RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 TRGV5A0A0B4J1U4 118 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 CTXND1A0A1B0GTU2 59 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 A6NLC8 198 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 CDRT15L2A8MXV6 281 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 MASP2O00187 686 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 RAB29O14966 203 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 SPINT2O43291 252 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 CST7O76096 145 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 PTBP3O95758 552 aaKnown RBP6.5□□□□□ -1.37
ATXN3-249ENST00000564606 IFNA10P01566 189 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 RFPL3SP0C7P2 107 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 METTL15P1P0C7V9 234 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 PPP1CCP36873 323 aaKnown RBP6.5□□□□□ -1.37
ATXN3-249ENST00000564606 ATP5IP56385 69 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-249ENST00000564606 RPS23P62266 143 aaKnown RBP6.5□□□□□ -1.37
ATXN3-249ENST00000564606 SIGLEC14Q08ET2 396 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 ICAM4Q14773 271 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 HAGHQ16775 308 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 TMEM241Q24JQ0 296 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 CXorf66Q5JRM2 361 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-249ENST00000564606 DCAF10Q5QP82 559 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 ZNF468Q5VIY5 522 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-249ENST00000564606 ZNF497Q6ZNH5 498 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 CENPVQ7Z7K6 275 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-249ENST00000564606 RTN4RL2Q86UN3 420 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 FAM90A1Q86YD7 464 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 ZFP82Q8N141 532 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 C17orf78Q8N4C9 275 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 TMEM217Q8N7C4 229 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 SUMF1Q8NBK3 374 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 NAXEQ8NCW5 288 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 IL1F10Q8WWZ1 152 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 CORO2AQ92828 525 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 MUCL1Q96DR8 90 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 MESP1Q9BRJ9 268 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 TMEM204Q9BSN7 226 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 MRPL37Q9BZE1 423 aaKnown RBP6.5□□□□□ -1.37
ATXN3-249ENST00000564606 SH3BGRL3Q9H299 93 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 CXXC4Q9H2H0 198 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 C12orf49Q9H741 205 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 MBNL3Q9NUK0 354 aaKnown RBP6.5□□□□□ -1.37
ATXN3-249ENST00000564606 GFOD1Q9NXC2 390 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 GNG13Q9P2W3 67 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 CACNG5Q9UF02 275 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 OR14J1Q9UGF5 321 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 PITPNC1Q9UKF7 332 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 RNF115Q9Y4L5 304 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 LIPGQ9Y5X9 500 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 KNL1Q8NG31 2342 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 PCNX3Q9H6A9 2034 aa6.5□□□□□ -1.37
ATXN3-249ENST00000564606 FER1L5A0AVI2 2057 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 A0A096LPE4 126 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 A0A1W2PPZ6 126 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 MAP1LC3B2A6NCE7 125 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 ZNF727A8MUV8 499 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 IQCF6A8MYZ5 107 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 F6UZH7 168 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 TSTD3H0UI37 97 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 HS3ST1O14792 307 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 SIGLEC5O15389 551 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 PDE6DO43924 150 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 NEURL1O76050 574 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 CLDN14O95500 239 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 PATE4P0C8F1 98 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 PGA5P0DJD9 388 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 TDGF1P13385 188 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 CD99P14209 185 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 GZMHP20718 246 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 EPHA1P21709 976 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 GCH1P30793 250 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 SRP14P37108 136 aaKnown RBP6.49□□□□□ -1.37
ATXN3-249ENST00000564606 CEACAM6P40199 344 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 RND2P52198 227 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 CEBPGP53567 150 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 SOX8P57073 446 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 FAM3BP58499 235 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-249ENST00000564606 ERVK-16P61578 105 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 PPP1CBP62140 327 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 RAB11AP62491 216 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 SLC38A11Q08AI6 406 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 ZNF154Q13106 437 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 RAB31Q13636 194 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 TMEM249Q2WGJ8 235 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 SMIM21Q3B7S5 101 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 LBHQ53QV2 105 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-249ENST00000564606 NCR3LG1Q68D85 454 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 SPSB3Q6PJ21 355 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 PCSK4Q6UW60 755 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 TMEM251Q8N6I4 163 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 RDH5Q92781 318 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 TAF15Q92804 592 aaKnown RBP eCLIP6.49□□□□□ -1.37
ATXN3-249ENST00000564606 BCL2L2Q92843 193 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-249ENST00000564606 LHX4Q969G2 390 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 ACY3Q96HD9 319 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 ZNF845Q96IR2 970 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-249ENST00000564606 FAM210BQ96KR6 192 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 LURAP1Q96LR2 239 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 SCRT1Q9BWW7 348 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 MAP1LC3BQ9GZQ8 125 aa6.49□□□□□ -1.37
ATXN3-249ENST00000564606 WDR61Q9GZS3 305 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms