RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 STUMQ69YW2 141 aa11.04□□□□□ -0.64
DNMT1-228ENST00000592705 FAM219AQ8IW50 185 aa11.04□□□□□ -0.64
DNMT1-228ENST00000592705 PUSL1Q8N0Z8 303 aaKnown RBP11.04□□□□□ -0.64
DNMT1-228ENST00000592705 SHISA5Q8N114 240 aa11.04□□□□□ -0.64
DNMT1-228ENST00000592705 LYG1Q8N1E2 194 aa11.04□□□□□ -0.64
DNMT1-228ENST00000592705 DTD1Q8TEA8 209 aa11.04□□□□□ -0.64
DNMT1-228ENST00000592705 MS4A10Q96PG2 267 aa11.04□□□□□ -0.64
DNMT1-228ENST00000592705 PCGF1Q9BSM1 259 aa11.04□□□□□ -0.64
DNMT1-228ENST00000592705 OPN3Q9H1Y3 402 aaPredicted RBP11.04□□□□□ -0.64
DNMT1-228ENST00000592705 SLC2A8Q9NY64 477 aa11.04□□□□□ -0.64
DNMT1-228ENST00000592705 ZNF98A6NK75 572 aa11.04□□□□□ -0.64
DNMT1-228ENST00000592705 KHDC3LQ587J8 217 aa11.04□□□□□ -0.64
DNMT1-228ENST00000592705 OR10A7Q8NGE5 316 aa11.04□□□□□ -0.64
DNMT1-228ENST00000592705 ZNF418Q8TF45 676 aaPredicted RBP11.04□□□□□ -0.64
DNMT1-228ENST00000592705 NAT8BQ9UHF3 227 aa11.04□□□□□ -0.64
DNMT1-228ENST00000592705 MSRB2Q9Y3D2 182 aa11.04□□□□□ -0.64
DNMT1-228ENST00000592705 RP1P56715 2156 aa11.04□□□□□ -0.64
DNMT1-228ENST00000592705 HAND1O96004 215 aa11.04□□□□□ -0.64
DNMT1-228ENST00000592705 IGLV3-19P01714 112 aa11.04□□□□□ -0.64
DNMT1-228ENST00000592705 ERVS71-1P61550 626 aa11.04□□□□□ -0.64
DNMT1-228ENST00000592705 OR10AD1Q8NGE0 317 aa11.04□□□□□ -0.64
DNMT1-228ENST00000592705 R3HDM4Q96D70 268 aa11.04□□□□□ -0.64
DNMT1-228ENST00000592705 ADTRPQ96IZ2 230 aa11.04□□□□□ -0.64
DNMT1-228ENST00000592705 OR6C3Q9NZP0 311 aa11.04□□□□□ -0.64
DNMT1-228ENST00000592705 TIMM9Q9Y5J7 89 aa11.04□□□□□ -0.64
DNMT1-228ENST00000592705 ARL2-SNX15V9GYD0 113 aa11.04□□□□□ -0.64
DNMT1-228ENST00000592705 CCKARP32238 428 aa11.03□□□□□ -0.64
DNMT1-228ENST00000592705 PDCD11Q14690 1871 aaKnown RBP11.03□□□□□ -0.64
DNMT1-228ENST00000592705 GRAMD2BQ96HH9 432 aa11.03□□□□□ -0.64
DNMT1-228ENST00000592705 LMX1BO60663 402 aa11.03□□□□□ -0.64
DNMT1-228ENST00000592705 P2RY4P51582 365 aa11.03□□□□□ -0.64
DNMT1-228ENST00000592705 SPINK9Q5DT21 86 aa11.03□□□□□ -0.64
DNMT1-228ENST00000592705 WDR73Q6P4I2 378 aa11.03□□□□□ -0.64
DNMT1-228ENST00000592705 RASL11BQ9BPW5 248 aa11.03□□□□□ -0.64
DNMT1-228ENST00000592705 GPR179Q6PRD1 2367 aa11.03□□□□□ -0.64
DNMT1-228ENST00000592705 F12P00748 615 aaPredicted RBP11.03□□□□□ -0.64
DNMT1-228ENST00000592705 NHLH1Q02575 133 aa11.03□□□□□ -0.64
DNMT1-228ENST00000592705 OR4S2Q8NH73 311 aa11.03□□□□□ -0.64
DNMT1-228ENST00000592705 NDFIP1Q9BT67 221 aa11.03□□□□□ -0.64
DNMT1-228ENST00000592705 C11orf94C9JXX5 98 aa11.03□□□□□ -0.64
DNMT1-228ENST00000592705 FCN1O00602 326 aa11.03□□□□□ -0.64
DNMT1-228ENST00000592705 SEMA7AO75326 666 aa11.03□□□□□ -0.64
DNMT1-228ENST00000592705 ETFRF1Q6IPR1 90 aa11.03□□□□□ -0.64
DNMT1-228ENST00000592705 ZNRF4Q8WWF5 429 aa11.03□□□□□ -0.64
DNMT1-228ENST00000592705 YAE1D1Q9NRH1 226 aa11.03□□□□□ -0.64
DNMT1-228ENST00000592705 ANKRD36A6QL64 1941 aa11.03□□□□□ -0.64
DNMT1-228ENST00000592705 CCDC88CQ9P219 2028 aa11.03□□□□□ -0.64
DNMT1-228ENST00000592705 TRBV23-1A0A0A0MS06 115 aa11.02□□□□□ -0.64
DNMT1-228ENST00000592705 A0A1W2PP11 408 aa11.02□□□□□ -0.64
DNMT1-228ENST00000592705 PTBP3O95758 552 aaKnown RBP11.02□□□□□ -0.64
DNMT1-228ENST00000592705 CD8AP01732 235 aa11.02□□□□□ -0.64
DNMT1-228ENST00000592705 HKR1P10072 659 aa11.02□□□□□ -0.64
DNMT1-228ENST00000592705 PMCHP20382 165 aa11.02□□□□□ -0.64
DNMT1-228ENST00000592705 CD81P60033 236 aa11.02□□□□□ -0.64
DNMT1-228ENST00000592705 ZP1P60852 638 aa11.02□□□□□ -0.64
DNMT1-228ENST00000592705 MRGPRFQ96AM1 343 aa11.02□□□□□ -0.64
DNMT1-228ENST00000592705 PRO1933Q9H354 126 aa11.02□□□□□ -0.64
DNMT1-228ENST00000592705 A0A0B4J293 547 aa11.02□□□□□ -0.64
DNMT1-228ENST00000592705 DBX1A6NMT0 343 aa11.02□□□□□ -0.64
DNMT1-228ENST00000592705 NHLH2Q02577 135 aa11.02□□□□□ -0.64
DNMT1-228ENST00000592705 LAMTOR1Q6IAA8 161 aa11.02□□□□□ -0.64
DNMT1-228ENST00000592705 MOGAT3Q86VF5 341 aa11.02□□□□□ -0.64
DNMT1-228ENST00000592705 TMEM208Q9BTX3 173 aa11.02□□□□□ -0.64
DNMT1-228ENST00000592705 LHFPL6Q9Y693 200 aa11.02□□□□□ -0.64
DNMT1-228ENST00000592705 CKAP5Q14008 2032 aa11.02□□□□□ -0.64
DNMT1-228ENST00000592705 A0A0J9YW62 118 aa11.02□□□□□ -0.65
DNMT1-228ENST00000592705 SERTM2A0A1B0GWG4 89 aa11.02□□□□□ -0.65
DNMT1-228ENST00000592705 GNG10P50151 68 aa11.02□□□□□ -0.65
DNMT1-228ENST00000592705 EGR4Q05215 589 aa11.02□□□□□ -0.65
DNMT1-228ENST00000592705 TMEM183BQ1AE95 376 aa11.02□□□□□ -0.65
DNMT1-228ENST00000592705 CCDC144NLQ6NUI1 221 aa11.02□□□□□ -0.65
DNMT1-228ENST00000592705 H1FOOQ8IZA3 346 aaPredicted RBP11.02□□□□□ -0.65
DNMT1-228ENST00000592705 PACRGQ96M98 296 aaPredicted RBP11.02□□□□□ -0.65
DNMT1-228ENST00000592705 ANGPTL4Q9BY76 406 aa11.02□□□□□ -0.65
DNMT1-228ENST00000592705 NPIPB13A6NJU9 1138 aa11.02□□□□□ -0.65
DNMT1-228ENST00000592705 FAM74A7A6NL05 159 aa11.02□□□□□ -0.65
DNMT1-228ENST00000592705 NPIPB4C9JG80 1138 aa11.02□□□□□ -0.65
DNMT1-228ENST00000592705 PSG2P11465 335 aa11.02□□□□□ -0.65
DNMT1-228ENST00000592705 CD59P13987 128 aa11.02□□□□□ -0.65
DNMT1-228ENST00000592705 ANKRD55Q3KP44 614 aa11.02□□□□□ -0.65
DNMT1-228ENST00000592705 ABHD14BQ96IU4 210 aa11.02□□□□□ -0.65
DNMT1-228ENST00000592705 NOL4LQ96MY1 436 aaPredicted RBP11.02□□□□□ -0.65
DNMT1-228ENST00000592705 TMEM167BQ9NRX6 74 aa11.02□□□□□ -0.65
DNMT1-228ENST00000592705 RCC2Q9P258 522 aaKnown RBP11.02□□□□□ -0.65
DNMT1-228ENST00000592705 CDIPTO14735 213 aa11.02□□□□□ -0.65
DNMT1-228ENST00000592705 CDCP2Q5VXM1 449 aa11.02□□□□□ -0.65
DNMT1-228ENST00000592705 SLC35E3Q7Z769 313 aa11.02□□□□□ -0.65
DNMT1-228ENST00000592705 JMJD8Q96S16 334 aa11.02□□□□□ -0.65
DNMT1-228ENST00000592705 LYRM2Q9NU23 88 aaPredicted RBP11.02□□□□□ -0.65
DNMT1-228ENST00000592705 ELOVL5Q9NYP7 299 aa11.02□□□□□ -0.65
DNMT1-228ENST00000592705 COL6A6A6NMZ7 2263 aa11.01□□□□□ -0.65
DNMT1-228ENST00000592705 SPTAN1Q13813 2472 aaKnown RBP11.01□□□□□ -0.65
DNMT1-228ENST00000592705 TMEM229AB2RXF0 380 aa11.01□□□□□ -0.65
DNMT1-228ENST00000592705 DNASE2O00115 360 aaPredicted RBP11.01□□□□□ -0.65
DNMT1-228ENST00000592705 HNRNPA3P51991 378 aaKnown RBP11.01□□□□□ -0.65
DNMT1-228ENST00000592705 RNF2Q99496 336 aa11.01□□□□□ -0.65
DNMT1-228ENST00000592705 PPIAL4EA0A075B759 164 aa11.01□□□□□ -0.65
DNMT1-228ENST00000592705 TMEM210A6NLX4 147 aa11.01□□□□□ -0.65
DNMT1-228ENST00000592705 PPIAL4DF5H284 164 aa11.01□□□□□ -0.65
DNMT1-228ENST00000592705 IFNL4K9M1U5 179 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms