RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 MGAT2Q10469 447 aa9.35□□□□□ -0.91
SEC22B-201ENST00000578049 DHRS13Q6UX07 377 aa9.35□□□□□ -0.91
SEC22B-201ENST00000578049 KCNK17Q96T54 332 aa9.35□□□□□ -0.91
SEC22B-201ENST00000578049 LIFP15018 202 aa9.35□□□□□ -0.91
SEC22B-201ENST00000578049 SCGB1D4Q6XE38 83 aa9.35□□□□□ -0.91
SEC22B-201ENST00000578049 STRCQ7RTU9 1775 aa9.35□□□□□ -0.91
SEC22B-201ENST00000578049 HIST1H1BP16401 226 aaKnown RBP9.35□□□□□ -0.91
SEC22B-201ENST00000578049 MFAP2P55001 183 aa9.35□□□□□ -0.91
SEC22B-201ENST00000578049 CEACAM21Q3KPI0 293 aa9.35□□□□□ -0.91
SEC22B-201ENST00000578049 RIPPLY2Q5TAB7 128 aa9.35□□□□□ -0.91
SEC22B-201ENST00000578049 TMEM70Q9BUB7 260 aa9.35□□□□□ -0.91
SEC22B-201ENST00000578049 C2CD4DB7Z1M9 353 aa9.35□□□□□ -0.91
SEC22B-201ENST00000578049 FUT5Q11128 374 aa9.35□□□□□ -0.91
SEC22B-201ENST00000578049 Q8WTZ3 238 aa9.35□□□□□ -0.91
SEC22B-201ENST00000578049 SSMEM1Q8WWF3 244 aa9.35□□□□□ -0.91
SEC22B-201ENST00000578049 TMEM45BQ96B21 275 aa9.35□□□□□ -0.91
SEC22B-201ENST00000578049 HSPB9Q9BQS6 159 aa9.35□□□□□ -0.91
SEC22B-201ENST00000578049 FOXQ1Q9C009 403 aa9.35□□□□□ -0.91
SEC22B-201ENST00000578049 PKIBQ9C010 78 aa9.35□□□□□ -0.91
SEC22B-201ENST00000578049 RNF7Q9UBF6 113 aa9.35□□□□□ -0.91
SEC22B-201ENST00000578049 C21orf140B9A014 251 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 KLF7O75840 302 aaPredicted RBP9.34□□□□□ -0.91
SEC22B-201ENST00000578049 LYZP61626 148 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 OR4X1Q8NH49 305 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 FLYWCH2Q96CP2 140 aaKnown RBP9.34□□□□□ -0.91
SEC22B-201ENST00000578049 WIPI2Q9Y4P8 454 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 TRPM6Q9BX84 2022 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 A0A0B4J293 547 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 GNG10P50151 68 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 GUSBP11Q6P575 273 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.34□□□□□ -0.91
SEC22B-201ENST00000578049 OR2D3Q8NGH3 330 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 ZNF721Q8TF20 911 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 PMCHL2Q9BQD1 86 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 RP1P56715 2156 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.34□□□□□ -0.91
SEC22B-201ENST00000578049 RHBDL1O75783 438 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 PIGYQ3MUY2 71 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 CXorf67Q86X51 503 aaPredicted RBP9.34□□□□□ -0.91
SEC22B-201ENST00000578049 TGIF2LYQ8IUE0 185 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 TGIF2LXQ8IUE1 241 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 C9orf40Q8IXQ3 194 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 POC1AQ8NBT0 407 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 RBM14Q96PK6 669 aaKnown RBP9.34□□□□□ -0.91
SEC22B-201ENST00000578049 ZNF665Q9H7R5 613 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 TMEM14DPA8MWL7 114 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 F12P00748 615 aaPredicted RBP9.34□□□□□ -0.91
SEC22B-201ENST00000578049 ZNF506Q5JVG8 444 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 ZPLD1Q8TCW7 415 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 IGHV3-43A0A0B4J1X8 118 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 LOC390937A0A1W2PQ73 354 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 CDIPTO14735 213 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 MGST3O14880 152 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 KBTBD11O94819 623 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 NTN1O95631 604 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 IGHV3-43DP0DP04 118 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 CA7P43166 264 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 RND3P61587 244 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 RGP1Q92546 391 aaPredicted RBP9.34□□□□□ -0.91
SEC22B-201ENST00000578049 RAB1CQ92928 201 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 RASL11BQ9BPW5 248 aa9.34□□□□□ -0.91
SEC22B-201ENST00000578049 J3QW42 95 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 EIF3GO75821 320 aaKnown RBP eCLIP9.33□□□□□ -0.92
SEC22B-201ENST00000578049 SLC25A47Q6Q0C1 308 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 Q6ZS52 159 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 OR1B1Q8NGR6 318 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 SLC25A40Q8TBP6 338 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 PILRAQ9UKJ1 303 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 J3QR06 171 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 GNG7O60262 68 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 COL9A1P20849 921 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 HIKESHIQ53FT3 197 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 SPNS3Q6ZMD2 512 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 GCSAMQ8N6F7 178 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 SNRNP40Q96DI7 357 aaKnown RBP9.33□□□□□ -0.92
SEC22B-201ENST00000578049 DDA1Q9BW61 102 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 TUBGCP6Q96RT7 1819 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 RAB29O14966 203 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 CSN3P07498 182 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 COX5BP10606 129 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 LRRC75AQ8NAA5 344 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 MYOZ3Q8TDC0 251 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 FBXO17Q96EF6 278 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 LHX9Q9NQ69 397 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 TSPAN2O60636 221 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 ZXDAP98168 799 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 SMIM8Q96KF7 97 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 GPR61Q9BZJ8 451 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 PXMP4Q9Y6I8 212 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 A0A087WWC5 75 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 KLF4O43474 513 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 TCF21O43680 179 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 OR4A8P0C604 315 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 PATE4P0C8F1 98 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 RUNX1Q01196 453 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 C5orf52A6NGY3 159 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 PEBP1P30086 187 aaKnown RBP9.33□□□□□ -0.92
SEC22B-201ENST00000578049 ZNF83P51522 516 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 HYAL1Q12794 435 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 LINC01590Q5TEZ4 76 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms