RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 CEACAM3P40198 252 aa11.89□□□□□ -0.51
SCAMP4-209ENST00000585335 MRPS10P82664 201 aaKnown RBP11.89□□□□□ -0.51
SCAMP4-209ENST00000585335 IL18Q14116 193 aa11.89□□□□□ -0.51
SCAMP4-209ENST00000585335 RUSC1-AS1Q66K80 236 aa11.89□□□□□ -0.51
SCAMP4-209ENST00000585335 HCP5Q6MZN7 132 aa11.89□□□□□ -0.51
SCAMP4-209ENST00000585335 BEND2Q8NDZ0 799 aa11.89□□□□□ -0.51
SCAMP4-209ENST00000585335 MAFIPQ8WZ33 124 aa11.89□□□□□ -0.51
SCAMP4-209ENST00000585335 ZNF230Q9UIE0 474 aaPredicted RBP11.89□□□□□ -0.51
SCAMP4-209ENST00000585335 IGHV3-43A0A0B4J1X8 118 aa11.88□□□□□ -0.51
SCAMP4-209ENST00000585335 ODF3BA8MYP8 253 aa11.88□□□□□ -0.51
SCAMP4-209ENST00000585335 J3QR06 171 aa11.88□□□□□ -0.51
SCAMP4-209ENST00000585335 IFNA2P01563 188 aa11.88□□□□□ -0.51
SCAMP4-209ENST00000585335 HLA-DQB1P01920 261 aa11.88□□□□□ -0.51
SCAMP4-209ENST00000585335 FBP1P09467 338 aa11.88□□□□□ -0.51
SCAMP4-209ENST00000585335 SCTP09683 121 aa11.88□□□□□ -0.51
SCAMP4-209ENST00000585335 IGHV3-43DP0DP04 118 aa11.88□□□□□ -0.51
SCAMP4-209ENST00000585335 PTHLHP12272 177 aa11.88□□□□□ -0.51
SCAMP4-209ENST00000585335 IL3RAP26951 378 aa11.88□□□□□ -0.51
SCAMP4-209ENST00000585335 HTR1DP28221 377 aa11.88□□□□□ -0.51
SCAMP4-209ENST00000585335 TNFSF8P32971 234 aa11.88□□□□□ -0.51
SCAMP4-209ENST00000585335 GNG10P50151 68 aa11.88□□□□□ -0.51
SCAMP4-209ENST00000585335 LOXL3P58215 753 aa11.88□□□□□ -0.51
SCAMP4-209ENST00000585335 ARPC4P59998 168 aa11.88□□□□□ -0.51
SCAMP4-209ENST00000585335 MINOS1Q5TGZ0 78 aa11.88□□□□□ -0.51
SCAMP4-209ENST00000585335 PYHIN1Q6K0P9 492 aa11.88□□□□□ -0.51
SCAMP4-209ENST00000585335 Q6ZPA2 131 aa11.88□□□□□ -0.51
SCAMP4-209ENST00000585335 HOGA1Q86XE5 327 aa11.88□□□□□ -0.51
SCAMP4-209ENST00000585335 C8orf31Q8N9H6 132 aa11.88□□□□□ -0.51
SCAMP4-209ENST00000585335 BEST4Q8NFU0 473 aa11.88□□□□□ -0.51
SCAMP4-209ENST00000585335 OR10V1Q8NGI7 309 aa11.88□□□□□ -0.51
SCAMP4-209ENST00000585335 OR10X1Q8NGY0 326 aa11.88□□□□□ -0.51
SCAMP4-209ENST00000585335 OR10J5Q8NHC4 309 aa11.88□□□□□ -0.51
SCAMP4-209ENST00000585335 ZNF418Q8TF45 676 aaPredicted RBP11.88□□□□□ -0.51
SCAMP4-209ENST00000585335 ZDHHC16Q969W1 377 aa11.88□□□□□ -0.51
SCAMP4-209ENST00000585335 GINS4Q9BRT9 223 aa11.88□□□□□ -0.51
SCAMP4-209ENST00000585335 OCEL1Q9H607 264 aa11.88□□□□□ -0.51
SCAMP4-209ENST00000585335 SLC23A1Q9UHI7 598 aa11.88□□□□□ -0.51
SCAMP4-209ENST00000585335 PSG11Q9UQ72 335 aa11.88□□□□□ -0.51
SCAMP4-209ENST00000585335 MINOS1-NBL1R4GNA1 71 aa11.88□□□□□ -0.51
SCAMP4-209ENST00000585335 SONP18583 2426 aaKnown RBP11.87□□□□□ -0.51
SCAMP4-209ENST00000585335 FABP12A6NFH5 140 aa11.87□□□□□ -0.51
SCAMP4-209ENST00000585335 BET1O15155 118 aa11.87□□□□□ -0.51
SCAMP4-209ENST00000585335 YPEL1O60688 119 aa11.87□□□□□ -0.51
SCAMP4-209ENST00000585335 GSTT2P0CG29 244 aa11.87□□□□□ -0.51
SCAMP4-209ENST00000585335 GSTT2BP0CG30 244 aa11.87□□□□□ -0.51
SCAMP4-209ENST00000585335 PPP1CCP36873 323 aaKnown RBP11.87□□□□□ -0.51
SCAMP4-209ENST00000585335 ARHGDIBP52566 201 aa11.87□□□□□ -0.51
SCAMP4-209ENST00000585335 MADCAM1Q13477 382 aa11.87□□□□□ -0.51
SCAMP4-209ENST00000585335 HLA-DRB5Q30154 266 aa11.87□□□□□ -0.51
SCAMP4-209ENST00000585335 SPANXN2Q5MJ10 180 aa11.87□□□□□ -0.51
SCAMP4-209ENST00000585335 LY6G6FQ5SQ64 297 aa11.87□□□□□ -0.51
SCAMP4-209ENST00000585335 FAM131AQ6UXB0 335 aa11.87□□□□□ -0.51
SCAMP4-209ENST00000585335 OR2AK2Q8NG84 335 aa11.87□□□□□ -0.51
SCAMP4-209ENST00000585335 OR52L2PQ8NGH6 319 aa11.87□□□□□ -0.51
SCAMP4-209ENST00000585335 FCAMRQ8WWV6 532 aa11.87□□□□□ -0.51
SCAMP4-209ENST00000585335 EDARADDQ8WWZ3 215 aa11.87□□□□□ -0.51
SCAMP4-209ENST00000585335 C22orf15Q8WYQ4 148 aa11.87□□□□□ -0.51
SCAMP4-209ENST00000585335 LEAP2Q969E1 77 aa11.87□□□□□ -0.51
SCAMP4-209ENST00000585335 YPEL2Q96QA6 119 aa11.87□□□□□ -0.51
SCAMP4-209ENST00000585335 SLC6A7Q99884 636 aa11.87□□□□□ -0.51
SCAMP4-209ENST00000585335 CABLES2Q9BTV7 478 aa11.87□□□□□ -0.51
SCAMP4-209ENST00000585335 MMP28Q9H239 520 aa11.87□□□□□ -0.51
SCAMP4-209ENST00000585335 ANXA10Q9UJ72 324 aa11.87□□□□□ -0.51
SCAMP4-209ENST00000585335 MEIS3P1A6NDR6 274 aa11.86□□□□□ -0.51
SCAMP4-209ENST00000585335 LEUTXA8MZ59 168 aa11.86□□□□□ -0.51
SCAMP4-209ENST00000585335 IGLV1-47P01700 117 aa11.86□□□□□ -0.51
SCAMP4-209ENST00000585335 IGHV3-7P01780 117 aa11.86□□□□□ -0.51
SCAMP4-209ENST00000585335 RCVRNP35243 200 aa11.86□□□□□ -0.51
SCAMP4-209ENST00000585335 CEACAM6P40199 344 aa11.86□□□□□ -0.51
SCAMP4-209ENST00000585335 RAB7AP51149 207 aa11.86□□□□□ -0.51
SCAMP4-209ENST00000585335 TAS2R46P59540 309 aa11.86□□□□□ -0.51
SCAMP4-209ENST00000585335 ACTBP60709 375 aa11.86□□□□□ -0.51
SCAMP4-209ENST00000585335 ACTG1P63261 375 aa11.86□□□□□ -0.51
SCAMP4-209ENST00000585335 GNMTQ14749 295 aa11.86□□□□□ -0.51
SCAMP4-209ENST00000585335 CNPY1Q3B7I2 92 aa11.86□□□□□ -0.51
SCAMP4-209ENST00000585335 MORN2Q502X0 79 aa11.86□□□□□ -0.51
SCAMP4-209ENST00000585335 PIP4P2Q8N4L2 257 aa11.86□□□□□ -0.51
SCAMP4-209ENST00000585335 LINC00311Q8N616 119 aa11.86□□□□□ -0.51
SCAMP4-209ENST00000585335 GPX8Q8TED1 209 aa11.86□□□□□ -0.51
SCAMP4-209ENST00000585335 GCDHQ92947 438 aaPredicted RBP11.86□□□□□ -0.51
SCAMP4-209ENST00000585335 MALSU1Q96EH3 234 aa11.86□□□□□ -0.51
SCAMP4-209ENST00000585335 JMJD8Q96S16 334 aa11.86□□□□□ -0.51
SCAMP4-209ENST00000585335 ABHD14AQ9BUJ0 271 aa11.86□□□□□ -0.51
SCAMP4-209ENST00000585335 NECAP2Q9NVZ3 263 aa11.86□□□□□ -0.51
SCAMP4-209ENST00000585335 DPM3Q9P2X0 92 aa11.86□□□□□ -0.51
SCAMP4-209ENST00000585335 NAV3Q8IVL0 2385 aa11.85□□□□□ -0.51
SCAMP4-209ENST00000585335 A0A0U1RQK1 487 aa11.85□□□□□ -0.51
SCAMP4-209ENST00000585335 BUB1B-PAK6H3BSN5 160 aa11.85□□□□□ -0.51
SCAMP4-209ENST00000585335 GABARAPH6UMI1 98 aa11.85□□□□□ -0.51
SCAMP4-209ENST00000585335 RBBP9O75884 186 aa11.85□□□□□ -0.51
SCAMP4-209ENST00000585335 PTBP1P26599 531 aaKnown RBP eCLIP11.85□□□□□ -0.51
SCAMP4-209ENST00000585335 OR3A3P47888 321 aa11.85□□□□□ -0.51
SCAMP4-209ENST00000585335 IGSF11Q5DX21 431 aa11.85□□□□□ -0.51
SCAMP4-209ENST00000585335 CCDC144NLQ6NUI1 221 aa11.85□□□□□ -0.51
SCAMP4-209ENST00000585335 SLC25A48Q6ZT89 311 aaKnown RBP11.85□□□□□ -0.51
SCAMP4-209ENST00000585335 BCL6BQ8N143 479 aaPredicted RBP11.85□□□□□ -0.51
SCAMP4-209ENST00000585335 GVQW1Q8N7I0 195 aa11.85□□□□□ -0.51
SCAMP4-209ENST00000585335 OR4P4Q8NGL7 312 aa11.85□□□□□ -0.51
SCAMP4-209ENST00000585335 OR6Q1Q8NGQ2 317 aa11.85□□□□□ -0.51
SCAMP4-209ENST00000585335 RPEQ96AT9 228 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms