RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 Q6YL49 198 aa9.89□□□□□ -0.83
SF3B3-208ENST00000567250 TMEM86BQ8N661 226 aa9.89□□□□□ -0.83
SF3B3-208ENST00000567250 OR4P4Q8NGL7 312 aa9.89□□□□□ -0.83
SF3B3-208ENST00000567250 OR1L1Q8NH94 360 aa9.89□□□□□ -0.83
SF3B3-208ENST00000567250 UBALD1Q8TB05 177 aa9.89□□□□□ -0.83
SF3B3-208ENST00000567250 DYNC2LI1Q8TCX1 351 aa9.89□□□□□ -0.83
SF3B3-208ENST00000567250 IL1F10Q8WWZ1 152 aa9.89□□□□□ -0.83
SF3B3-208ENST00000567250 ZNF48Q96MX3 618 aaPredicted RBP9.89□□□□□ -0.83
SF3B3-208ENST00000567250 NDUFA13Q9P0J0 144 aa9.89□□□□□ -0.83
SF3B3-208ENST00000567250 JMJD1CQ15652 2540 aa9.89□□□□□ -0.83
SF3B3-208ENST00000567250 IGHV3-43A0A0B4J1X8 118 aa9.88□□□□□ -0.83
SF3B3-208ENST00000567250 MDFIC2A0A1B0GVS7 189 aa9.88□□□□□ -0.83
SF3B3-208ENST00000567250 DNAJC9-AS1A6NH13 148 aa9.88□□□□□ -0.83
SF3B3-208ENST00000567250 OOSP1A8MZH6 123 aa9.88□□□□□ -0.83
SF3B3-208ENST00000567250 TRDCB7Z8K6 153 aa9.88□□□□□ -0.83
SF3B3-208ENST00000567250 CLDN34H7C241 214 aa9.88□□□□□ -0.83
SF3B3-208ENST00000567250 J3QR06 171 aa9.88□□□□□ -0.83
SF3B3-208ENST00000567250 RGS5O15539 181 aa9.88□□□□□ -0.83
SF3B3-208ENST00000567250 HSPA12AO43301 675 aa9.88□□□□□ -0.83
SF3B3-208ENST00000567250 DIRAS3O95661 229 aa9.88□□□□□ -0.83
SF3B3-208ENST00000567250 MELTFP08582 738 aa9.88□□□□□ -0.83
SF3B3-208ENST00000567250 IGHV3-43DP0DP04 118 aa9.88□□□□□ -0.83
SF3B3-208ENST00000567250 ZBTB25P24278 435 aa9.88□□□□□ -0.83
SF3B3-208ENST00000567250 LOXL3P58215 753 aa9.88□□□□□ -0.83
SF3B3-208ENST00000567250 MADCAM1Q13477 382 aa9.88□□□□□ -0.83
SF3B3-208ENST00000567250 LRRC75BQ2VPJ9 315 aa9.88□□□□□ -0.83
SF3B3-208ENST00000567250 CCDC144NLQ6NUI1 221 aa9.88□□□□□ -0.83
SF3B3-208ENST00000567250 BAIAP2L2Q6UXY1 529 aa9.88□□□□□ -0.83
SF3B3-208ENST00000567250 Q6ZS49 121 aa9.88□□□□□ -0.83
SF3B3-208ENST00000567250 PRIMA1Q86XR5 153 aa9.88□□□□□ -0.83
SF3B3-208ENST00000567250 OR4A4PQ8NGN8 299 aa9.88□□□□□ -0.83
SF3B3-208ENST00000567250 OR10X1Q8NGY0 326 aa9.88□□□□□ -0.83
SF3B3-208ENST00000567250 OR5R1Q8NH85 324 aa9.88□□□□□ -0.83
SF3B3-208ENST00000567250 ZFAND2BQ8WV99 257 aa9.88□□□□□ -0.83
SF3B3-208ENST00000567250 NUDCD2Q8WVJ2 157 aa9.88□□□□□ -0.83
SF3B3-208ENST00000567250 EDARADDQ8WWZ3 215 aa9.88□□□□□ -0.83
SF3B3-208ENST00000567250 CYYR1Q96J86 154 aa9.88□□□□□ -0.83
SF3B3-208ENST00000567250 RBM38Q9H0Z9 239 aaKnown RBP9.88□□□□□ -0.83
SF3B3-208ENST00000567250 ABCB10Q9NRK6 738 aa9.88□□□□□ -0.83
SF3B3-208ENST00000567250 DPM3Q9P2X0 92 aa9.88□□□□□ -0.83
SF3B3-208ENST00000567250 PSG11Q9UQ72 335 aa9.88□□□□□ -0.83
SF3B3-208ENST00000567250 ZFHX3Q15911 3703 aa9.87□□□□□ -0.83
SF3B3-208ENST00000567250 FAM25AB3EWG3 89 aa9.87□□□□□ -0.83
SF3B3-208ENST00000567250 FAM25CB3EWG5 89 aa9.87□□□□□ -0.83
SF3B3-208ENST00000567250 FAM25GB3EWG6 89 aa9.87□□□□□ -0.83
SF3B3-208ENST00000567250 BUB1B-PAK6H3BSN5 160 aa9.87□□□□□ -0.83
SF3B3-208ENST00000567250 FABP7O15540 132 aa9.87□□□□□ -0.83
SF3B3-208ENST00000567250 HOXA3O43365 443 aaPredicted RBP9.87□□□□□ -0.83
SF3B3-208ENST00000567250 TXNL1O43396 289 aa9.87□□□□□ -0.83
SF3B3-208ENST00000567250 YPEL1O60688 119 aa9.87□□□□□ -0.83
SF3B3-208ENST00000567250 EIF4EP06730 217 aaKnown RBP9.87□□□□□ -0.83
SF3B3-208ENST00000567250 CBX5P45973 191 aa9.87□□□□□ -0.83
SF3B3-208ENST00000567250 TAS2R20P59543 309 aa9.87□□□□□ -0.83
SF3B3-208ENST00000567250 LY6G6FQ5SQ64 297 aa9.87□□□□□ -0.83
SF3B3-208ENST00000567250 Q6ZPA2 131 aa9.87□□□□□ -0.83
SF3B3-208ENST00000567250 LHFPL4Q7Z7J7 247 aa9.87□□□□□ -0.83
SF3B3-208ENST00000567250 LINC00311Q8N616 119 aa9.87□□□□□ -0.83
SF3B3-208ENST00000567250 OR2AK2Q8NG84 335 aa9.87□□□□□ -0.83
SF3B3-208ENST00000567250 OR10V1Q8NGI7 309 aa9.87□□□□□ -0.83
SF3B3-208ENST00000567250 C15orf40Q8WUR7 153 aa9.87□□□□□ -0.83
SF3B3-208ENST00000567250 TOMM40LQ969M1 308 aa9.87□□□□□ -0.83
SF3B3-208ENST00000567250 RPEQ96AT9 228 aa9.87□□□□□ -0.83
SF3B3-208ENST00000567250 YPEL2Q96QA6 119 aa9.87□□□□□ -0.83
SF3B3-208ENST00000567250 OCSTAMPQ9BR26 566 aa9.87□□□□□ -0.83
SF3B3-208ENST00000567250 ABHD14AQ9BUJ0 271 aa9.87□□□□□ -0.83
SF3B3-208ENST00000567250 MEGF9Q9H1U4 602 aa9.87□□□□□ -0.83
SF3B3-208ENST00000567250 AUNIPQ9H7T9 357 aa9.87□□□□□ -0.83
SF3B3-208ENST00000567250 VGLL3A8MV65 326 aa9.86□□□□□ -0.83
SF3B3-208ENST00000567250 HPGDSO60760 199 aa9.86□□□□□ -0.83
SF3B3-208ENST00000567250 IGHV3-7P01780 117 aa9.86□□□□□ -0.83
SF3B3-208ENST00000567250 BRS3P32247 399 aa9.86□□□□□ -0.83
SF3B3-208ENST00000567250 IER3P46695 156 aa9.86□□□□□ -0.83
SF3B3-208ENST00000567250 RAB7AP51149 207 aa9.86□□□□□ -0.83
SF3B3-208ENST00000567250 RPL15P61313 204 aaKnown RBP9.86□□□□□ -0.83
SF3B3-208ENST00000567250 UBA52P62987 128 aaKnown RBP9.86□□□□□ -0.83
SF3B3-208ENST00000567250 SLC9A3R2Q15599 337 aa9.86□□□□□ -0.83
SF3B3-208ENST00000567250 SSX2Q16385 188 aa9.86□□□□□ -0.83
SF3B3-208ENST00000567250 MORN2Q502X0 79 aa9.86□□□□□ -0.83
SF3B3-208ENST00000567250 SLC25A48Q6ZT89 311 aaKnown RBP9.86□□□□□ -0.83
SF3B3-208ENST00000567250 IZUMO1Q8IYV9 350 aa9.86□□□□□ -0.83
SF3B3-208ENST00000567250 OR52L2PQ8NGH6 319 aa9.86□□□□□ -0.83
SF3B3-208ENST00000567250 FAM216AQ8WUB2 273 aa9.86□□□□□ -0.83
SF3B3-208ENST00000567250 LEAP2Q969E1 77 aa9.86□□□□□ -0.83
SF3B3-208ENST00000567250 CABLES2Q9BTV7 478 aa9.86□□□□□ -0.83
SF3B3-208ENST00000567250 C6orf62Q9GZU0 229 aaPredicted RBP9.86□□□□□ -0.83
SF3B3-208ENST00000567250 IFT46Q9NQC8 304 aa9.86□□□□□ -0.83
SF3B3-208ENST00000567250 SLC23A1Q9UHI7 598 aa9.86□□□□□ -0.83
SF3B3-208ENST00000567250 VPREB3Q9UKI3 123 aa9.86□□□□□ -0.83
SF3B3-208ENST00000567250 SOX21Q9Y651 276 aaPredicted RBP9.86□□□□□ -0.83
SF3B3-208ENST00000567250 H3BUX3 64 aa9.85□□□□□ -0.83
SF3B3-208ENST00000567250 HSD17B6O14756 317 aa9.85□□□□□ -0.83
SF3B3-208ENST00000567250 TPPPO94811 219 aa9.85□□□□□ -0.83
SF3B3-208ENST00000567250 VENTXO95231 258 aa9.85□□□□□ -0.83
SF3B3-208ENST00000567250 RNASE1P07998 156 aaKnown RBP9.85□□□□□ -0.83
SF3B3-208ENST00000567250 SCTP09683 121 aa9.85□□□□□ -0.83
SF3B3-208ENST00000567250 CTXN2P0C2S0 81 aa9.85□□□□□ -0.83
SF3B3-208ENST00000567250 ELK1P19419 428 aa9.85□□□□□ -0.83
SF3B3-208ENST00000567250 PPP1CCP36873 323 aaKnown RBP9.85□□□□□ -0.83
SF3B3-208ENST00000567250 DYNLT3P51808 116 aa9.85□□□□□ -0.83
SF3B3-208ENST00000567250 GNMTQ14749 295 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms