMP1-217ENST00000593168 RPL31P62899 125 aaKnown RBP11.11□□□□□ -0.63
VMP1-217ENST00000593168 CBX3Q13185 183 aa11.11□□□□□ -0.63
VMP1-217ENST00000593168 CARTPTQ16568 116 aa11.11□□□□□ -0.63
VMP1-217ENST00000593168 C17orf58Q2M2W7 97 aa11.11□□□□□ -0.63
VMP1-217ENST00000593168 C4orf46Q504U0 113 aa11.11□□□□□ -0.63
VMP1-217ENST00000593168 CD276Q5ZPR3 534 aa11.11□□□□□ -0.63
VMP1-217ENST00000593168 NLRC3Q7RTR2 1065 aa11.11□□□□□ -0.63
VMP1-217ENST00000593168 TCF23Q7RTU1 214 aa11.11□□□□□ -0.63
VMP1-217ENST00000593168 FGFRL1Q8N441 504 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms