RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 PPP1R35Q8TAP8 253 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 KLF14Q8TD94 323 aaPredicted RBP4.86□□□□□ -1.63
CDH13-213ENST00000569454 RDH5Q92781 318 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 LSM10Q969L4 123 aaKnown RBP4.86□□□□□ -1.63
CDH13-213ENST00000569454 LINC00052Q96N35 136 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 TP53RKQ96S44 253 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 SFXN3Q9BWM7 321 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 ARV1Q9H2C2 271 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 NARFLQ9H6Q4 476 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 PLEKHF2Q9H8W4 249 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 HES4Q9HCC6 221 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 ZNF71Q9NQZ8 489 aaPredicted RBP4.86□□□□□ -1.63
CDH13-213ENST00000569454 PRR13Q9NZ81 148 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 ZNF581Q9P0T4 197 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 ZNF629Q9UEG4 869 aaPredicted RBP4.86□□□□□ -1.63
CDH13-213ENST00000569454 PURGQ9UJV8 347 aaKnown RBP4.86□□□□□ -1.63
CDH13-213ENST00000569454 TRAPPC2LQ9UL33 140 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 LAMP3Q9UQV4 416 aa4.86□□□□□ -1.63
CDH13-213ENST00000569454 MYO7BQ6PIF6 2116 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 IGHV2OR16-5A0A0B4J2B6 119 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 BTBD17A6NE02 478 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 OOEPA6NGQ2 149 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 UMAD1C9J7I0 102 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 FAM90A26D6RGX4 464 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 MKRN2OSH3BPM6 223 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 WRBO00258 174 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 SLC33A1O00400 549 aaPredicted RBP4.85□□□□□ -1.63
CDH13-213ENST00000569454 HSPA12AO43301 675 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 MED6O75586 246 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 TNFSF13O75888 250 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 DFFBO76075 338 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 LY86O95711 162 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 PTBP3O95758 552 aaKnown RBP4.85□□□□□ -1.63
CDH13-213ENST00000569454 OR2H2O95918 312 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 HAND1O96004 215 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 CGAP01215 116 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 CECR9P0C854 216 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 FAM157CP0CG43 387 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 CFHR2P36980 270 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 CAV2P51636 162 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 PSG7Q13046 419 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 CATR1Q13166 79 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 SP6Q3SY56 376 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 MIDNQ504T8 468 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 KRBOX4Q5JUW0 171 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 TIMM23BQ5SRD1 257 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 SPATA46Q5T0L3 261 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 C1orf185Q5T7R7 199 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 ZNF324BQ6AW86 544 aaPredicted RBP4.85□□□□□ -1.63
CDH13-213ENST00000569454 RPL7L1Q6DKI1 246 aaKnown RBP4.85□□□□□ -1.63
CDH13-213ENST00000569454 SLC35E4Q6ICL7 350 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 PCSK4Q6UW60 755 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 Q6ZPA2 131 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 ZNF818PQ6ZRF7 136 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 STX12Q86Y82 276 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 FAM219AQ8IW50 185 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 FOXRED2Q8IWF2 684 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 SELENOHQ8IZQ5 122 aaKnown RBP4.85□□□□□ -1.63
CDH13-213ENST00000569454 OR2C3Q8N628 320 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 WDR31Q8NA23 367 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 OR1S2Q8NGQ3 325 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 OR11L1Q8NGX0 322 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 OR10Z1Q8NGY1 313 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 NINJ1Q92982 152 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 GNPNAT1Q96EK6 184 aaPredicted RBP4.85□□□□□ -1.63
CDH13-213ENST00000569454 NARS2Q96I59 477 aaKnown RBP4.85□□□□□ -1.63
CDH13-213ENST00000569454 RAB40CQ96S21 281 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 GINS3Q9BRX5 216 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 SEC11CQ9BY50 192 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 TOLLIPQ9H0E2 274 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 SMDT1Q9H4I9 107 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 OR2S2Q9NQN1 319 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 LYRM2Q9NU23 88 aaPredicted RBP4.85□□□□□ -1.63
CDH13-213ENST00000569454 COA4Q9NYJ1 87 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 CRIM1Q9NZV1 1036 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 IL36RNQ9UBH0 155 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 CACFD1Q9UGQ2 172 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 CARHSP1Q9Y2V2 147 aaKnown RBP4.85□□□□□ -1.63
CDH13-213ENST00000569454 MSRB2Q9Y3D2 182 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 MED13Q9UHV7 2174 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 DNAJC13O75165 2243 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 ZNF407Q9C0G0 2248 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 MTORP42345 2549 aa4.85□□□□□ -1.63
CDH13-213ENST00000569454 CCDC168Q8NDH2 2452 aa4.84□□□□□ -1.63
CDH13-213ENST00000569454 IGKV1D-13A0A0B4J2D9 117 aa4.84□□□□□ -1.63
CDH13-213ENST00000569454 IGHV1-18A0A0C4DH31 117 aa4.84□□□□□ -1.63
CDH13-213ENST00000569454 IGKV1-6A0A0C4DH72 117 aa4.84□□□□□ -1.63
CDH13-213ENST00000569454 TMEM218A2RU14 115 aa4.84□□□□□ -1.63
CDH13-213ENST00000569454 A6NLC8 198 aa4.84□□□□□ -1.63
CDH13-213ENST00000569454 LGALS8O00214 317 aa4.84□□□□□ -1.63
CDH13-213ENST00000569454 SIRPB1O00241 398 aa4.84□□□□□ -1.63
CDH13-213ENST00000569454 HSPB6O14558 160 aa4.84□□□□□ -1.63
CDH13-213ENST00000569454 CDIPTO14735 213 aa4.84□□□□□ -1.63
CDH13-213ENST00000569454 HS3ST1O14792 307 aa4.84□□□□□ -1.63
CDH13-213ENST00000569454 TM4SF5O14894 197 aa4.84□□□□□ -1.63
CDH13-213ENST00000569454 LILRA1O75019 489 aa4.84□□□□□ -1.63
CDH13-213ENST00000569454 PGLYRP1O75594 196 aaPredicted RBP4.84□□□□□ -1.63
CDH13-213ENST00000569454 RHBDL1O75783 438 aa4.84□□□□□ -1.63
CDH13-213ENST00000569454 SNAPINO95295 136 aa4.84□□□□□ -1.63
CDH13-213ENST00000569454 CRYAAP02489 173 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms