RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 MDKP21741 143 aaPredicted RBP5.61□□□□□ -1.51
SMG6-209ENST00000571442 HTR1DP28221 377 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 PPP1CCP36873 323 aaKnown RBP5.61□□□□□ -1.51
SMG6-209ENST00000571442 REG1BP48304 166 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 KRTAP10-3P60369 221 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 HLA-DRB3P79483 266 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 MADCAM1Q13477 382 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 MORN2Q502X0 79 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 AWAT1Q58HT5 328 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 C6orf183Q5T699 404 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 MINOS1Q5TGZ0 78 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 HIST2H2BDQ6DRA6 164 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 OR52W1Q6IF63 320 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 Q6ZSV7 163 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 GPR141Q7Z602 305 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 TMEM219Q86XT9 240 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 ODF3L1Q8IXM7 274 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 TMEM86BQ8N661 226 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 OR10A7Q8NGE5 316 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 OR52M1Q8NGK5 317 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 ZFAND2BQ8WV99 257 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 NUDCD2Q8WVJ2 157 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 CFHR4Q92496 578 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 GCDHQ92947 438 aaPredicted RBP5.61□□□□□ -1.51
SMG6-209ENST00000571442 ST6GALNAC6Q969X2 333 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 SLC25A46Q96AG3 418 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 MALSU1Q96EH3 234 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 CMSS1Q9BQ75 279 aaKnown RBP5.61□□□□□ -1.51
SMG6-209ENST00000571442 CHMP1AQ9HD42 196 aaPredicted RBP5.61□□□□□ -1.51
SMG6-209ENST00000571442 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.61□□□□□ -1.51
SMG6-209ENST00000571442 DPM3Q9P2X0 92 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 VPREB3Q9UKI3 123 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 SPATA2Q9UM82 520 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 POMT1Q9Y6A1 747 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 MINOS1-NBL1R4GNA1 71 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 IGHV3-72A0A0B4J1Y9 119 aa5.6□□□□□ -1.51
SMG6-209ENST00000571442 SH2D7A6NKC9 451 aaPredicted RBP5.6□□□□□ -1.51
SMG6-209ENST00000571442 FAM90A9PA6NNJ1 464 aa5.6□□□□□ -1.51
SMG6-209ENST00000571442 ZNF736B4DX44 427 aaPredicted RBP5.6□□□□□ -1.51
SMG6-209ENST00000571442 TOR1AO14656 332 aa5.6□□□□□ -1.51
SMG6-209ENST00000571442 ST8SIA5O15466 376 aa5.6□□□□□ -1.51
SMG6-209ENST00000571442 SPINT2O43291 252 aa5.6□□□□□ -1.51
SMG6-209ENST00000571442 PROP1O75360 226 aa5.6□□□□□ -1.51
SMG6-209ENST00000571442 EIF4EP06730 217 aaKnown RBP5.6□□□□□ -1.51
SMG6-209ENST00000571442 FCER2P06734 321 aa5.6□□□□□ -1.51
SMG6-209ENST00000571442 GSTT2P0CG29 244 aa5.6□□□□□ -1.51
SMG6-209ENST00000571442 GSTT2BP0CG30 244 aa5.6□□□□□ -1.51
SMG6-209ENST00000571442 ACTG1P63261 375 aa5.6□□□□□ -1.51
SMG6-209ENST00000571442 SRSF4Q08170 494 aaKnown RBP5.6□□□□□ -1.51
SMG6-209ENST00000571442 CDNFQ49AH0 187 aa5.6□□□□□ -1.51
SMG6-209ENST00000571442 IGSF11Q5DX21 431 aa5.6□□□□□ -1.51
SMG6-209ENST00000571442 C12orf54Q6X4T0 127 aa5.6□□□□□ -1.51
SMG6-209ENST00000571442 SLC25A48Q6ZT89 311 aaKnown RBP5.6□□□□□ -1.51
SMG6-209ENST00000571442 CLVS1Q8IUQ0 354 aaPredicted RBP5.6□□□□□ -1.51
SMG6-209ENST00000571442 LINC00311Q8N616 119 aa5.6□□□□□ -1.51
SMG6-209ENST00000571442 IL1F10Q8WWZ1 152 aa5.6□□□□□ -1.51
SMG6-209ENST00000571442 C5orf30Q96GV9 206 aa5.6□□□□□ -1.51
SMG6-209ENST00000571442 DCSTAMPQ9H295 470 aa5.6□□□□□ -1.51
SMG6-209ENST00000571442 IFI27L2Q9H2X8 130 aa5.6□□□□□ -1.51
SMG6-209ENST00000571442 DPAGT1Q9H3H5 408 aa5.6□□□□□ -1.51
SMG6-209ENST00000571442 C12orf4Q9NQ89 552 aa5.6□□□□□ -1.51
SMG6-209ENST00000571442 OR2S2Q9NQN1 319 aa5.6□□□□□ -1.51
SMG6-209ENST00000571442 ABRACLQ9P1F3 81 aa5.6□□□□□ -1.51
SMG6-209ENST00000571442 GNG12Q9UBI6 72 aa5.6□□□□□ -1.51
SMG6-209ENST00000571442 TCF19Q9Y242 345 aa5.6□□□□□ -1.51
SMG6-209ENST00000571442 SIGLEC9Q9Y336 463 aa5.6□□□□□ -1.51
SMG6-209ENST00000571442 ETV7Q9Y603 341 aa5.6□□□□□ -1.51
SMG6-209ENST00000571442 MGAM2Q2M2H8 2515 aa5.6□□□□□ -1.51
SMG6-209ENST00000571442 TENM1Q9UKZ4 2725 aa5.6□□□□□ -1.51
SMG6-209ENST00000571442 CMYA5Q8N3K9 4069 aa5.59□□□□□ -1.51
SMG6-209ENST00000571442 TRAV18A0A075B6X5 111 aa5.59□□□□□ -1.51
SMG6-209ENST00000571442 METTL21EPA6NDL7 271 aa5.59□□□□□ -1.51
SMG6-209ENST00000571442 LEUTXA8MZ59 168 aa5.59□□□□□ -1.51
SMG6-209ENST00000571442 H3BUI4 141 aa5.59□□□□□ -1.51
SMG6-209ENST00000571442 HSD17B6O14756 317 aa5.59□□□□□ -1.51
SMG6-209ENST00000571442 TIMM23O14925 209 aa5.59□□□□□ -1.51
SMG6-209ENST00000571442 YPEL1O60688 119 aa5.59□□□□□ -1.51
SMG6-209ENST00000571442 HPGDSO60760 199 aa5.59□□□□□ -1.51
SMG6-209ENST00000571442 AMY1AP04745 511 aa5.59□□□□□ -1.51
SMG6-209ENST00000571442 AMY2AP04746 511 aa5.59□□□□□ -1.51
SMG6-209ENST00000571442 RPL5P46777 297 aaKnown RBP5.59□□□□□ -1.51
SMG6-209ENST00000571442 OR3A3P47888 321 aa5.59□□□□□ -1.51
SMG6-209ENST00000571442 COMPP49747 757 aaPredicted RBP5.59□□□□□ -1.51
SMG6-209ENST00000571442 DYNLT3P51808 116 aa5.59□□□□□ -1.51
SMG6-209ENST00000571442 ZNF137PP52743 207 aa5.59□□□□□ -1.51
SMG6-209ENST00000571442 PRRX1P54821 245 aa5.59□□□□□ -1.51
SMG6-209ENST00000571442 SCAND1P57086 179 aa5.59□□□□□ -1.51
SMG6-209ENST00000571442 LINC00205P59089 165 aa5.59□□□□□ -1.51
SMG6-209ENST00000571442 HTD2P86397 168 aa5.59□□□□□ -1.51
SMG6-209ENST00000571442 HABP2Q14520 560 aaPredicted RBP5.59□□□□□ -1.51
SMG6-209ENST00000571442 AANATQ16613 207 aa5.59□□□□□ -1.51
SMG6-209ENST00000571442 HACD4Q5VWC8 232 aa5.59□□□□□ -1.51
SMG6-209ENST00000571442 TRAT1Q6PIZ9 186 aa5.59□□□□□ -1.51
SMG6-209ENST00000571442 ZNF554Q86TJ5 538 aa5.59□□□□□ -1.51
SMG6-209ENST00000571442 DRAM1Q8N682 238 aa5.59□□□□□ -1.51
SMG6-209ENST00000571442 GVQW1Q8N7I0 195 aa5.59□□□□□ -1.51
SMG6-209ENST00000571442 SAMD12Q8N8I0 201 aa5.59□□□□□ -1.51
SMG6-209ENST00000571442 C8orf31Q8N9H6 132 aa5.59□□□□□ -1.51
SMG6-209ENST00000571442 OR10X1Q8NGY0 326 aa5.59□□□□□ -1.51
SMG6-209ENST00000571442 OR56B4Q8NH76 319 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms