RNA–Protein interactions for RNA: ENST00000586318.1

TCF3-208, Transcript of transcription factor 3, human

TSL 3

Gene TCF3, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF3-208	ENST00000586318	CSPG4	Q6UVK1	2322 aa		13.62	□□□□□ -0.23
TCF3-208	ENST00000586318	ACAN	P16112	2415 aa		13.61	□□□□□ -0.23
TCF3-208	ENST00000586318	TRBV6-7	A0A0A0MS04	114 aa		13.61	□□□□□ -0.23
TCF3-208	ENST00000586318	IGHV3-43	A0A0B4J1X8	118 aa		13.61	□□□□□ -0.23
TCF3-208	ENST00000586318		A8MV72	311 aa	Predicted RBP	13.61	□□□□□ -0.23
TCF3-208	ENST00000586318	ZNF736	B4DX44	427 aa	Predicted RBP	13.61	□□□□□ -0.23
TCF3-208	ENST00000586318	BET1	O15155	118 aa		13.61	□□□□□ -0.23
TCF3-208	ENST00000586318	LANCL1	O43813	399 aa		13.61	□□□□□ -0.23
TCF3-208	ENST00000586318	YPEL1	O60688	119 aa		13.61	□□□□□ -0.23
TCF3-208	ENST00000586318	RGS11	O94810	467 aa		13.61	□□□□□ -0.23
TCF3-208	ENST00000586318	AVP	P01185	164 aa		13.61	□□□□□ -0.23
TCF3-208	ENST00000586318	CSF1	P09603	554 aa		13.61	□□□□□ -0.23
TCF3-208	ENST00000586318	IGHV3-43D	P0DP04	118 aa		13.61	□□□□□ -0.23
TCF3-208	ENST00000586318	TBP	P20226	339 aa		13.61	□□□□□ -0.23
TCF3-208	ENST00000586318	ZBTB25	P24278	435 aa		13.61	□□□□□ -0.23
TCF3-208	ENST00000586318	HLA-DMA	P28067	261 aa		13.61	□□□□□ -0.23
TCF3-208	ENST00000586318	DLX1	P56177	255 aa		13.61	□□□□□ -0.23
TCF3-208	ENST00000586318	TAS2R19	P59542	299 aa		13.61	□□□□□ -0.23
TCF3-208	ENST00000586318	CDK10	Q15131	360 aa		13.61	□□□□□ -0.23
TCF3-208	ENST00000586318	ACTBL2	Q562R1	376 aa		13.61	□□□□□ -0.23
TCF3-208	ENST00000586318	LY6G6F	Q5SQ64	297 aa		13.61	□□□□□ -0.23
TCF3-208	ENST00000586318	HCP5	Q6MZN7	132 aa		13.61	□□□□□ -0.23
TCF3-208	ENST00000586318	OR5H2	Q8NGV7	314 aa		13.61	□□□□□ -0.23
TCF3-208	ENST00000586318	YPEL2	Q96QA6	119 aa		13.61	□□□□□ -0.23
TCF3-208	ENST00000586318	SMR3A	Q99954	134 aa		13.61	□□□□□ -0.23
TCF3-208	ENST00000586318	CCDC32	Q9BV29	185 aa		13.61	□□□□□ -0.23
TCF3-208	ENST00000586318	TOLLIP	Q9H0E2	274 aa		13.61	□□□□□ -0.23
TCF3-208	ENST00000586318	NECAP2	Q9NVZ3	263 aa		13.61	□□□□□ -0.23
TCF3-208	ENST00000586318	OR1A1	Q9P1Q5	309 aa		13.61	□□□□□ -0.23
TCF3-208	ENST00000586318	SLC23A1	Q9UHI7	598 aa		13.61	□□□□□ -0.23
TCF3-208	ENST00000586318	MAP1A	P78559	2803 aa	Predicted RBP	13.6	□□□□□ -0.23
TCF3-208	ENST00000586318	IGHV2-26	A0A0B4J1V2	119 aa		13.6	□□□□□ -0.23
TCF3-208	ENST00000586318	ANKRD20A5P	A0PJZ0	165 aa		13.6	□□□□□ -0.23
TCF3-208	ENST00000586318	RNASEK-C17orf49	H0YIS7	233 aa		13.6	□□□□□ -0.23
TCF3-208	ENST00000586318	HSPA12A	O43301	675 aa		13.6	□□□□□ -0.23
TCF3-208	ENST00000586318	CD74	P04233	296 aa		13.6	□□□□□ -0.23
TCF3-208	ENST00000586318	COX7A1	P24310	79 aa		13.6	□□□□□ -0.23
TCF3-208	ENST00000586318	OR3A3	P47888	321 aa		13.6	□□□□□ -0.23
TCF3-208	ENST00000586318	KLRD1	Q13241	179 aa		13.6	□□□□□ -0.23
TCF3-208	ENST00000586318	GNMT	Q14749	295 aa		13.6	□□□□□ -0.23
TCF3-208	ENST00000586318	BAK1	Q16611	211 aa		13.6	□□□□□ -0.23
TCF3-208	ENST00000586318	MORN2	Q502X0	79 aa		13.6	□□□□□ -0.23
TCF3-208	ENST00000586318	CLEC9A	Q6UXN8	241 aa		13.6	□□□□□ -0.23
TCF3-208	ENST00000586318	C1orf229	Q6ZS94	237 aa	Predicted RBP	13.6	□□□□□ -0.23
TCF3-208	ENST00000586318	ABHD12	Q8N2K0	398 aa		13.6	□□□□□ -0.23
TCF3-208	ENST00000586318	PNKD	Q8N490	385 aa		13.6	□□□□□ -0.23
TCF3-208	ENST00000586318	TEX29	Q8N6K0	151 aa		13.6	□□□□□ -0.23
TCF3-208	ENST00000586318	OR10V1	Q8NGI7	309 aa		13.6	□□□□□ -0.23
TCF3-208	ENST00000586318	OR10J5	Q8NHC4	309 aa		13.6	□□□□□ -0.23
TCF3-208	ENST00000586318	LHX4	Q969G2	390 aa		13.6	□□□□□ -0.23
TCF3-208	ENST00000586318	TSC22D3	Q99576	134 aa		13.6	□□□□□ -0.23
TCF3-208	ENST00000586318	GINS4	Q9BRT9	223 aa		13.6	□□□□□ -0.23
TCF3-208	ENST00000586318	CLEC7A	Q9BXN2	247 aa		13.6	□□□□□ -0.23
TCF3-208	ENST00000586318	TMEM160	Q9NX00	188 aa		13.6	□□□□□ -0.23
TCF3-208	ENST00000586318	TEX15	Q9BXT5	2789 aa		13.59	□□□□□ -0.23
TCF3-208	ENST00000586318	FAM172BP	A6NC97	362 aa		13.59	□□□□□ -0.23
TCF3-208	ENST00000586318	PMP2	P02689	132 aa		13.59	□□□□□ -0.23
TCF3-208	ENST00000586318	CD3D	P04234	171 aa		13.59	□□□□□ -0.23
TCF3-208	ENST00000586318	HRH1	P35367	487 aa		13.59	□□□□□ -0.23
TCF3-208	ENST00000586318	PPP1CC	P36873	323 aa	Known RBP	13.59	□□□□□ -0.23
TCF3-208	ENST00000586318	CEACAM6	P40199	344 aa		13.59	□□□□□ -0.23
TCF3-208	ENST00000586318	UBE2E1	P51965	193 aa		13.59	□□□□□ -0.23
TCF3-208	ENST00000586318	PRB3	Q04118	309 aa	Predicted RBP	13.59	□□□□□ -0.23
TCF3-208	ENST00000586318	VAX1	Q5SQQ9	334 aa		13.59	□□□□□ -0.23
TCF3-208	ENST00000586318	UTF1	Q5T230	341 aa		13.59	□□□□□ -0.23
TCF3-208	ENST00000586318	TRIQK	Q629K1	86 aa		13.59	□□□□□ -0.23
TCF3-208	ENST00000586318	FAM53A	Q6NSI3	398 aa	Predicted RBP	13.59	□□□□□ -0.23
TCF3-208	ENST00000586318	OVCH2	Q7RTZ1	564 aa		13.59	□□□□□ -0.23
TCF3-208	ENST00000586318	H1FOO	Q8IZA3	346 aa	Predicted RBP	13.59	□□□□□ -0.23
TCF3-208	ENST00000586318	C8orf31	Q8N9H6	132 aa		13.59	□□□□□ -0.23
TCF3-208	ENST00000586318	OR11H6	Q8NGC7	330 aa		13.59	□□□□□ -0.23
TCF3-208	ENST00000586318	OR9G1	Q8NH87	305 aa		13.59	□□□□□ -0.23
TCF3-208	ENST00000586318	EHF	Q9NZC4	300 aa		13.59	□□□□□ -0.23
TCF3-208	ENST00000586318	ZNF69	Q9UC07	566 aa		13.59	□□□□□ -0.23
TCF3-208	ENST00000586318	TRAV40	A0A0B4J280	105 aa		13.58	□□□□□ -0.24
TCF3-208	ENST00000586318	CENPVL3	A0A0U1RRI6	287 aa		13.58	□□□□□ -0.24
TCF3-208	ENST00000586318	ITGB1BP1	O14713	200 aa		13.58	□□□□□ -0.24
TCF3-208	ENST00000586318	FSHB	P01225	129 aa		13.58	□□□□□ -0.24
TCF3-208	ENST00000586318	OR5H8	P0DN80	308 aa		13.58	□□□□□ -0.24
TCF3-208	ENST00000586318	IL7	P13232	177 aa		13.58	□□□□□ -0.24
TCF3-208	ENST00000586318	AP3S2	P59780	193 aa		13.58	□□□□□ -0.24
TCF3-208	ENST00000586318	DYRK1A	Q13627	763 aa		13.58	□□□□□ -0.24
TCF3-208	ENST00000586318	RNASE10	Q5GAN6	216 aa	Known RBP	13.58	□□□□□ -0.24
TCF3-208	ENST00000586318	KLF17	Q5JT82	389 aa	Predicted RBP	13.58	□□□□□ -0.24
TCF3-208	ENST00000586318	GPR157	Q5UAW9	335 aa		13.58	□□□□□ -0.24
TCF3-208	ENST00000586318	ZNF626	Q68DY1	528 aa		13.58	□□□□□ -0.24
TCF3-208	ENST00000586318	STEAP1B	Q6NZ63	245 aa		13.58	□□□□□ -0.24
TCF3-208	ENST00000586318	TOMM5	Q8N4H5	51 aa		13.58	□□□□□ -0.24
TCF3-208	ENST00000586318	LINC00311	Q8N616	119 aa		13.58	□□□□□ -0.24
TCF3-208	ENST00000586318	ZNF439	Q8NDP4	499 aa		13.58	□□□□□ -0.24
TCF3-208	ENST00000586318	BEND2	Q8NDZ0	799 aa		13.58	□□□□□ -0.24
TCF3-208	ENST00000586318	ZNF596	Q8TC21	504 aa		13.58	□□□□□ -0.24
TCF3-208	ENST00000586318	LEAP2	Q969E1	77 aa		13.58	□□□□□ -0.24
TCF3-208	ENST00000586318	RDH8	Q9NYR8	311 aa		13.58	□□□□□ -0.24
TCF3-208	ENST00000586318	PSG11	Q9UQ72	335 aa		13.58	□□□□□ -0.24
TCF3-208	ENST00000586318	IGHV1-69D	A0A0B4J2H0	117 aa		13.57	□□□□□ -0.24
TCF3-208	ENST00000586318	ODF3B	A8MYP8	253 aa		13.57	□□□□□ -0.24
TCF3-208	ENST00000586318		J3QR06	171 aa		13.57	□□□□□ -0.24
TCF3-208	ENST00000586318		J3QRK9	145 aa		13.57	□□□□□ -0.24
TCF3-208	ENST00000586318	TOR1A	O14656	332 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms