RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 OR4C46A6NHA9 309 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 LSM8O95777 96 aaKnown RBP8.05□□□□□ -1.12
CDH1-205ENST00000562836 MPIG6BO95866 241 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 PFN1P07737 140 aaKnown RBP8.05□□□□□ -1.12
CDH1-205ENST00000562836 PVRP15151 417 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 EPCAMP16422 314 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 FAUP35544 74 aaKnown RBP8.05□□□□□ -1.12
CDH1-205ENST00000562836 VDAC2P45880 294 aaPredicted RBP8.05□□□□□ -1.12
CDH1-205ENST00000562836 FUT6P51993 359 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 MYBPHQ13203 477 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 CD226Q15762 336 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 MSMO1Q15800 293 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 ACSF3Q4G176 576 aaPredicted RBP8.05□□□□□ -1.12
CDH1-205ENST00000562836 ZNF385BQ569K4 471 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 TECRLQ5HYJ1 363 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 OR52E2Q8NGJ4 325 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 OR10D3Q8NH80 312 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 PTPMT1Q8WUK0 201 aaPredicted RBP8.05□□□□□ -1.12
CDH1-205ENST00000562836 SMIM19Q96E16 107 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 C20orf78Q9BR46 151 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 PYGO2Q9BRQ0 406 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 SH2B3Q9UQQ2 575 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 SPCS1Q9Y6A9 102 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 PARP14Q460N5 1801 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 GON4LQ3T8J9 2241 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 LOC102723996A0A087X1L8 192 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 LGALS2P05162 132 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 CSRP3P50461 194 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 TAS2R20P59543 309 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 TUSC3Q13454 348 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 HEATR5AQ86XA9 2040 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 ZNF433Q8N7K0 673 aaPredicted RBP8.05□□□□□ -1.12
CDH1-205ENST00000562836 ZNF439Q8NDP4 499 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 MAFAQ8NHW3 353 aaPredicted RBP8.05□□□□□ -1.12
CDH1-205ENST00000562836 CST11Q9H112 138 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 PLEKHF2Q9H8W4 249 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 TECRQ9NZ01 308 aaKnown RBP8.05□□□□□ -1.12
CDH1-205ENST00000562836 TCF19Q9Y242 345 aa8.05□□□□□ -1.12
CDH1-205ENST00000562836 ZNF646O15015 1829 aaPredicted RBP8.04□□□□□ -1.12
CDH1-205ENST00000562836 UTRNP46939 3433 aa8.04□□□□□ -1.12
CDH1-205ENST00000562836 DOCK5Q9H7D0 1870 aa8.04□□□□□ -1.12
CDH1-205ENST00000562836 TRAV24A0A0B4J272 114 aa8.04□□□□□ -1.12
CDH1-205ENST00000562836 DHHO43323 396 aa8.04□□□□□ -1.12
CDH1-205ENST00000562836 FCGR2AP12318 317 aa8.04□□□□□ -1.12
CDH1-205ENST00000562836 NBL1P41271 181 aa8.04□□□□□ -1.12
CDH1-205ENST00000562836 XGP55808 180 aa8.04□□□□□ -1.12
CDH1-205ENST00000562836 RAB10P61026 200 aa8.04□□□□□ -1.12
CDH1-205ENST00000562836 RND3P61587 244 aa8.04□□□□□ -1.12
CDH1-205ENST00000562836 ZNF415Q09FC8 603 aa8.04□□□□□ -1.12
CDH1-205ENST00000562836 ZNF761Q86XN6 746 aaPredicted RBP8.04□□□□□ -1.12
CDH1-205ENST00000562836 TEX29Q8N6K0 151 aa8.04□□□□□ -1.12
CDH1-205ENST00000562836 OR10AG1Q8NH19 301 aa8.04□□□□□ -1.12
CDH1-205ENST00000562836 EDA2RQ9HAV5 297 aa8.04□□□□□ -1.12
CDH1-205ENST00000562836 SPANXB1Q9NS25 103 aaPredicted RBP8.04□□□□□ -1.12
CDH1-205ENST00000562836 ADAMTSL1Q8N6G6 1762 aa8.04□□□□□ -1.12
CDH1-205ENST00000562836 C9JAW5 83 aa8.04□□□□□ -1.12
CDH1-205ENST00000562836 MT-CO3P00414 261 aa8.04□□□□□ -1.12
CDH1-205ENST00000562836 CCL20P78556 96 aa8.04□□□□□ -1.12
CDH1-205ENST00000562836 TLE1Q04724 770 aa8.04□□□□□ -1.12
CDH1-205ENST00000562836 GTF3C1Q12789 2109 aa8.04□□□□□ -1.12
CDH1-205ENST00000562836 IL13RA2Q14627 380 aa8.04□□□□□ -1.12
CDH1-205ENST00000562836 ZNF678Q5SXM1 525 aa8.04□□□□□ -1.12
CDH1-205ENST00000562836 FAM159AQ6UWV7 190 aa8.04□□□□□ -1.12
CDH1-205ENST00000562836 Q6ZUT4 128 aa8.04□□□□□ -1.12
CDH1-205ENST00000562836 FAM214BQ7L5A3 538 aa8.04□□□□□ -1.12
CDH1-205ENST00000562836 Q8TCH9 128 aa8.04□□□□□ -1.12
CDH1-205ENST00000562836 RTN4IP1Q8WWV3 396 aaPredicted RBP8.04□□□□□ -1.12
CDH1-205ENST00000562836 NAT6Q93015 286 aa8.04□□□□□ -1.12
CDH1-205ENST00000562836 HPDLQ96IR7 371 aa8.04□□□□□ -1.12
CDH1-205ENST00000562836 SMDT1Q9H4I9 107 aa8.04□□□□□ -1.12
CDH1-205ENST00000562836 SYNPO2LQ9H987 977 aa8.04□□□□□ -1.12
CDH1-205ENST00000562836 HIGD1AQ9Y241 93 aa8.04□□□□□ -1.12
CDH1-205ENST00000562836 TRBV6-7A0A0A0MS04 114 aa8.03□□□□□ -1.12
CDH1-205ENST00000562836 LOC102725191A0A1B0GVB3 256 aa8.03□□□□□ -1.12
CDH1-205ENST00000562836 C9orf118A6NHY6 69 aa8.03□□□□□ -1.12
CDH1-205ENST00000562836 TBL1XO60907 577 aa8.03□□□□□ -1.12
CDH1-205ENST00000562836 HLA-AP01891 365 aaKnown RBP8.03□□□□□ -1.12
CDH1-205ENST00000562836 DANCRP0C864 163 aa8.03□□□□□ -1.12
CDH1-205ENST00000562836 LIMS3P0CW19 117 aa8.03□□□□□ -1.12
CDH1-205ENST00000562836 LIMS4P0CW20 117 aa8.03□□□□□ -1.12
CDH1-205ENST00000562836 PNPLA4P41247 253 aa8.03□□□□□ -1.12
CDH1-205ENST00000562836 SLC25A11Q02978 314 aaKnown RBP8.03□□□□□ -1.12
CDH1-205ENST00000562836 FAM174BQ3ZCQ3 159 aa8.03□□□□□ -1.12
CDH1-205ENST00000562836 C4orf48Q5BLP8 95 aa8.03□□□□□ -1.12
CDH1-205ENST00000562836 OR10J3Q5JRS4 329 aa8.03□□□□□ -1.12
CDH1-205ENST00000562836 DTWD2Q8NBA8 298 aa8.03□□□□□ -1.12
CDH1-205ENST00000562836 HSD17B10Q99714 261 aaKnown RBP8.03□□□□□ -1.12
CDH1-205ENST00000562836 CDIP1Q9H305 208 aa8.03□□□□□ -1.12
CDH1-205ENST00000562836 ST20Q9HBF5 79 aa8.03□□□□□ -1.12
CDH1-205ENST00000562836 DPRXA6NFQ7 191 aa8.03□□□□□ -1.12
CDH1-205ENST00000562836 PRSS29PA6NIE9 313 aa8.03□□□□□ -1.12
CDH1-205ENST00000562836 SERF1AO75920 110 aa8.03□□□□□ -1.12
CDH1-205ENST00000562836 MOSP00540 346 aa8.03□□□□□ -1.12
CDH1-205ENST00000562836 FCGR2BP31994 310 aaPredicted RBP8.03□□□□□ -1.12
CDH1-205ENST00000562836 ZNF93P35789 620 aaPredicted RBP8.03□□□□□ -1.12
CDH1-205ENST00000562836 APOBEC1P41238 236 aaKnown RBP8.03□□□□□ -1.12
CDH1-205ENST00000562836 NSG1P42857 185 aa8.03□□□□□ -1.12
CDH1-205ENST00000562836 GZMMP51124 257 aa8.03□□□□□ -1.12
CDH1-205ENST00000562836 INSL3P51460 131 aa8.03□□□□□ -1.12
CDH1-205ENST00000562836 C4orf26Q17RF5 130 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms