RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 TRAV1-2A0A0B4J238 106 aa10.39□□□□□ -0.75
CNOT1-220ENST00000569916 IGHV1-3A0A0C4DH29 117 aa10.39□□□□□ -0.75
CNOT1-220ENST00000569916 FOXI3A8MTJ6 420 aaPredicted RBP10.39□□□□□ -0.75
CNOT1-220ENST00000569916 CCRL2O00421 344 aa10.39□□□□□ -0.75
CNOT1-220ENST00000569916 SOCS1O15524 211 aa10.39□□□□□ -0.75
CNOT1-220ENST00000569916 NAPSAO96009 420 aa10.39□□□□□ -0.75
CNOT1-220ENST00000569916 FAM106CPP0CH98 169 aa10.39□□□□□ -0.75
CNOT1-220ENST00000569916 BLVRBP30043 206 aaPredicted RBP10.39□□□□□ -0.75
CNOT1-220ENST00000569916 VDAC2P45880 294 aaPredicted RBP10.39□□□□□ -0.75
CNOT1-220ENST00000569916 REG1BP48304 166 aa10.39□□□□□ -0.75
CNOT1-220ENST00000569916 ZNF134P52741 427 aa10.39□□□□□ -0.75
CNOT1-220ENST00000569916 OR10A3P58181 314 aa10.39□□□□□ -0.75
CNOT1-220ENST00000569916 GNMTQ14749 295 aa10.39□□□□□ -0.75
CNOT1-220ENST00000569916 HMGN3Q15651 99 aa10.39□□□□□ -0.75
CNOT1-220ENST00000569916 C2orf68Q2NKX9 166 aa10.39□□□□□ -0.75
CNOT1-220ENST00000569916 ARSJQ5FYB0 599 aaPredicted RBP10.39□□□□□ -0.75
CNOT1-220ENST00000569916 SLC25A48Q6ZT89 311 aaKnown RBP10.39□□□□□ -0.75
CNOT1-220ENST00000569916 FAM89BQ8N5H3 189 aa10.39□□□□□ -0.75
CNOT1-220ENST00000569916 FAM3DQ96BQ1 224 aa10.39□□□□□ -0.75
CNOT1-220ENST00000569916 URM1Q9BTM9 101 aaKnown RBP10.39□□□□□ -0.75
CNOT1-220ENST00000569916 MMP27Q9H306 513 aa10.39□□□□□ -0.75
CNOT1-220ENST00000569916 KCNIP1Q9NZI2 227 aa10.39□□□□□ -0.75
CNOT1-220ENST00000569916 MOB4Q9Y3A3 225 aa10.39□□□□□ -0.75
CNOT1-220ENST00000569916 LRRC42Q9Y546 428 aa10.39□□□□□ -0.75
CNOT1-220ENST00000569916 SH2D7A6NKC9 451 aaPredicted RBP10.38□□□□□ -0.75
CNOT1-220ENST00000569916 M0QZK8 103 aa10.38□□□□□ -0.75
CNOT1-220ENST00000569916 LDLRAD4O15165 306 aa10.38□□□□□ -0.75
CNOT1-220ENST00000569916 IGKV1D-33P01593 117 aa10.38□□□□□ -0.75
CNOT1-220ENST00000569916 IGKV1-33P01594 117 aa10.38□□□□□ -0.75
CNOT1-220ENST00000569916 GAPDHP04406 335 aaKnown RBP10.38□□□□□ -0.75
CNOT1-220ENST00000569916 GALP22466 123 aa10.38□□□□□ -0.75
CNOT1-220ENST00000569916 IL3RAP26951 378 aa10.38□□□□□ -0.75
CNOT1-220ENST00000569916 PSMB9P28065 219 aa10.38□□□□□ -0.75
CNOT1-220ENST00000569916 PSMD7P51665 324 aa10.38□□□□□ -0.75
CNOT1-220ENST00000569916 ZNF137PP52743 207 aa10.38□□□□□ -0.75
CNOT1-220ENST00000569916 PLA2G7Q13093 441 aa10.38□□□□□ -0.75
CNOT1-220ENST00000569916 C2orf76Q3KRA6 126 aa10.38□□□□□ -0.75
CNOT1-220ENST00000569916 ABCA11PQ4W5N1 156 aa10.38□□□□□ -0.75
CNOT1-220ENST00000569916 CT45A1Q5HYN5 189 aa10.38□□□□□ -0.75
CNOT1-220ENST00000569916 HES5Q5TA89 166 aa10.38□□□□□ -0.75
CNOT1-220ENST00000569916 ZNF880Q6PDB4 577 aa10.38□□□□□ -0.75
CNOT1-220ENST00000569916 ZNF773Q6PK81 442 aa10.38□□□□□ -0.75
CNOT1-220ENST00000569916 OR52L2PQ8NGH6 319 aa10.38□□□□□ -0.75
CNOT1-220ENST00000569916 CT45A3Q8NHU0 189 aa10.38□□□□□ -0.75
CNOT1-220ENST00000569916 RTN4IP1Q8WWV3 396 aaPredicted RBP10.38□□□□□ -0.75
CNOT1-220ENST00000569916 FCGR1BQ92637 280 aa10.38□□□□□ -0.75
CNOT1-220ENST00000569916 OR2S2Q9NQN1 319 aa10.38□□□□□ -0.75
CNOT1-220ENST00000569916 STEAP1Q9UHE8 339 aa10.38□□□□□ -0.75
CNOT1-220ENST00000569916 JPT1Q9UK76 154 aa10.38□□□□□ -0.75
CNOT1-220ENST00000569916 MEGF8Q7Z7M0 2845 aa10.37□□□□□ -0.75
CNOT1-220ENST00000569916 IGHV3-72A0A0B4J1Y9 119 aa10.37□□□□□ -0.75
CNOT1-220ENST00000569916 TMEM272A0A1B0GTI8 110 aa10.37□□□□□ -0.75
CNOT1-220ENST00000569916 IFITM5A6NNB3 132 aa10.37□□□□□ -0.75
CNOT1-220ENST00000569916 PDCD5O14737 125 aa10.37□□□□□ -0.75
CNOT1-220ENST00000569916 FBXO24O75426 580 aa10.37□□□□□ -0.75
CNOT1-220ENST00000569916 LPLP06858 475 aa10.37□□□□□ -0.75
CNOT1-220ENST00000569916 CD28P10747 220 aa10.37□□□□□ -0.75
CNOT1-220ENST00000569916 TMEM11P17152 192 aa10.37□□□□□ -0.75
CNOT1-220ENST00000569916 MYL9P24844 172 aa10.37□□□□□ -0.75
CNOT1-220ENST00000569916 PPP1CCP36873 323 aaKnown RBP10.37□□□□□ -0.75
CNOT1-220ENST00000569916 TMEM50BP56557 158 aa10.37□□□□□ -0.75
CNOT1-220ENST00000569916 HTD2P86397 168 aa10.37□□□□□ -0.75
CNOT1-220ENST00000569916 EBI3Q14213 229 aa10.37□□□□□ -0.75
CNOT1-220ENST00000569916 HES1Q14469 280 aa10.37□□□□□ -0.75
CNOT1-220ENST00000569916 MORN2Q502X0 79 aa10.37□□□□□ -0.75
CNOT1-220ENST00000569916 C22orf42Q6IC83 251 aa10.37□□□□□ -0.75
CNOT1-220ENST00000569916 MOB3BQ86TA1 216 aa10.37□□□□□ -0.75
CNOT1-220ENST00000569916 IZUMO1Q8IYV9 350 aa10.37□□□□□ -0.75
CNOT1-220ENST00000569916 HDHD3Q9BSH5 251 aaPredicted RBP10.37□□□□□ -0.75
CNOT1-220ENST00000569916 PLEKHJ1Q9NW61 149 aa10.37□□□□□ -0.75
CNOT1-220ENST00000569916 AK3Q9UIJ7 227 aa10.37□□□□□ -0.75
CNOT1-220ENST00000569916 HSF4Q9ULV5 492 aa10.37□□□□□ -0.75
CNOT1-220ENST00000569916 WNK1Q9H4A3 2382 aa10.37□□□□□ -0.75
CNOT1-220ENST00000569916 TRBV6-6A0A0A6YYG2 114 aa10.36□□□□□ -0.75
CNOT1-220ENST00000569916 TXNL1O43396 289 aa10.36□□□□□ -0.75
CNOT1-220ENST00000569916 YPEL1O60688 119 aa10.36□□□□□ -0.75
CNOT1-220ENST00000569916 PEX14O75381 377 aa10.36□□□□□ -0.75
CNOT1-220ENST00000569916 CSF1P09603 554 aa10.36□□□□□ -0.75
CNOT1-220ENST00000569916 RAB3BP20337 219 aa10.36□□□□□ -0.75
CNOT1-220ENST00000569916 FGF9P31371 208 aaPredicted RBP10.36□□□□□ -0.75
CNOT1-220ENST00000569916 RANBP1P43487 201 aa10.36□□□□□ -0.75
CNOT1-220ENST00000569916 VEGFCP49767 419 aa10.36□□□□□ -0.75
CNOT1-220ENST00000569916 PLAC9Q5JTB6 97 aa10.36□□□□□ -0.75
CNOT1-220ENST00000569916 STEAP3Q658P3 488 aa10.36□□□□□ -0.75
CNOT1-220ENST00000569916 MOB1BQ7L9L4 216 aa10.36□□□□□ -0.75
CNOT1-220ENST00000569916 NR2C2APQ86WQ0 139 aa10.36□□□□□ -0.75
CNOT1-220ENST00000569916 ODF3L1Q8IXM7 274 aa10.36□□□□□ -0.75
CNOT1-220ENST00000569916 Q8N6K4 173 aa10.36□□□□□ -0.75
CNOT1-220ENST00000569916 C5orf56Q8N8D9 126 aa10.36□□□□□ -0.75
CNOT1-220ENST00000569916 OR56B1Q8NGI3 324 aa10.36□□□□□ -0.75
CNOT1-220ENST00000569916 GALMQ96C23 342 aa10.36□□□□□ -0.75
CNOT1-220ENST00000569916 ARHGAP5-AS1Q96IT6 56 aa10.36□□□□□ -0.75
CNOT1-220ENST00000569916 EAF1Q96JC9 268 aaPredicted RBP10.36□□□□□ -0.75
CNOT1-220ENST00000569916 YPEL2Q96QA6 119 aa10.36□□□□□ -0.75
CNOT1-220ENST00000569916 ABHD14AQ9BUJ0 271 aa10.36□□□□□ -0.75
CNOT1-220ENST00000569916 PECRQ9BY49 303 aa10.36□□□□□ -0.75
CNOT1-220ENST00000569916 CHMP1AQ9HD42 196 aaPredicted RBP10.36□□□□□ -0.75
CNOT1-220ENST00000569916 TXNL4BQ9NX01 149 aaKnown RBP10.36□□□□□ -0.75
CNOT1-220ENST00000569916 ADARB2-AS1A8MUL3 147 aa10.35□□□□□ -0.75
CNOT1-220ENST00000569916 FGF16O43320 207 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms