RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 ABHD1Q96SE0 405 aa13.11□□□□□ -0.31
USB1-215ENST00000569252 TBX15Q96SF7 602 aa13.11□□□□□ -0.31
USB1-215ENST00000569252 GINS4Q9BRT9 223 aa13.11□□□□□ -0.31
USB1-215ENST00000569252 CLEC7AQ9BXN2 247 aa13.11□□□□□ -0.31
USB1-215ENST00000569252 MS4A7Q9GZW8 240 aaPredicted RBP13.11□□□□□ -0.31
USB1-215ENST00000569252 NUP50Q9UKX7 468 aa13.11□□□□□ -0.31
USB1-215ENST00000569252 TENM1Q9UKZ4 2725 aa13.11□□□□□ -0.31
USB1-215ENST00000569252 GABARAPH6UMI1 98 aa13.1□□□□□ -0.31
USB1-215ENST00000569252 F2RL2O00254 374 aa13.1□□□□□ -0.31
USB1-215ENST00000569252 SSX5O60225 188 aa13.1□□□□□ -0.31
USB1-215ENST00000569252 AVPP01185 164 aa13.1□□□□□ -0.31
USB1-215ENST00000569252 ARG1P05089 322 aa13.1□□□□□ -0.31
USB1-215ENST00000569252 SCTP09683 121 aa13.1□□□□□ -0.31
USB1-215ENST00000569252 GSTT2P0CG29 244 aa13.1□□□□□ -0.31
USB1-215ENST00000569252 GSTT2BP0CG30 244 aa13.1□□□□□ -0.31
USB1-215ENST00000569252 CEACAM6P40199 344 aa13.1□□□□□ -0.31
USB1-215ENST00000569252 OR3A3P47888 321 aa13.1□□□□□ -0.31
USB1-215ENST00000569252 ACTBP60709 375 aa13.1□□□□□ -0.31
USB1-215ENST00000569252 ACTG1P63261 375 aa13.1□□□□□ -0.31
USB1-215ENST00000569252 Q6ZS49 121 aa13.1□□□□□ -0.31
USB1-215ENST00000569252 C11orf42Q8N5U0 333 aa13.1□□□□□ -0.31
USB1-215ENST00000569252 CREB3L1Q96BA8 519 aa13.1□□□□□ -0.31
USB1-215ENST00000569252 CYYR1Q96J86 154 aa13.1□□□□□ -0.31
USB1-215ENST00000569252 SLC23A1Q9UHI7 598 aa13.1□□□□□ -0.31
USB1-215ENST00000569252 ANXA10Q9UJ72 324 aa13.1□□□□□ -0.31
USB1-215ENST00000569252 JPT1Q9UK76 154 aa13.1□□□□□ -0.31
USB1-215ENST00000569252 ARHGAP32A7KAX9 2087 aa13.09□□□□□ -0.31
USB1-215ENST00000569252 TRAV40A0A0B4J280 105 aa13.09□□□□□ -0.31
USB1-215ENST00000569252 IGHV1-69DA0A0B4J2H0 117 aa13.09□□□□□ -0.31
USB1-215ENST00000569252 CENPVL3A0A0U1RRI6 287 aa13.09□□□□□ -0.31
USB1-215ENST00000569252 MEIOCA2RUB1 952 aa13.09□□□□□ -0.31
USB1-215ENST00000569252 BET1O15155 118 aa13.09□□□□□ -0.31
USB1-215ENST00000569252 CTDSPLO15194 276 aa13.09□□□□□ -0.31
USB1-215ENST00000569252 WIPF1O43516 503 aa13.09□□□□□ -0.31
USB1-215ENST00000569252 MMP23AO75900 390 aa13.09□□□□□ -0.31
USB1-215ENST00000569252 IGHV1-69P01742 117 aa13.09□□□□□ -0.31
USB1-215ENST00000569252 RCVRNP35243 200 aa13.09□□□□□ -0.31
USB1-215ENST00000569252 RNASE12Q5GAN4 147 aaKnown RBP13.09□□□□□ -0.31
USB1-215ENST00000569252 CCDC190Q86UF4 302 aa13.09□□□□□ -0.31
USB1-215ENST00000569252 GVQW1Q8N7I0 195 aa13.09□□□□□ -0.31
USB1-215ENST00000569252 OR10X1Q8NGY0 326 aa13.09□□□□□ -0.31
USB1-215ENST00000569252 OR9G1Q8NH87 305 aa13.09□□□□□ -0.31
USB1-215ENST00000569252 GPX8Q8TED1 209 aa13.09□□□□□ -0.31
USB1-215ENST00000569252 S100ZQ8WXG8 99 aa13.09□□□□□ -0.31
USB1-215ENST00000569252 NECAP2Q9NVZ3 263 aa13.09□□□□□ -0.31
USB1-215ENST00000569252 GFOD1Q9NXC2 390 aa13.09□□□□□ -0.31
USB1-215ENST00000569252 FAM96BQ9Y3D0 163 aa13.09□□□□□ -0.31
USB1-215ENST00000569252 IGHV3OR16-10A0A075B7F0 116 aa13.08□□□□□ -0.32
USB1-215ENST00000569252 IGHV2-26A0A0B4J1V2 119 aa13.08□□□□□ -0.32
USB1-215ENST00000569252 IGHV3-43A0A0B4J1X8 118 aa13.08□□□□□ -0.32
USB1-215ENST00000569252 A0A1W2PRD5 423 aa13.08□□□□□ -0.32
USB1-215ENST00000569252 A0A1W2PRF3 423 aa13.08□□□□□ -0.32
USB1-215ENST00000569252 A0A1W2PRM7 423 aa13.08□□□□□ -0.32
USB1-215ENST00000569252 FAM172BPA6NC97 362 aa13.08□□□□□ -0.32
USB1-215ENST00000569252 FCER2P06734 321 aa13.08□□□□□ -0.32
USB1-215ENST00000569252 IGHV3-43DP0DP04 118 aa13.08□□□□□ -0.32
USB1-215ENST00000569252 INPP1P49441 399 aa13.08□□□□□ -0.32
USB1-215ENST00000569252 TAS2R46P59540 309 aa13.08□□□□□ -0.32
USB1-215ENST00000569252 ZNF45Q02386 682 aa13.08□□□□□ -0.32
USB1-215ENST00000569252 SSBP1Q04837 148 aaKnown RBP13.08□□□□□ -0.32
USB1-215ENST00000569252 Q3ZCU0 254 aa13.08□□□□□ -0.32
USB1-215ENST00000569252 OR52L2PQ8NGH6 319 aa13.08□□□□□ -0.32
USB1-215ENST00000569252 OR10V1Q8NGI7 309 aa13.08□□□□□ -0.32
USB1-215ENST00000569252 OR52I2Q8NH67 350 aa13.08□□□□□ -0.32
USB1-215ENST00000569252 EDARADDQ8WWZ3 215 aa13.08□□□□□ -0.32
USB1-215ENST00000569252 GCDHQ92947 438 aaPredicted RBP13.08□□□□□ -0.32
USB1-215ENST00000569252 TAS2R8Q9NYW2 309 aa13.08□□□□□ -0.32
USB1-215ENST00000569252 AMMECR1Q9Y4X0 333 aaPredicted RBP13.08□□□□□ -0.32
USB1-215ENST00000569252 RBM7Q9Y580 266 aaKnown RBP13.08□□□□□ -0.32
USB1-215ENST00000569252 A0A087X0M5 115 aa13.07□□□□□ -0.32
USB1-215ENST00000569252 A0A1B0GX30 115 aa13.07□□□□□ -0.32
USB1-215ENST00000569252 RNASEK-C17orf49H0YIS7 233 aa13.07□□□□□ -0.32
USB1-215ENST00000569252 NPFFO15130 113 aa13.07□□□□□ -0.32
USB1-215ENST00000569252 YPEL1O60688 119 aa13.07□□□□□ -0.32
USB1-215ENST00000569252 DIRAS3O95661 229 aa13.07□□□□□ -0.32
USB1-215ENST00000569252 SRD5A1P18405 259 aa13.07□□□□□ -0.32
USB1-215ENST00000569252 IL3RAP26951 378 aa13.07□□□□□ -0.32
USB1-215ENST00000569252 CEACAM3P40198 252 aa13.07□□□□□ -0.32
USB1-215ENST00000569252 ETV6P41212 452 aa13.07□□□□□ -0.32
USB1-215ENST00000569252 GNG10P50151 68 aa13.07□□□□□ -0.32
USB1-215ENST00000569252 DLX1P56177 255 aa13.07□□□□□ -0.32
USB1-215ENST00000569252 PRB3Q04118 309 aaPredicted RBP13.07□□□□□ -0.32
USB1-215ENST00000569252 KLRD1Q13241 179 aa13.07□□□□□ -0.32
USB1-215ENST00000569252 MORN2Q502X0 79 aa13.07□□□□□ -0.32
USB1-215ENST00000569252 MIDNQ504T8 468 aa13.07□□□□□ -0.32
USB1-215ENST00000569252 C1orf229Q6ZS94 237 aaPredicted RBP13.07□□□□□ -0.32
USB1-215ENST00000569252 Q8N402 240 aa13.07□□□□□ -0.32
USB1-215ENST00000569252 OR2AK2Q8NG84 335 aa13.07□□□□□ -0.32
USB1-215ENST00000569252 OR11H6Q8NGC7 330 aa13.07□□□□□ -0.32
USB1-215ENST00000569252 OR5AP2Q8NGF4 316 aa13.07□□□□□ -0.32
USB1-215ENST00000569252 OR5H2Q8NGV7 314 aa13.07□□□□□ -0.32
USB1-215ENST00000569252 TNFRSF14Q92956 283 aa13.07□□□□□ -0.32
USB1-215ENST00000569252 YPEL2Q96QA6 119 aa13.07□□□□□ -0.32
USB1-215ENST00000569252 SOSTQ9BQB4 213 aa13.07□□□□□ -0.32
USB1-215ENST00000569252 ZNF69Q9UC07 566 aa13.07□□□□□ -0.32
USB1-215ENST00000569252 MTFP1Q9UDX5 166 aa13.07□□□□□ -0.32
USB1-215ENST00000569252 J3QR06 171 aa13.06□□□□□ -0.32
USB1-215ENST00000569252 IGHV3-7P01780 117 aa13.06□□□□□ -0.32
USB1-215ENST00000569252 IFNA6P05013 189 aa13.06□□□□□ -0.32
USB1-215ENST00000569252 IGHV4-38-2P0DP08 117 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms