RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 TNFRSF14Q92956 283 aa11.3□□□□□ -0.6
TRAF4-215ENST00000584944 LEAP2Q969E1 77 aa11.3□□□□□ -0.6
TRAF4-215ENST00000584944 AUNIPQ9H7T9 357 aa11.3□□□□□ -0.6
TRAF4-215ENST00000584944 LINC00574Q9H8X3 128 aa11.3□□□□□ -0.6
TRAF4-215ENST00000584944 Q9N2K0 584 aa11.3□□□□□ -0.6
TRAF4-215ENST00000584944 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.3□□□□□ -0.6
TRAF4-215ENST00000584944 EXTL2Q9UBQ6 330 aa11.3□□□□□ -0.6
TRAF4-215ENST00000584944 SLC23A1Q9UHI7 598 aa11.3□□□□□ -0.6
TRAF4-215ENST00000584944 TBL2Q9Y4P3 447 aaKnown RBP11.3□□□□□ -0.6
TRAF4-215ENST00000584944 DPPA5A6NC42 116 aa11.29□□□□□ -0.6
TRAF4-215ENST00000584944 LEUTXA8MZ59 168 aa11.29□□□□□ -0.6
TRAF4-215ENST00000584944 C15orf65H3BRN8 121 aa11.29□□□□□ -0.6
TRAF4-215ENST00000584944 F2RL2O00254 374 aa11.29□□□□□ -0.6
TRAF4-215ENST00000584944 BET1O15155 118 aa11.29□□□□□ -0.6
TRAF4-215ENST00000584944 FABP7O15540 132 aa11.29□□□□□ -0.6
TRAF4-215ENST00000584944 CGB3P0DN86 165 aa11.29□□□□□ -0.6
TRAF4-215ENST00000584944 CGB7P0DN87 165 aa11.29□□□□□ -0.6
TRAF4-215ENST00000584944 TAS2R20P59543 309 aa11.29□□□□□ -0.6
TRAF4-215ENST00000584944 HTD2P86397 168 aa11.29□□□□□ -0.6
TRAF4-215ENST00000584944 MADCAM1Q13477 382 aa11.29□□□□□ -0.6
TRAF4-215ENST00000584944 HMGN3Q15651 99 aa11.29□□□□□ -0.6
TRAF4-215ENST00000584944 SSX2Q16385 188 aa11.29□□□□□ -0.6
TRAF4-215ENST00000584944 ZNF260Q3ZCT1 412 aa11.29□□□□□ -0.6
TRAF4-215ENST00000584944 MINOS1Q5TGZ0 78 aa11.29□□□□□ -0.6
TRAF4-215ENST00000584944 ZNF626Q68DY1 528 aa11.29□□□□□ -0.6
TRAF4-215ENST00000584944 BAIAP2L2Q6UXY1 529 aa11.29□□□□□ -0.6
TRAF4-215ENST00000584944 C9orf139Q6ZV77 190 aa11.29□□□□□ -0.6
TRAF4-215ENST00000584944 SNX29P2Q8IUI4 249 aa11.29□□□□□ -0.6
TRAF4-215ENST00000584944 BCL6BQ8N143 479 aaPredicted RBP11.29□□□□□ -0.6
TRAF4-215ENST00000584944 OR2AK2Q8NG84 335 aa11.29□□□□□ -0.6
TRAF4-215ENST00000584944 OR4A4PQ8NGN8 299 aa11.29□□□□□ -0.6
TRAF4-215ENST00000584944 OR10J5Q8NHC4 309 aa11.29□□□□□ -0.6
TRAF4-215ENST00000584944 DIRAS2Q96HU8 199 aa11.29□□□□□ -0.6
TRAF4-215ENST00000584944 OCSTAMPQ9BR26 566 aa11.29□□□□□ -0.6
TRAF4-215ENST00000584944 MMP28Q9H239 520 aa11.29□□□□□ -0.6
TRAF4-215ENST00000584944 DPAGT1Q9H3H5 408 aa11.29□□□□□ -0.6
TRAF4-215ENST00000584944 GFOD1Q9NXC2 390 aa11.29□□□□□ -0.6
TRAF4-215ENST00000584944 ZNF230Q9UIE0 474 aaPredicted RBP11.29□□□□□ -0.6
TRAF4-215ENST00000584944 JPT1Q9UK76 154 aa11.29□□□□□ -0.6
TRAF4-215ENST00000584944 KCNK7Q9Y2U2 307 aa11.29□□□□□ -0.6
TRAF4-215ENST00000584944 RBM7Q9Y580 266 aaKnown RBP11.29□□□□□ -0.6
TRAF4-215ENST00000584944 HILPDAQ9Y5L2 63 aa11.29□□□□□ -0.6
TRAF4-215ENST00000584944 MINOS1-NBL1R4GNA1 71 aa11.29□□□□□ -0.6
TRAF4-215ENST00000584944 A0A0A6YYJ9 748 aa11.28□□□□□ -0.6
TRAF4-215ENST00000584944 J3QR06 171 aa11.28□□□□□ -0.6
TRAF4-215ENST00000584944 PPP1CCP36873 323 aaKnown RBP11.28□□□□□ -0.6
TRAF4-215ENST00000584944 GDNFP39905 211 aa11.28□□□□□ -0.6
TRAF4-215ENST00000584944 CEACAM6P40199 344 aa11.28□□□□□ -0.6
TRAF4-215ENST00000584944 DEFB112Q30KQ8 113 aa11.28□□□□□ -0.6
TRAF4-215ENST00000584944 CCDC144NLQ6NUI1 221 aa11.28□□□□□ -0.6
TRAF4-215ENST00000584944 PIP4P2Q8N4L2 257 aa11.28□□□□□ -0.6
TRAF4-215ENST00000584944 BEND2Q8NDZ0 799 aa11.28□□□□□ -0.6
TRAF4-215ENST00000584944 OR52L2PQ8NGH6 319 aa11.28□□□□□ -0.6
TRAF4-215ENST00000584944 SSMEM1Q8WWF3 244 aa11.28□□□□□ -0.6
TRAF4-215ENST00000584944 EDARADDQ8WWZ3 215 aa11.28□□□□□ -0.6
TRAF4-215ENST00000584944 MAFIPQ8WZ33 124 aa11.28□□□□□ -0.6
TRAF4-215ENST00000584944 TOMM40LQ969M1 308 aa11.28□□□□□ -0.6
TRAF4-215ENST00000584944 RPEQ96AT9 228 aa11.28□□□□□ -0.6
TRAF4-215ENST00000584944 MALSU1Q96EH3 234 aa11.28□□□□□ -0.6
TRAF4-215ENST00000584944 RBM38Q9H0Z9 239 aaKnown RBP11.28□□□□□ -0.6
TRAF4-215ENST00000584944 TNFRSF19Q9NS68 423 aa11.28□□□□□ -0.6
TRAF4-215ENST00000584944 DPM3Q9P2X0 92 aa11.28□□□□□ -0.6
TRAF4-215ENST00000584944 PSG11Q9UQ72 335 aa11.28□□□□□ -0.6
TRAF4-215ENST00000584944 A0A087X0M5 115 aa11.27□□□□□ -0.61
TRAF4-215ENST00000584944 A0A1B0GX30 115 aa11.27□□□□□ -0.61
TRAF4-215ENST00000584944 CTXN2P0C2S0 81 aa11.27□□□□□ -0.61
TRAF4-215ENST00000584944 CD34P28906 385 aa11.27□□□□□ -0.61
TRAF4-215ENST00000584944 BRS3P32247 399 aa11.27□□□□□ -0.61
TRAF4-215ENST00000584944 IL18Q14116 193 aa11.27□□□□□ -0.61
TRAF4-215ENST00000584944 HLA-DRB5Q30154 266 aa11.27□□□□□ -0.61
TRAF4-215ENST00000584944 Q3ZCU0 254 aa11.27□□□□□ -0.61
TRAF4-215ENST00000584944 PLA1AQ53H76 456 aa11.27□□□□□ -0.61
TRAF4-215ENST00000584944 HCP5Q6MZN7 132 aa11.27□□□□□ -0.61
TRAF4-215ENST00000584944 ZNF880Q6PDB4 577 aa11.27□□□□□ -0.61
TRAF4-215ENST00000584944 LAX1Q8IWV1 398 aa11.27□□□□□ -0.61
TRAF4-215ENST00000584944 MMP27Q9H306 513 aa11.27□□□□□ -0.61
TRAF4-215ENST00000584944 BATF3Q9NR55 127 aa11.27□□□□□ -0.61
TRAF4-215ENST00000584944 RABL2AQ9UBK7 228 aaPredicted RBP11.27□□□□□ -0.61
TRAF4-215ENST00000584944 ELF5Q9UKW6 265 aaPredicted RBP11.27□□□□□ -0.61
TRAF4-215ENST00000584944 RABL2BQ9UNT1 228 aa11.27□□□□□ -0.61
TRAF4-215ENST00000584944 KIAA2026Q5HYC2 2103 aa11.26□□□□□ -0.61
TRAF4-215ENST00000584944 A0A1W2PPE3 182 aa11.26□□□□□ -0.61
TRAF4-215ENST00000584944 ODF3BA8MYP8 253 aa11.26□□□□□ -0.61
TRAF4-215ENST00000584944 BUB1B-PAK6H3BSN5 160 aa11.26□□□□□ -0.61
TRAF4-215ENST00000584944 TRIM77I1YAP6 450 aa11.26□□□□□ -0.61
TRAF4-215ENST00000584944 CTDSP2O14595 271 aa11.26□□□□□ -0.61
TRAF4-215ENST00000584944 SCTP09683 121 aa11.26□□□□□ -0.61
TRAF4-215ENST00000584944 OR3A3P47888 321 aa11.26□□□□□ -0.61
TRAF4-215ENST00000584944 RAB7AP51149 207 aa11.26□□□□□ -0.61
TRAF4-215ENST00000584944 SRSF7Q16629 238 aaKnown RBP eCLIP11.26□□□□□ -0.61
TRAF4-215ENST00000584944 CNIH2Q6PI25 160 aa11.26□□□□□ -0.61
TRAF4-215ENST00000584944 LHFPL4Q7Z7J7 247 aa11.26□□□□□ -0.61
TRAF4-215ENST00000584944 BEST4Q8NFU0 473 aa11.26□□□□□ -0.61
TRAF4-215ENST00000584944 CAPSLQ8WWF8 208 aa11.26□□□□□ -0.61
TRAF4-215ENST00000584944 FCAMRQ8WWV6 532 aa11.26□□□□□ -0.61
TRAF4-215ENST00000584944 GCDHQ92947 438 aaPredicted RBP11.26□□□□□ -0.61
TRAF4-215ENST00000584944 ABHD14AQ9BUJ0 271 aa11.26□□□□□ -0.61
TRAF4-215ENST00000584944 SLIRPQ9GZT3 109 aaKnown RBP11.26□□□□□ -0.61
TRAF4-215ENST00000584944 SCPEP1Q9HB40 452 aa11.26□□□□□ -0.61
TRAF4-215ENST00000584944 ZNF221Q9UK13 617 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms