RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 MBD3L2Q8NHZ7 208 aaPredicted RBP16.16■□□□□ 0.18
PRKCSH-209ENST00000589838 GALMQ96C23 342 aa16.16■□□□□ 0.18
PRKCSH-209ENST00000589838 TAAR6Q96RI8 345 aa16.16■□□□□ 0.18
PRKCSH-209ENST00000589838 PBDC1Q9BVG4 233 aa16.16■□□□□ 0.18
PRKCSH-209ENST00000589838 PARP12Q9H0J9 701 aaKnown RBP16.16■□□□□ 0.18
PRKCSH-209ENST00000589838 SH3BGRL3Q9H299 93 aa16.16■□□□□ 0.18
PRKCSH-209ENST00000589838 RNF115Q9Y4L5 304 aa16.16■□□□□ 0.18
PRKCSH-209ENST00000589838 OTOGLQ3ZCN5 2332 aa16.16■□□□□ 0.18
PRKCSH-209ENST00000589838 IGHV2OR16-5A0A0B4J2B6 119 aa16.16■□□□□ 0.18
PRKCSH-209ENST00000589838 OR5H1A6NKK0 313 aa16.16■□□□□ 0.18
PRKCSH-209ENST00000589838 IFNL4K9M1U5 179 aa16.16■□□□□ 0.18
PRKCSH-209ENST00000589838 IGLV2-14P01704 120 aa16.16■□□□□ 0.18
PRKCSH-209ENST00000589838 EPHA1P21709 976 aa16.16■□□□□ 0.18
PRKCSH-209ENST00000589838 OMGP23515 440 aa16.16■□□□□ 0.18
PRKCSH-209ENST00000589838 TMEM182Q6ZP80 229 aaPredicted RBP16.16■□□□□ 0.18
PRKCSH-209ENST00000589838 DKK4Q9UBT3 224 aa16.16■□□□□ 0.18
PRKCSH-209ENST00000589838 IGHV3-64DA0A0J9YX35 117 aa16.15■□□□□ 0.18
PRKCSH-209ENST00000589838 DFFBO76075 338 aa16.15■□□□□ 0.18
PRKCSH-209ENST00000589838 ATP6V0CP27449 155 aa16.15■□□□□ 0.18
PRKCSH-209ENST00000589838 ASCL1P50553 236 aa16.15■□□□□ 0.18
PRKCSH-209ENST00000589838 FABP6P51161 128 aa16.15■□□□□ 0.18
PRKCSH-209ENST00000589838 DYNLT3P51808 116 aa16.15■□□□□ 0.18
PRKCSH-209ENST00000589838 GUK1Q16774 197 aa16.15■□□□□ 0.18
PRKCSH-209ENST00000589838 FAM122CQ6P4D5 195 aa16.15■□□□□ 0.18
PRKCSH-209ENST00000589838 OPN3Q9H1Y3 402 aaPredicted RBP16.15■□□□□ 0.18
PRKCSH-209ENST00000589838 NDRG3Q9UGV2 375 aa16.15■□□□□ 0.18
PRKCSH-209ENST00000589838 IGHV1-18A0A0C4DH31 117 aa16.14■□□□□ 0.17
PRKCSH-209ENST00000589838 K7N7A8 449 aa16.14■□□□□ 0.17
PRKCSH-209ENST00000589838 CEACAM1P13688 526 aa16.14■□□□□ 0.17
PRKCSH-209ENST00000589838 IL2RGP31785 369 aa16.14■□□□□ 0.17
PRKCSH-209ENST00000589838 RTP5Q14D33 572 aa16.14■□□□□ 0.17
PRKCSH-209ENST00000589838 SMIM21Q3B7S5 101 aa16.14■□□□□ 0.17
PRKCSH-209ENST00000589838 SMUG1Q53HV7 270 aa16.14■□□□□ 0.17
PRKCSH-209ENST00000589838 WDR82Q6UXN9 313 aa16.14■□□□□ 0.17
PRKCSH-209ENST00000589838 CACNA1GO43497 2377 aa16.14■□□□□ 0.17
PRKCSH-209ENST00000589838 CACNA1HO95180 2353 aa16.14■□□□□ 0.17
PRKCSH-209ENST00000589838 PSPNO60542 156 aa16.14■□□□□ 0.17
PRKCSH-209ENST00000589838 CST7O76096 145 aa16.14■□□□□ 0.17
PRKCSH-209ENST00000589838 TMEM50AO95807 157 aa16.14■□□□□ 0.17
PRKCSH-209ENST00000589838 H2AFB1P0C5Y9 115 aa16.14■□□□□ 0.17
PRKCSH-209ENST00000589838 ZNF16P17020 682 aaPredicted RBP16.14■□□□□ 0.17
PRKCSH-209ENST00000589838 PAX9P55771 341 aa16.14■□□□□ 0.17
PRKCSH-209ENST00000589838 MSMO1Q15800 293 aa16.14■□□□□ 0.17
PRKCSH-209ENST00000589838 ZNF826PQ6ZT77 177 aa16.14■□□□□ 0.17
PRKCSH-209ENST00000589838 DRAM1Q8N682 238 aa16.14■□□□□ 0.17
PRKCSH-209ENST00000589838 FAM213BQ8TBF2 198 aa16.14■□□□□ 0.17
PRKCSH-209ENST00000589838 ATP5SQ99766 215 aa16.14■□□□□ 0.17
PRKCSH-209ENST00000589838 TOLLIPQ9H0E2 274 aa16.14■□□□□ 0.17
PRKCSH-209ENST00000589838 WSB1Q9Y6I7 421 aa16.14■□□□□ 0.17
PRKCSH-209ENST00000589838 A0A0G2JRQ6 117 aa16.13■□□□□ 0.17
PRKCSH-209ENST00000589838 A0A1B0GW64 132 aa16.13■□□□□ 0.17
PRKCSH-209ENST00000589838 A0A1B0GWJ7 208 aa16.13■□□□□ 0.17
PRKCSH-209ENST00000589838 FAM157AC9JC47 383 aa16.13■□□□□ 0.17
PRKCSH-209ENST00000589838 NPBWR1P48145 328 aa16.13■□□□□ 0.17
PRKCSH-209ENST00000589838 CEBPDP49716 269 aaPredicted RBP16.13■□□□□ 0.17
PRKCSH-209ENST00000589838 SULT1A1P50225 295 aa16.13■□□□□ 0.17
PRKCSH-209ENST00000589838 Q6ZR03 302 aa16.13■□□□□ 0.17
PRKCSH-209ENST00000589838 ZNF645Q8N7E2 425 aa16.13■□□□□ 0.17
PRKCSH-209ENST00000589838 TMEM171Q8WVE6 324 aa16.13■□□□□ 0.17
PRKCSH-209ENST00000589838 NINJ1Q92982 152 aa16.13■□□□□ 0.17
PRKCSH-209ENST00000589838 EIF5A2Q9GZV4 153 aaKnown RBP16.13■□□□□ 0.17
PRKCSH-209ENST00000589838 SMDT1Q9H4I9 107 aa16.13■□□□□ 0.17
PRKCSH-209ENST00000589838 SLC25A15Q9Y619 301 aa16.13■□□□□ 0.17
PRKCSH-209ENST00000589838 ZNF318Q5VUA4 2279 aa16.12■□□□□ 0.17
PRKCSH-209ENST00000589838 BTBD17A6NE02 478 aa16.12■□□□□ 0.17
PRKCSH-209ENST00000589838 WNT9BO14905 357 aa16.12■□□□□ 0.17
PRKCSH-209ENST00000589838 OR3A1P47881 315 aa16.12■□□□□ 0.17
PRKCSH-209ENST00000589838 PRAMEF6Q5VXH4 476 aa16.12■□□□□ 0.17
PRKCSH-209ENST00000589838 CACNG5Q9UF02 275 aa16.12■□□□□ 0.17
PRKCSH-209ENST00000589838 URB1O60287 2271 aaKnown RBP16.12■□□□□ 0.17
PRKCSH-209ENST00000589838 KIAA1324LA8MWY0 1029 aaPredicted RBP16.12■□□□□ 0.17
PRKCSH-209ENST00000589838 C12orf77C9JDV5 145 aa16.12■□□□□ 0.17
PRKCSH-209ENST00000589838 H7C2Y5 167 aa16.12■□□□□ 0.17
PRKCSH-209ENST00000589838 TXNL1O43396 289 aa16.12■□□□□ 0.17
PRKCSH-209ENST00000589838 SYNGR2O43760 224 aa16.12■□□□□ 0.17
PRKCSH-209ENST00000589838 NXPH3O95157 252 aa16.12■□□□□ 0.17
PRKCSH-209ENST00000589838 IFNA5P01569 189 aa16.12■□□□□ 0.17
PRKCSH-209ENST00000589838 IGKV1-39P01597 117 aa16.12■□□□□ 0.17
PRKCSH-209ENST00000589838 IGKV1D-39P04432 117 aa16.12■□□□□ 0.17
PRKCSH-209ENST00000589838 FHITP49789 147 aa16.12■□□□□ 0.17
PRKCSH-209ENST00000589838 ZNF585BQ52M93 769 aa16.12■□□□□ 0.17
PRKCSH-209ENST00000589838 TMEM88Q6PEY1 159 aa16.12■□□□□ 0.17
PRKCSH-209ENST00000589838 TRAT1Q6PIZ9 186 aa16.12■□□□□ 0.17
PRKCSH-209ENST00000589838 ODF3L1Q8IXM7 274 aa16.12■□□□□ 0.17
PRKCSH-209ENST00000589838 KDF1Q8NAX2 398 aaPredicted RBP16.12■□□□□ 0.17
PRKCSH-209ENST00000589838 OR1L1Q8NH94 360 aa16.12■□□□□ 0.17
PRKCSH-209ENST00000589838 UBALD1Q8TB05 177 aa16.12■□□□□ 0.17
PRKCSH-209ENST00000589838 LURAP1Q96LR2 239 aa16.12■□□□□ 0.17
PRKCSH-209ENST00000589838 C9JQL5 133 aa16.11■□□□□ 0.17
PRKCSH-209ENST00000589838 FAM90A26D6RGX4 464 aa16.11■□□□□ 0.17
PRKCSH-209ENST00000589838 F12P00748 615 aaPredicted RBP16.11■□□□□ 0.17
PRKCSH-209ENST00000589838 PPT1P50897 306 aa16.11■□□□□ 0.17
PRKCSH-209ENST00000589838 TAS2R30P59541 319 aa16.11■□□□□ 0.17
PRKCSH-209ENST00000589838 DPPA3Q6W0C5 159 aa16.11■□□□□ 0.17
PRKCSH-209ENST00000589838 Q6ZS92 163 aa16.11■□□□□ 0.17
PRKCSH-209ENST00000589838 TMEM217Q8N7C4 229 aa16.11■□□□□ 0.17
PRKCSH-209ENST00000589838 TCTEX1D1Q8N7M0 179 aa16.11■□□□□ 0.17
PRKCSH-209ENST00000589838 MSL2Q9HCI7 577 aa16.11■□□□□ 0.17
PRKCSH-209ENST00000589838 UFSP2Q9NUQ7 469 aa16.11■□□□□ 0.17
PRKCSH-209ENST00000589838 FZR1Q9UM11 496 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms