RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 ZNF485Q8NCK3 441 aa11.34□□□□□ -0.59
SPG7-205ENST00000561945 CCDC107Q8WV48 283 aa11.34□□□□□ -0.59
SPG7-205ENST00000561945 PGLYRP3Q96LB9 341 aa11.34□□□□□ -0.59
SPG7-205ENST00000561945 KCTD7Q96MP8 289 aa11.34□□□□□ -0.59
SPG7-205ENST00000561945 RDH12Q96NR8 316 aa11.34□□□□□ -0.59
SPG7-205ENST00000561945 MBNL3Q9NUK0 354 aaKnown RBP11.34□□□□□ -0.59
SPG7-205ENST00000561945 HYDINQ4G0P3 5121 aa11.34□□□□□ -0.59
SPG7-205ENST00000561945 MAGEA13PA6NCF6 341 aa11.33□□□□□ -0.6
SPG7-205ENST00000561945 SEC14L6B5MCN3 397 aa11.33□□□□□ -0.6
SPG7-205ENST00000561945 I3L521 148 aa11.33□□□□□ -0.6
SPG7-205ENST00000561945 SPINT2O43291 252 aa11.33□□□□□ -0.6
SPG7-205ENST00000561945 LSAMPQ13449 338 aa11.33□□□□□ -0.6
SPG7-205ENST00000561945 SMN1Q16637 294 aaKnown RBP11.33□□□□□ -0.6
SPG7-205ENST00000561945 Q499Y3 187 aa11.33□□□□□ -0.6
SPG7-205ENST00000561945 YIF1BQ5BJH7 314 aa11.33□□□□□ -0.6
SPG7-205ENST00000561945 C6orf183Q5T699 404 aa11.33□□□□□ -0.6
SPG7-205ENST00000561945 ASPHD1Q5U4P2 390 aa11.33□□□□□ -0.6
SPG7-205ENST00000561945 TMPRSS11AQ6ZMR5 421 aa11.33□□□□□ -0.6
SPG7-205ENST00000561945 ODF3L1Q8IXM7 274 aa11.33□□□□□ -0.6
SPG7-205ENST00000561945 STX19Q8N4C7 294 aa11.33□□□□□ -0.6
SPG7-205ENST00000561945 UBALD1Q8TB05 177 aa11.33□□□□□ -0.6
SPG7-205ENST00000561945 ORAI1Q96D31 301 aa11.33□□□□□ -0.6
SPG7-205ENST00000561945 PRR25Q96S07 402 aa11.33□□□□□ -0.6
SPG7-205ENST00000561945 DIMT1Q9UNQ2 313 aaKnown RBP11.33□□□□□ -0.6
SPG7-205ENST00000561945 TENM2Q9NT68 2774 aa11.33□□□□□ -0.6
SPG7-205ENST00000561945 TRAV8-7A0A075B6U6 113 aa11.32□□□□□ -0.6
SPG7-205ENST00000561945 TRBV5-7A0A0A0MS05 114 aa11.32□□□□□ -0.6
SPG7-205ENST00000561945 IRGMA1A4Y4 181 aa11.32□□□□□ -0.6
SPG7-205ENST00000561945 MCRIP1C9JLW8 97 aa11.32□□□□□ -0.6
SPG7-205ENST00000561945 C3orf84H3BNL1 204 aa11.32□□□□□ -0.6
SPG7-205ENST00000561945 HBZP02008 142 aa11.32□□□□□ -0.6
SPG7-205ENST00000561945 RAB25P57735 213 aa11.32□□□□□ -0.6
SPG7-205ENST00000561945 SLC22A6Q4U2R8 563 aa11.32□□□□□ -0.6
SPG7-205ENST00000561945 MORN2Q502X0 79 aa11.32□□□□□ -0.6
SPG7-205ENST00000561945 RAB12Q6IQ22 244 aa11.32□□□□□ -0.6
SPG7-205ENST00000561945 ZNF491Q8N8L2 437 aa11.32□□□□□ -0.6
SPG7-205ENST00000561945 OR11H1Q8NG94 326 aa11.32□□□□□ -0.6
SPG7-205ENST00000561945 OR13C5Q8NGS8 318 aa11.32□□□□□ -0.6
SPG7-205ENST00000561945 GHSRQ92847 366 aa11.32□□□□□ -0.6
SPG7-205ENST00000561945 C8orf4Q9NR00 106 aa11.32□□□□□ -0.6
SPG7-205ENST00000561945 ETAA1Q9NY74 926 aa11.32□□□□□ -0.6
SPG7-205ENST00000561945 ZNF107Q9UII5 783 aaPredicted RBP11.32□□□□□ -0.6
SPG7-205ENST00000561945 TRAPPC2LQ9UL33 140 aa11.32□□□□□ -0.6
SPG7-205ENST00000561945 ZNF256Q9Y2P7 627 aaPredicted RBP11.32□□□□□ -0.6
SPG7-205ENST00000561945 ANKRD65E5RJM6 399 aa11.31□□□□□ -0.6
SPG7-205ENST00000561945 HLA-DRB1P01911 266 aa11.31□□□□□ -0.6
SPG7-205ENST00000561945 RCC1P18754 421 aaPredicted RBP11.31□□□□□ -0.6
SPG7-205ENST00000561945 ECI1P42126 302 aa11.31□□□□□ -0.6
SPG7-205ENST00000561945 CRIP2P52943 208 aaPredicted RBP11.31□□□□□ -0.6
SPG7-205ENST00000561945 HTD2P86397 168 aa11.31□□□□□ -0.6
SPG7-205ENST00000561945 C19orf54Q5BKX5 351 aa11.31□□□□□ -0.6
SPG7-205ENST00000561945 SIGIRRQ6IA17 410 aa11.31□□□□□ -0.6
SPG7-205ENST00000561945 MINDY2Q8NBR6 621 aa11.31□□□□□ -0.6
SPG7-205ENST00000561945 NPBQ8NG41 125 aa11.31□□□□□ -0.6
SPG7-205ENST00000561945 OR1L1Q8NH94 360 aa11.31□□□□□ -0.6
SPG7-205ENST00000561945 NEK7Q8TDX7 302 aa11.31□□□□□ -0.6
SPG7-205ENST00000561945 CHCHD3Q9NX63 227 aaKnown RBP11.31□□□□□ -0.6
SPG7-205ENST00000561945 GNG12Q9UBI6 72 aa11.31□□□□□ -0.6
SPG7-205ENST00000561945 CKLFQ9UBR5 152 aa11.31□□□□□ -0.6
SPG7-205ENST00000561945 JPT1Q9UK76 154 aa11.31□□□□□ -0.6
SPG7-205ENST00000561945 MRPS28Q9Y2Q9 187 aaKnown RBP11.31□□□□□ -0.6
SPG7-205ENST00000561945 EXOSC1Q9Y3B2 195 aaKnown RBP11.31□□□□□ -0.6
SPG7-205ENST00000561945 NDUFA3O95167 84 aa11.3□□□□□ -0.6
SPG7-205ENST00000561945 CD1AP06126 327 aa11.3□□□□□ -0.6
SPG7-205ENST00000561945 OR8U8P0C7N1 319 aa11.3□□□□□ -0.6
SPG7-205ENST00000561945 ADARB1P78563 741 aaKnown RBP11.3□□□□□ -0.6
SPG7-205ENST00000561945 RCN1Q15293 331 aa11.3□□□□□ -0.6
SPG7-205ENST00000561945 ZNF260Q3ZCT1 412 aa11.3□□□□□ -0.6
SPG7-205ENST00000561945 C6orf141Q5SZD1 244 aa11.3□□□□□ -0.6
SPG7-205ENST00000561945 GLIPR1L1Q6UWM5 242 aa11.3□□□□□ -0.6
SPG7-205ENST00000561945 ZNF833PQ6ZTB9 187 aa11.3□□□□□ -0.6
SPG7-205ENST00000561945 ZNF555Q8NEP9 628 aa11.3□□□□□ -0.6
SPG7-205ENST00000561945 OR4K15Q8NH41 348 aa11.3□□□□□ -0.6
SPG7-205ENST00000561945 MUL1Q969V5 352 aa11.3□□□□□ -0.6
SPG7-205ENST00000561945 RBMXL1Q96E39 390 aaKnown RBP11.3□□□□□ -0.6
SPG7-205ENST00000561945 Q96M66 194 aa11.3□□□□□ -0.6
SPG7-205ENST00000561945 KLK15Q9H2R5 256 aa11.3□□□□□ -0.6
SPG7-205ENST00000561945 OR51J1Q9H342 316 aa11.3□□□□□ -0.6
SPG7-205ENST00000561945 GNB4Q9HAV0 340 aa11.3□□□□□ -0.6
SPG7-205ENST00000561945 TAF9BQ9HBM6 251 aa11.3□□□□□ -0.6
SPG7-205ENST00000561945 IGHV7-81A0A0B4J1V7 117 aa11.29□□□□□ -0.6
SPG7-205ENST00000561945 YPEL1O60688 119 aa11.29□□□□□ -0.6
SPG7-205ENST00000561945 MGMTP16455 207 aa11.29□□□□□ -0.6
SPG7-205ENST00000561945 FUT3P21217 361 aa11.29□□□□□ -0.6
SPG7-205ENST00000561945 ZNF616Q08AN1 781 aa11.29□□□□□ -0.6
SPG7-205ENST00000561945 MMDQ15546 238 aa11.29□□□□□ -0.6
SPG7-205ENST00000561945 PACRGLQ8N7B6 248 aa11.29□□□□□ -0.6
SPG7-205ENST00000561945 OR10V1Q8NGI7 309 aa11.29□□□□□ -0.6
SPG7-205ENST00000561945 OR1N2Q8NGR9 330 aa11.29□□□□□ -0.6
SPG7-205ENST00000561945 RITA1Q96K30 269 aa11.29□□□□□ -0.6
SPG7-205ENST00000561945 YPEL2Q96QA6 119 aa11.29□□□□□ -0.6
SPG7-205ENST00000561945 OR14A2Q96R54 314 aa11.29□□□□□ -0.6
SPG7-205ENST00000561945 NABP2Q9BQ15 211 aa11.29□□□□□ -0.6
SPG7-205ENST00000561945 ABHD14AQ9BUJ0 271 aa11.29□□□□□ -0.6
SPG7-205ENST00000561945 OR2S2Q9NQN1 319 aa11.29□□□□□ -0.6
SPG7-205ENST00000561945 SMPD3Q9NY59 655 aaPredicted RBP11.29□□□□□ -0.6
SPG7-205ENST00000561945 CLEC2DQ9UHP7 191 aa11.29□□□□□ -0.6
SPG7-205ENST00000561945 VSIG4Q9Y279 399 aa11.29□□□□□ -0.6
SPG7-205ENST00000561945 PEX16Q9Y5Y5 336 aa11.29□□□□□ -0.6
SPG7-205ENST00000561945 ERICH4A6NGS2 130 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms