RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 ZNF420Q8TAQ5 688 aaPredicted RBP3.06□□□□□ -1.92
NUP88-202ENST00000570937 OR51E1Q8TCB6 317 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 CYGBQ8WWM9 190 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 OR5P3Q8WZ94 311 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 PIGCQ92535 297 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 C12orf43Q96C57 262 aaKnown RBP3.06□□□□□ -1.92
NUP88-202ENST00000570937 C10orf35Q96D05 121 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 CPNE2Q96FN4 548 aaPredicted RBP3.06□□□□□ -1.92
NUP88-202ENST00000570937 OR8B2Q96RD0 313 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 AMELYQ99218 206 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 TBX5Q99593 518 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 PATZ1Q9HBE1 687 aaKnown RBP3.06□□□□□ -1.92
NUP88-202ENST00000570937 LPAR2Q9HBW0 351 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 TMEM165Q9HC07 324 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 GPR84Q9NQS5 396 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 UFSP2Q9NUQ7 469 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 C1orf123Q9NWV4 160 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 FAM206AQ9NX38 181 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 RASL12Q9NYN1 266 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 PLCE1Q9P212 2302 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 RABL2AQ9UBK7 228 aaPredicted RBP3.06□□□□□ -1.92
NUP88-202ENST00000570937 CLN8Q9UBY8 286 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 NUFIP1Q9UHK0 495 aaKnown RBP3.06□□□□□ -1.92
NUP88-202ENST00000570937 GNG8Q9UK08 70 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 OR52A1Q9UKL2 312 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 SLC7A11Q9UPY5 501 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 PIGLQ9Y2B2 252 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 POLDIP2Q9Y2S7 368 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 KLHDC2Q9Y2U9 406 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 CACNG2Q9Y698 323 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 HSPE1-MOB4S4R3N1 261 aa3.06□□□□□ -1.92
NUP88-202ENST00000570937 ARFGEF3Q5TH69 2177 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 IGHV3-64DA0A0J9YX35 117 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 EFCAB10A6NFE3 127 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 CEACAM18A8MTB9 384 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 ZNF732B4DXR9 585 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 H0YJX3 145 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 J3QLW9 94 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 K7EQG2 157 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 M0R129 80 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 CDIPTO14735 213 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 NDUFB3O43676 98 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 CYB5AP00167 134 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 LHBP01229 141 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 TTRP02766 147 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 ISG15P05161 165 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 HTR1AP08908 422 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 WNT2P09544 360 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 DNAH10OSP0CZ25 163 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 PPIAL4GP0DN37 164 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 PSKH1P11801 424 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 GP9P14770 177 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 ZNF19P17023 458 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 PRKACBP22694 351 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 DCKP27707 260 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 HSPA13P48723 471 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 PITPNBP48739 271 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 RBP2P50120 134 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 GPM6AP51674 278 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 BPIFB3P59826 476 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 CTAG1AP78358 180 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 LCN2P80188 198 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 SLC34A1Q06495 639 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 MPPED2Q15777 294 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 CCDC58Q4VC31 144 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 ARMCX4Q5H9R4 360 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 PLCXD3Q63HM9 321 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 LPCAT4Q643R3 524 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 HAGHLQ6PII5 290 aaPredicted RBP3.05□□□□□ -1.92
NUP88-202ENST00000570937 Q6ZVQ6 151 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 Q8IYB0 196 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 ENTHD1Q8IYW4 607 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 C8orf59Q8N0T1 100 aaPredicted RBP3.05□□□□□ -1.92
NUP88-202ENST00000570937 ZNF676Q8N7Q3 588 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 DEFB108BQ8NET1 73 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 ZNF418Q8TF45 676 aaPredicted RBP3.05□□□□□ -1.92
NUP88-202ENST00000570937 LRRC29Q8WV35 223 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 PP6455Q8WZ26 134 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 RORBQ92753 470 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 TMIGD2Q96BF3 282 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 PPP1R14BQ96C90 147 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 MBOAT4Q96T53 435 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 SLC29A1Q99808 456 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 TMEM246Q9BRR3 403 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 TTTY10Q9BZA0 68 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 COMMD4Q9H0A8 199 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 DNTTIP1Q9H147 329 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 TLNRD1Q9H1K6 362 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 C5orf66Q9H5L9 145 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 METTL17Q9H7H0 456 aaPredicted RBP3.05□□□□□ -1.92
NUP88-202ENST00000570937 ACOXLQ9NUZ1 547 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 ZNF319Q9P2F9 582 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 UBQLN2Q9UHD9 624 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 GLS2Q9UI32 602 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 MRM2Q9UI43 246 aaKnown RBP3.05□□□□□ -1.92
NUP88-202ENST00000570937 HHLA2Q9UM44 414 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 COPS3Q9UNS2 423 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 SLC22A13Q9Y226 551 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 AUP1Q9Y679 476 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms