RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 GFOD1Q9NXC2 390 aa21.13■□□□□ 0.97
NME3-208ENST00000565379 SOX21Q9Y651 276 aaPredicted RBP21.13■□□□□ 0.97
NME3-208ENST00000565379 IGHV2-26A0A0B4J1V2 119 aa21.12■□□□□ 0.97
NME3-208ENST00000565379 RGS11O94810 467 aa21.12■□□□□ 0.97
NME3-208ENST00000565379 LPLP06858 475 aa21.12■□□□□ 0.97
NME3-208ENST00000565379 NFYBP25208 207 aa21.12■□□□□ 0.97
NME3-208ENST00000565379 CNPY1Q3B7I2 92 aa21.12■□□□□ 0.97
NME3-208ENST00000565379 MIDNQ504T8 468 aa21.12■□□□□ 0.97
NME3-208ENST00000565379 HCP5Q6MZN7 132 aa21.12■□□□□ 0.97
NME3-208ENST00000565379 C9orf139Q6ZV77 190 aa21.12■□□□□ 0.97
NME3-208ENST00000565379 BCL6BQ8N143 479 aaPredicted RBP21.12■□□□□ 0.97
NME3-208ENST00000565379 ABHD12Q8N2K0 398 aa21.12■□□□□ 0.97
NME3-208ENST00000565379 PNKDQ8N490 385 aa21.12■□□□□ 0.97
NME3-208ENST00000565379 OR1L1Q8NH94 360 aa21.12■□□□□ 0.97
NME3-208ENST00000565379 ZNF596Q8TC21 504 aa21.12■□□□□ 0.97
NME3-208ENST00000565379 ST6GALNAC5Q9BVH7 336 aa21.12■□□□□ 0.97
NME3-208ENST00000565379 SUCNR1Q9BXA5 334 aa21.12■□□□□ 0.97
NME3-208ENST00000565379 OR2S2Q9NQN1 319 aa21.12■□□□□ 0.97
NME3-208ENST00000565379 IGHV3OR16-10A0A075B7F0 116 aa21.11■□□□□ 0.97
NME3-208ENST00000565379 FABP7O15540 132 aa21.11■□□□□ 0.97
NME3-208ENST00000565379 IGHV4-38-2P0DP08 117 aa21.11■□□□□ 0.97
NME3-208ENST00000565379 GDNFP39905 211 aa21.11■□□□□ 0.97
NME3-208ENST00000565379 PRRX1P54821 245 aa21.11■□□□□ 0.97
NME3-208ENST00000565379 LOXL3P58215 753 aa21.11■□□□□ 0.97
NME3-208ENST00000565379 LY6G6FQ5SQ64 297 aa21.11■□□□□ 0.97
NME3-208ENST00000565379 HOGA1Q86XE5 327 aa21.11■□□□□ 0.97
NME3-208ENST00000565379 SNX29P2Q8IUI4 249 aa21.11■□□□□ 0.97
NME3-208ENST00000565379 ZDHHC22Q8N966 263 aa21.11■□□□□ 0.97
NME3-208ENST00000565379 C8orf31Q8N9H6 132 aa21.11■□□□□ 0.97
NME3-208ENST00000565379 OR9G1Q8NH87 305 aa21.11■□□□□ 0.97
NME3-208ENST00000565379 MS4A7Q9GZW8 240 aaPredicted RBP21.11■□□□□ 0.97
NME3-208ENST00000565379 GNG12Q9UBI6 72 aa21.11■□□□□ 0.97
NME3-208ENST00000565379 ZNF69Q9UC07 566 aa21.11■□□□□ 0.97
NME3-208ENST00000565379 ZNF230Q9UIE0 474 aaPredicted RBP21.11■□□□□ 0.97
NME3-208ENST00000565379 TOR1AO14656 332 aa21.1■□□□□ 0.97
NME3-208ENST00000565379 CTXN2P0C2S0 81 aa21.1■□□□□ 0.97
NME3-208ENST00000565379 COX7A1P24310 79 aa21.1■□□□□ 0.97
NME3-208ENST00000565379 PTBP1P26599 531 aaKnown RBP eCLIP21.1■□□□□ 0.97
NME3-208ENST00000565379 LTC4SQ16873 150 aa21.1■□□□□ 0.97
NME3-208ENST00000565379 ZNF626Q68DY1 528 aa21.1■□□□□ 0.97
NME3-208ENST00000565379 LINC00299Q6ZSB3 139 aa21.1■□□□□ 0.97
NME3-208ENST00000565379 BEND2Q8NDZ0 799 aa21.1■□□□□ 0.97
NME3-208ENST00000565379 OR6Q1Q8NGQ2 317 aa21.1■□□□□ 0.97
NME3-208ENST00000565379 CREB3L1Q96BA8 519 aa21.1■□□□□ 0.97
NME3-208ENST00000565379 IFT46Q9NQC8 304 aa21.1■□□□□ 0.97
NME3-208ENST00000565379 FABP12A6NFH5 140 aa21.09■□□□□ 0.97
NME3-208ENST00000565379 NPFFO15130 113 aa21.09■□□□□ 0.97
NME3-208ENST00000565379 CTDSPLO15194 276 aa21.09■□□□□ 0.97
NME3-208ENST00000565379 YPEL1O60688 119 aa21.09■□□□□ 0.97
NME3-208ENST00000565379 SCTP09683 121 aa21.09■□□□□ 0.97
NME3-208ENST00000565379 ZBTB25P24278 435 aa21.09■□□□□ 0.97
NME3-208ENST00000565379 LGALS4P56470 323 aa21.09■□□□□ 0.97
NME3-208ENST00000565379 KLRD1Q13241 179 aa21.09■□□□□ 0.97
NME3-208ENST00000565379 IL18Q14116 193 aa21.09■□□□□ 0.97
NME3-208ENST00000565379 GPX8Q8TED1 209 aa21.09■□□□□ 0.97
NME3-208ENST00000565379 IL1F10Q8WWZ1 152 aa21.09■□□□□ 0.97
NME3-208ENST00000565379 YPEL2Q96QA6 119 aa21.09■□□□□ 0.97
NME3-208ENST00000565379 PTTG2Q9NZH5 202 aa21.09■□□□□ 0.97
NME3-208ENST00000565379 TBL2Q9Y4P3 447 aaKnown RBP21.09■□□□□ 0.97
NME3-208ENST00000565379 ODF3BA8MYP8 253 aa21.08■□□□□ 0.97
NME3-208ENST00000565379 ARG1P05089 322 aa21.08■□□□□ 0.97
NME3-208ENST00000565379 PTHLHP12272 177 aa21.08■□□□□ 0.97
NME3-208ENST00000565379 DLX1P56177 255 aa21.08■□□□□ 0.97
NME3-208ENST00000565379 SPANXN2Q5MJ10 180 aa21.08■□□□□ 0.97
NME3-208ENST00000565379 SIGLECL1Q8N7X8 197 aa21.08■□□□□ 0.97
NME3-208ENST00000565379 BEST4Q8NFU0 473 aa21.08■□□□□ 0.97
NME3-208ENST00000565379 UBALD1Q8TB05 177 aa21.08■□□□□ 0.97
NME3-208ENST00000565379 DUX5Q96PT3 197 aa21.08■□□□□ 0.97
NME3-208ENST00000565379 ABHD1Q96SE0 405 aa21.08■□□□□ 0.97
NME3-208ENST00000565379 SOSTQ9BQB4 213 aa21.08■□□□□ 0.97
NME3-208ENST00000565379 CABLES2Q9BTV7 478 aa21.08■□□□□ 0.97
NME3-208ENST00000565379 ANXA10Q9UJ72 324 aa21.08■□□□□ 0.97
NME3-208ENST00000565379 ANAPC10Q9UM13 185 aa21.08■□□□□ 0.97
NME3-208ENST00000565379 GSTT2P0CG29 244 aa21.07■□□□□ 0.96
NME3-208ENST00000565379 GSTT2BP0CG30 244 aa21.07■□□□□ 0.96
NME3-208ENST00000565379 ACTG1P63261 375 aa21.07■□□□□ 0.96
NME3-208ENST00000565379 MINOS1Q5TGZ0 78 aa21.07■□□□□ 0.96
NME3-208ENST00000565379 CCDC190Q86UF4 302 aa21.07■□□□□ 0.96
NME3-208ENST00000565379 PDZD9Q8IXQ8 264 aa21.07■□□□□ 0.96
NME3-208ENST00000565379 LINC00311Q8N616 119 aa21.07■□□□□ 0.96
NME3-208ENST00000565379 FCAMRQ8WWV6 532 aa21.07■□□□□ 0.96
NME3-208ENST00000565379 MAFIPQ8WZ33 124 aa21.07■□□□□ 0.96
NME3-208ENST00000565379 ZNF48Q96MX3 618 aaPredicted RBP21.07■□□□□ 0.96
NME3-208ENST00000565379 PSG11Q9UQ72 335 aa21.07■□□□□ 0.96
NME3-208ENST00000565379 AMMECR1Q9Y4X0 333 aaPredicted RBP21.07■□□□□ 0.96
NME3-208ENST00000565379 MINOS1-NBL1R4GNA1 71 aa21.07■□□□□ 0.96
NME3-208ENST00000565379 GABARAPH6UMI1 98 aa21.06■□□□□ 0.96
NME3-208ENST00000565379 J3QR06 171 aa21.06■□□□□ 0.96
NME3-208ENST00000565379 HSPA12AO43301 675 aa21.06■□□□□ 0.96
NME3-208ENST00000565379 NAT1P18440 290 aa21.06■□□□□ 0.96
NME3-208ENST00000565379 ETV6P41212 452 aa21.06■□□□□ 0.96
NME3-208ENST00000565379 SSBP1Q04837 148 aaKnown RBP21.06■□□□□ 0.96
NME3-208ENST00000565379 TUSC1Q2TAM9 212 aa21.06■□□□□ 0.96
NME3-208ENST00000565379 MORN2Q502X0 79 aa21.06■□□□□ 0.96
NME3-208ENST00000565379 FAM131AQ6UXB0 335 aa21.06■□□□□ 0.96
NME3-208ENST00000565379 OR10J5Q8NHC4 309 aa21.06■□□□□ 0.96
NME3-208ENST00000565379 TOLLIPQ9H0E2 274 aa21.06■□□□□ 0.96
NME3-208ENST00000565379 IGHV3-43A0A0B4J1X8 118 aa21.05■□□□□ 0.96
NME3-208ENST00000565379 MEIOCA2RUB1 952 aa21.05■□□□□ 0.96
NME3-208ENST00000565379 ITGB1BP1O14713 200 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms