RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 Q499Y3 187 aa3.26□□□□□ -1.89
SMG1-204ENST00000561940 TMEM69Q5SWH9 247 aa3.26□□□□□ -1.89
SMG1-204ENST00000561940 TPGS1Q6ZTW0 290 aa3.26□□□□□ -1.89
SMG1-204ENST00000561940 FA2HQ7L5A8 372 aa3.26□□□□□ -1.89
SMG1-204ENST00000561940 LINC00596Q86U02 117 aa3.26□□□□□ -1.89
SMG1-204ENST00000561940 LYPD1Q8N2G4 141 aa3.26□□□□□ -1.89
SMG1-204ENST00000561940 ZMYND19Q96E35 227 aaPredicted RBP3.26□□□□□ -1.89
SMG1-204ENST00000561940 ANGPTL4Q9BY76 406 aa3.26□□□□□ -1.89
SMG1-204ENST00000561940 LHX5Q9H2C1 402 aa3.26□□□□□ -1.89
SMG1-204ENST00000561940 DNAJC27Q9NZQ0 273 aa3.26□□□□□ -1.89
SMG1-204ENST00000561940 CFAP45Q9UL16 551 aa3.26□□□□□ -1.89
SMG1-204ENST00000561940 MYO15AQ9UKN7 3530 aa3.26□□□□□ -1.89
SMG1-204ENST00000561940 ZZEF1O43149 2961 aa3.26□□□□□ -1.89
SMG1-204ENST00000561940 MYO9AB2RTY4 2548 aa3.26□□□□□ -1.89
SMG1-204ENST00000561940 IGF2RP11717 2491 aa3.26□□□□□ -1.89
SMG1-204ENST00000561940 SHROOM3Q8TF72 1996 aa3.25□□□□□ -1.89
SMG1-204ENST00000561940 VGLL3A8MV65 326 aa3.25□□□□□ -1.89
SMG1-204ENST00000561940 FFAR1O14842 300 aa3.25□□□□□ -1.89
SMG1-204ENST00000561940 SNRPAP09012 282 aaKnown RBP3.25□□□□□ -1.89
SMG1-204ENST00000561940 RAB38P57729 211 aa3.25□□□□□ -1.89
SMG1-204ENST00000561940 STX3Q13277 289 aa3.25□□□□□ -1.89
SMG1-204ENST00000561940 CYP4Z1Q86W10 505 aa3.25□□□□□ -1.89
SMG1-204ENST00000561940 SPICQ8N5J4 248 aa3.25□□□□□ -1.89
SMG1-204ENST00000561940 PEBP4Q96S96 227 aa3.25□□□□□ -1.89
SMG1-204ENST00000561940 ZNF436Q9C0F3 470 aaPredicted RBP3.25□□□□□ -1.89
SMG1-204ENST00000561940 VSIRQ9H7M9 311 aa3.25□□□□□ -1.89
SMG1-204ENST00000561940 OR2S2Q9NQN1 319 aa3.25□□□□□ -1.89
SMG1-204ENST00000561940 MAT2BQ9NZL9 334 aa3.25□□□□□ -1.89
SMG1-204ENST00000561940 CREBBPQ92793 2442 aa3.25□□□□□ -1.89
SMG1-204ENST00000561940 MYO7AQ13402 2215 aa3.25□□□□□ -1.89
SMG1-204ENST00000561940 ASPMQ8IZT6 3477 aa3.24□□□□□ -1.89
SMG1-204ENST00000561940 GOLGA8QA0A0J9YX86 632 aa3.24□□□□□ -1.89
SMG1-204ENST00000561940 C9JQL5 133 aa3.24□□□□□ -1.89
SMG1-204ENST00000561940 CDIPTO14735 213 aa3.24□□□□□ -1.89
SMG1-204ENST00000561940 GYG2O15488 501 aa3.24□□□□□ -1.89
SMG1-204ENST00000561940 FSTL3O95633 263 aa3.24□□□□□ -1.89
SMG1-204ENST00000561940 PFN1P07737 140 aaKnown RBP3.24□□□□□ -1.89
SMG1-204ENST00000561940 HTR2BP41595 481 aa3.24□□□□□ -1.89
SMG1-204ENST00000561940 MAGEA3P43357 314 aa3.24□□□□□ -1.89
SMG1-204ENST00000561940 AHSA2Q719I0 299 aa3.24□□□□□ -1.89
SMG1-204ENST00000561940 TMEM144Q7Z5S9 345 aa3.24□□□□□ -1.89
SMG1-204ENST00000561940 GALNT10Q86SR1 603 aa3.24□□□□□ -1.89
SMG1-204ENST00000561940 C1orf64Q8NEQ6 169 aa3.24□□□□□ -1.89
SMG1-204ENST00000561940 ATP6V1G3Q96LB4 118 aa3.24□□□□□ -1.89
SMG1-204ENST00000561940 CATSPER2Q96P56 530 aa3.24□□□□□ -1.89
SMG1-204ENST00000561940 SHANK2-AS3Q9BTD1 123 aa3.24□□□□□ -1.89
SMG1-204ENST00000561940 THTPAQ9BU02 230 aa3.24□□□□□ -1.89
SMG1-204ENST00000561940 HMGXB4Q9UGU5 601 aa3.24□□□□□ -1.89
SMG1-204ENST00000561940 TAC3Q9UHF0 121 aa3.24□□□□□ -1.89
SMG1-204ENST00000561940 SPEGQ15772 3267 aa3.24□□□□□ -1.89
SMG1-204ENST00000561940 FRYQ5TBA9 3013 aa3.24□□□□□ -1.89
SMG1-204ENST00000561940 H3BP45 60 aa3.23□□□□□ -1.89
SMG1-204ENST00000561940 ISLRO14498 428 aa3.23□□□□□ -1.89
SMG1-204ENST00000561940 FADS2O95864 444 aaKnown RBP3.23□□□□□ -1.89
SMG1-204ENST00000561940 NPPAP01160 153 aa3.23□□□□□ -1.89
SMG1-204ENST00000561940 CSRP1P21291 193 aaKnown RBP3.23□□□□□ -1.89
SMG1-204ENST00000561940 IMPA1P29218 277 aa3.23□□□□□ -1.89
SMG1-204ENST00000561940 IL12BP29460 328 aa3.23□□□□□ -1.89
SMG1-204ENST00000561940 LGALS7P47929 136 aa3.23□□□□□ -1.89
SMG1-204ENST00000561940 RPS11P62280 158 aaKnown RBP eCLIP3.23□□□□□ -1.89
SMG1-204ENST00000561940 IGFBP7Q16270 282 aa3.23□□□□□ -1.89
SMG1-204ENST00000561940 ATP6AP1LQ52LC2 224 aa3.23□□□□□ -1.89
SMG1-204ENST00000561940 HBMQ6B0K9 141 aa3.23□□□□□ -1.89
SMG1-204ENST00000561940 CLEC18BQ6UXF7 455 aa3.23□□□□□ -1.89
SMG1-204ENST00000561940 ZNF680Q8NEM1 530 aa3.23□□□□□ -1.89
SMG1-204ENST00000561940 OR2Y1Q8NGV0 311 aa3.23□□□□□ -1.89
SMG1-204ENST00000561940 IFT81Q8WYA0 676 aa3.23□□□□□ -1.89
SMG1-204ENST00000561940 TREM1Q9NP99 234 aa3.23□□□□□ -1.89
SMG1-204ENST00000561940 PHIPQ8WWQ0 1821 aa3.23□□□□□ -1.89
SMG1-204ENST00000561940 C2CD3Q4AC94 2353 aa3.22□□□□□ -1.89
SMG1-204ENST00000561940 ERICH2A1L162 156 aa3.22□□□□□ -1.89
SMG1-204ENST00000561940 GOLGA8IPA6NC78 632 aa3.22□□□□□ -1.89
SMG1-204ENST00000561940 UPK2O00526 184 aa3.22□□□□□ -1.89
SMG1-204ENST00000561940 COX7A2P2O60397 106 aa3.22□□□□□ -1.89
SMG1-204ENST00000561940 KCNK2O95069 426 aa3.22□□□□□ -1.89
SMG1-204ENST00000561940 BRI3O95415 125 aa3.22□□□□□ -1.89
SMG1-204ENST00000561940 PRB1P04280 392 aa3.22□□□□□ -1.89
SMG1-204ENST00000561940 GCLMP48507 274 aa3.22□□□□□ -1.89
SMG1-204ENST00000561940 AQP5P55064 265 aa3.22□□□□□ -1.89
SMG1-204ENST00000561940 FMODQ06828 376 aa3.22□□□□□ -1.89
SMG1-204ENST00000561940 TRAM1Q15629 374 aa3.22□□□□□ -1.89
SMG1-204ENST00000561940 UBE2NLQ5JXB2 153 aa3.22□□□□□ -1.89
SMG1-204ENST00000561940 CLEC12AQ5QGZ9 265 aa3.22□□□□□ -1.89
SMG1-204ENST00000561940 ZNF773Q6PK81 442 aa3.22□□□□□ -1.89
SMG1-204ENST00000561940 OR4K17Q8NGC6 315 aa3.22□□□□□ -1.89
SMG1-204ENST00000561940 OR4C13Q8NGP0 309 aa3.22□□□□□ -1.89
SMG1-204ENST00000561940 OR6K3Q8NGY3 331 aa3.22□□□□□ -1.89
SMG1-204ENST00000561940 OR8S1Q8NH09 359 aa3.22□□□□□ -1.89
SMG1-204ENST00000561940 BIRC8Q96P09 236 aa3.22□□□□□ -1.89
SMG1-204ENST00000561940 LINC01587Q99440 93 aa3.22□□□□□ -1.89
SMG1-204ENST00000561940 OR52A5Q9H2C5 316 aa3.22□□□□□ -1.89
SMG1-204ENST00000561940 METTL8Q9H825 291 aaKnown RBP3.22□□□□□ -1.89
SMG1-204ENST00000561940 ZNF492Q9P255 531 aa3.22□□□□□ -1.89
SMG1-204ENST00000561940 SLC22A14Q9Y267 594 aa3.22□□□□□ -1.89
SMG1-204ENST00000561940 ZNF780BQ9Y6R6 833 aa3.22□□□□□ -1.89
SMG1-204ENST00000561940 LOC285556D6RIA3 1793 aa3.22□□□□□ -1.89
SMG1-204ENST00000561940 GBF1Q92538 1859 aa3.22□□□□□ -1.89
SMG1-204ENST00000561940 PIEZO2Q9H5I5 2752 aa3.22□□□□□ -1.89
SMG1-204ENST00000561940 IGSF10Q6WRI0 2623 aa3.22□□□□□ -1.89
SMG1-204ENST00000561940 YLPM1P49750 1951 aaKnown RBP3.21□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms