RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 IFT22Q9H7X7 185 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 FN3KRPQ9HA64 309 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 BEX1Q9HBH7 125 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 MYOZ1Q9NP98 299 aaPredicted RBP8.52□□□□□ -1.05
SS18-221ENST00000582448 CA10Q9NS85 328 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 C1orf123Q9NWV4 160 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 ETAA1Q9NY74 926 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 RASL12Q9NYN1 266 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 TAAR3PQ9P1P4 343 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 ANXA10Q9UJ72 324 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 MGAT4AQ9UM21 535 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 FLVCR2Q9UPI3 526 aa8.52□□□□□ -1.05
SS18-221ENST00000582448 DYSFO75923 2080 aa8.51□□□□□ -1.05
SS18-221ENST00000582448 A0A0B4J293 547 aa8.51□□□□□ -1.05
SS18-221ENST00000582448 A0A1B0GWJ7 208 aa8.51□□□□□ -1.05
SS18-221ENST00000582448 B9A039 149 aa8.51□□□□□ -1.05
SS18-221ENST00000582448 LYNX1G3V0Z9 82 aa8.51□□□□□ -1.05
SS18-221ENST00000582448 RHBDL1O75783 438 aa8.51□□□□□ -1.05
SS18-221ENST00000582448 LYNX1P0DP58 116 aa8.51□□□□□ -1.05
SS18-221ENST00000582448 ANXA7P20073 488 aaKnown RBP8.51□□□□□ -1.05
SS18-221ENST00000582448 GLRA1P23415 457 aa8.51□□□□□ -1.05
SS18-221ENST00000582448 CD200P41217 278 aa8.51□□□□□ -1.05
SS18-221ENST00000582448 MAB21L1Q13394 359 aa8.51□□□□□ -1.05
SS18-221ENST00000582448 SURF2Q15527 256 aaPredicted RBP8.51□□□□□ -1.05
SS18-221ENST00000582448 ADIPOQQ15848 244 aa8.51□□□□□ -1.05
SS18-221ENST00000582448 SRSF7Q16629 238 aaKnown RBP eCLIP8.51□□□□□ -1.05
SS18-221ENST00000582448 ZFP69Q49AA0 526 aa8.51□□□□□ -1.05
SS18-221ENST00000582448 PAN3Q58A45 887 aaKnown RBP8.51□□□□□ -1.05
SS18-221ENST00000582448 IGFL4Q6B9Z1 124 aa8.51□□□□□ -1.05
SS18-221ENST00000582448 PEG10Q86TG7 708 aaKnown RBP8.51□□□□□ -1.05
SS18-221ENST00000582448 WDR86Q86TI4 376 aa8.51□□□□□ -1.05
SS18-221ENST00000582448 SUMF2Q8NBJ7 301 aa8.51□□□□□ -1.05
SS18-221ENST00000582448 OR11L1Q8NGX0 322 aa8.51□□□□□ -1.05
SS18-221ENST00000582448 GTF3AQ92664 365 aaKnown RBP8.51□□□□□ -1.05
SS18-221ENST00000582448 DPCDQ9BVM2 203 aaPredicted RBP8.51□□□□□ -1.05
SS18-221ENST00000582448 TLNRD1Q9H1K6 362 aa8.51□□□□□ -1.05
SS18-221ENST00000582448 NARFLQ9H6Q4 476 aa8.51□□□□□ -1.05
SS18-221ENST00000582448 LPAR2Q9HBW0 351 aa8.51□□□□□ -1.05
SS18-221ENST00000582448 UFSP2Q9NUQ7 469 aa8.51□□□□□ -1.05
SS18-221ENST00000582448 RCC2Q9P258 522 aaKnown RBP8.51□□□□□ -1.05
SS18-221ENST00000582448 ZNF230Q9UIE0 474 aaPredicted RBP8.51□□□□□ -1.05
SS18-221ENST00000582448 ZNF222Q9UK12 451 aa8.51□□□□□ -1.05
SS18-221ENST00000582448 PLCE1Q9P212 2302 aa8.51□□□□□ -1.05
SS18-221ENST00000582448 LRRC30A6NM36 301 aa8.5□□□□□ -1.05
SS18-221ENST00000582448 F8VVB4 439 aa8.5□□□□□ -1.05
SS18-221ENST00000582448 F8VWA3 439 aa8.5□□□□□ -1.05
SS18-221ENST00000582448 BOLA2-SMG1P6H3BVE0 249 aa8.5□□□□□ -1.05
SS18-221ENST00000582448 SPRY3O43610 288 aa8.5□□□□□ -1.05
SS18-221ENST00000582448 CTXN2P0C2S0 81 aa8.5□□□□□ -1.05
SS18-221ENST00000582448 ZNF735P0CB33 412 aa8.5□□□□□ -1.05
SS18-221ENST00000582448 ANXA3P12429 323 aa8.5□□□□□ -1.05
SS18-221ENST00000582448 IRF2P14316 349 aa8.5□□□□□ -1.05
SS18-221ENST00000582448 DUSP1P28562 367 aa8.5□□□□□ -1.05
SS18-221ENST00000582448 GMFBP60983 142 aa8.5□□□□□ -1.05
SS18-221ENST00000582448 ERVK11-1P61568 191 aa8.5□□□□□ -1.05
SS18-221ENST00000582448 TNFAIP6P98066 277 aaPredicted RBP8.5□□□□□ -1.05
SS18-221ENST00000582448 PDCD1Q15116 288 aa8.5□□□□□ -1.05
SS18-221ENST00000582448 PRAMEF6Q5VXH4 476 aa8.5□□□□□ -1.05
SS18-221ENST00000582448 FAHD2BQ6P2I3 314 aaPredicted RBP8.5□□□□□ -1.05
SS18-221ENST00000582448 Q6ZR03 302 aa8.5□□□□□ -1.05
SS18-221ENST00000582448 MOB1BQ7L9L4 216 aa8.5□□□□□ -1.05
SS18-221ENST00000582448 FAM90A1Q86YD7 464 aa8.5□□□□□ -1.05
SS18-221ENST00000582448 OR10Z1Q8NGY1 313 aa8.5□□□□□ -1.05
SS18-221ENST00000582448 MAFIPQ8WZ33 124 aa8.5□□□□□ -1.05
SS18-221ENST00000582448 ERGIC1Q969X5 290 aa8.5□□□□□ -1.05
SS18-221ENST00000582448 FAHD2AQ96GK7 314 aa8.5□□□□□ -1.05
SS18-221ENST00000582448 MRPL37Q9BZE1 423 aaKnown RBP8.5□□□□□ -1.05
SS18-221ENST00000582448 EGLN1Q9GZT9 426 aa8.5□□□□□ -1.05
SS18-221ENST00000582448 DYNLRB1Q9NP97 96 aa8.5□□□□□ -1.05
SS18-221ENST00000582448 DNAJB11Q9UBS4 358 aa8.5□□□□□ -1.05
SS18-221ENST00000582448 IL19Q9UHD0 177 aa8.5□□□□□ -1.05
SS18-221ENST00000582448 C14orf166Q9Y224 244 aaKnown RBP8.5□□□□□ -1.05
SS18-221ENST00000582448 ARFGEF3Q5TH69 2177 aa8.49□□□□□ -1.05
SS18-221ENST00000582448 IGHV3-64DA0A0J9YX35 117 aa8.49□□□□□ -1.05
SS18-221ENST00000582448 ZSCAN5BA6NJL1 495 aa8.49□□□□□ -1.05
SS18-221ENST00000582448 SIRPB1O00241 398 aa8.49□□□□□ -1.05
SS18-221ENST00000582448 HSPB6O14558 160 aa8.49□□□□□ -1.05
SS18-221ENST00000582448 TOX4O94842 621 aa8.49□□□□□ -1.05
SS18-221ENST00000582448 DIRAS3O95661 229 aa8.49□□□□□ -1.05
SS18-221ENST00000582448 HAND1O96004 215 aa8.49□□□□□ -1.05
SS18-221ENST00000582448 TK1P04183 234 aa8.49□□□□□ -1.05
SS18-221ENST00000582448 OR5H8P0DN80 308 aa8.49□□□□□ -1.05
SS18-221ENST00000582448 PGAM2P15259 253 aa8.49□□□□□ -1.05
SS18-221ENST00000582448 DVL1P1P54792 670 aaPredicted RBP8.49□□□□□ -1.05
SS18-221ENST00000582448 UBE2MP61081 183 aaKnown RBP8.49□□□□□ -1.05
SS18-221ENST00000582448 ZNF146Q15072 292 aa8.49□□□□□ -1.05
SS18-221ENST00000582448 ATPAF1Q5TC12 328 aaPredicted RBP8.49□□□□□ -1.05
SS18-221ENST00000582448 ZNF626Q68DY1 528 aa8.49□□□□□ -1.05
SS18-221ENST00000582448 LIN54Q6MZP7 749 aa8.49□□□□□ -1.05
SS18-221ENST00000582448 WDR82Q6UXN9 313 aa8.49□□□□□ -1.05
SS18-221ENST00000582448 Q6ZS49 121 aa8.49□□□□□ -1.05
SS18-221ENST00000582448 OVCH2Q7RTZ1 564 aa8.49□□□□□ -1.05
SS18-221ENST00000582448 RTN4RL2Q86UN3 420 aa8.49□□□□□ -1.05
SS18-221ENST00000582448 LRP11Q86VZ4 500 aa8.49□□□□□ -1.05
SS18-221ENST00000582448 PPP1R35Q8TAP8 253 aa8.49□□□□□ -1.05
SS18-221ENST00000582448 ZFAND1Q8TCF1 268 aa8.49□□□□□ -1.05
SS18-221ENST00000582448 ZNF431Q8TF32 576 aaPredicted RBP8.49□□□□□ -1.05
SS18-221ENST00000582448 ZNF418Q8TF45 676 aaPredicted RBP8.49□□□□□ -1.05
SS18-221ENST00000582448 LRRC29Q8WV35 223 aa8.49□□□□□ -1.05
SS18-221ENST00000582448 NEU4Q8WWR8 484 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms