RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 CHMP1AQ9HD42 196 aaPredicted RBP5.06□□□□□ -1.6
TCF4-228ENST00000565393 PLCXD1Q9NUJ7 323 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 LIN7CQ9NUP9 197 aaKnown RBP5.06□□□□□ -1.6
TCF4-228ENST00000565393 CNOT2Q9NZN8 540 aaKnown RBP5.06□□□□□ -1.6
TCF4-228ENST00000565393 ABRACLQ9P1F3 81 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 GHRLQ9UBU3 117 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 ZMAT5Q9UDW3 170 aaKnown RBP5.06□□□□□ -1.6
TCF4-228ENST00000565393 LRRC42Q9Y546 428 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 WI2-2373I1.2A0A1W2PRP0 233 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 FAM90A10PA6NDY2 464 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 FAM90A7PA6NKC0 464 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 FAM90A23PA8MXZ1 464 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 ANKRD65E5RJM6 399 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 K7EIL1 84 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 TXNL1O43396 289 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 PDCD6O75340 191 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 CA11O75493 328 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 RGS11O94810 467 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 CD1AP06126 327 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 GNAO1P09471 354 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 SRMP19623 302 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 FSTP19883 344 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 SLC6A1P30531 599 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 PPP1CCP36873 323 aaKnown RBP5.05□□□□□ -1.6
TCF4-228ENST00000565393 INSL4Q14641 139 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 KIR2DS1Q14954 304 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 MED22Q15528 200 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 TMEM30BQ3MIR4 351 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 VAX1Q5SQQ9 334 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 OR10K2Q6IF99 312 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 LAIR2Q6ISS4 152 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 LIN54Q6MZP7 749 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 IZUMO1Q8IYV9 350 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 MS4A15Q8N5U1 240 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 Q8N6K4 173 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 NKAIN3Q8N8D7 197 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 IL1F10Q8WWZ1 152 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 THRSPQ92748 146 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 ZNF251Q9BRH9 671 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 UQCC2Q9BRT2 126 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 CST11Q9H112 138 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 PLSCR3Q9NRY6 295 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 SCN3BQ9NY72 215 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 STEAP1Q9UHE8 339 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 WSB1Q9Y6I7 421 aa5.05□□□□□ -1.6
TCF4-228ENST00000565393 TET2Q6N021 2002 aaPredicted RBP5.04□□□□□ -1.6
TCF4-228ENST00000565393 LANCL1O43813 399 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 YPEL1O60688 119 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 CDK1P06493 297 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 ELANEP08246 267 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 UBBP0CG47 229 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 HSMCR30P0CW71 290 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 VSIG8P0DPA2 414 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 SLC2A2P11168 524 aaPredicted RBP5.04□□□□□ -1.6
TCF4-228ENST00000565393 HTR2CP28335 458 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 BLVRBP30043 206 aaPredicted RBP5.04□□□□□ -1.6
TCF4-228ENST00000565393 CDX1P47902 265 aaPredicted RBP5.04□□□□□ -1.6
TCF4-228ENST00000565393 GP2P55259 537 aaKnown RBP5.04□□□□□ -1.6
TCF4-228ENST00000565393 HTD2P86397 168 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 DGCR2P98153 550 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 CD69Q07108 199 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 FOXE3Q13461 319 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 GNMTQ14749 295 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 SPHARQ15513 63 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 MMDQ15546 238 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 HSD17B12Q53GQ0 312 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 RBM48Q5RL73 367 aaKnown RBP5.04□□□□□ -1.6
TCF4-228ENST00000565393 C6orf141Q5SZD1 244 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 FAM27D1Q5T7N8 215 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 OGFRL1Q5TC84 451 aaPredicted RBP5.04□□□□□ -1.6
TCF4-228ENST00000565393 SIGIRRQ6IA17 410 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 ETV3LQ6ZN32 361 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 C6orf201Q7Z4U5 140 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 ZNF439Q8NDP4 499 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 OR5M8Q8NGP6 311 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 OR8U1Q8NH10 309 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 KCNG3Q8TAE7 436 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 TMEM203Q969S6 136 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 RAX2Q96IS3 184 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 RITA1Q96K30 269 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 Q96M66 194 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 YPEL2Q96QA6 119 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 P2RX4Q99571 388 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 HSPB9Q9BQS6 159 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 MND1Q9BWT6 205 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 CCDC90BQ9GZT6 254 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 MBNL3Q9NUK0 354 aaKnown RBP5.04□□□□□ -1.6
TCF4-228ENST00000565393 PLEKHJ1Q9NW61 149 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 RCC2Q9P258 522 aaKnown RBP5.04□□□□□ -1.6
TCF4-228ENST00000565393 ZNF107Q9UII5 783 aaPredicted RBP5.04□□□□□ -1.6
TCF4-228ENST00000565393 TPRKBQ9Y3C4 175 aa5.04□□□□□ -1.6
TCF4-228ENST00000565393 MGAM2Q2M2H8 2515 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 H7C2Y5 167 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 RAMP3O60896 148 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 SC5DO75845 299 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 IGHG4P01861 327 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 GSTP1P09211 210 aaKnown RBP5.03□□□□□ -1.6
TCF4-228ENST00000565393 OR5H8P0DN80 308 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 MYF6P23409 242 aa5.03□□□□□ -1.6
TCF4-228ENST00000565393 CEACAM6P40199 344 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms