RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 SH3GL3Q99963 347 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 FAM192AQ9GZU8 254 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 TPK1Q9H3S4 243 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 BCL2L10Q9HD36 194 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 DAZ3Q9NR90 486 aaKnown RBP2.52□□□□□ -2.01
HERC1-215ENST00000561436 CCL28Q9NRJ3 127 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 TMEM106BQ9NUM4 274 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 NECAP2Q9NVZ3 263 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 PDP1Q9P0J1 537 aaPredicted RBP2.52□□□□□ -2.01
HERC1-215ENST00000561436 TMEM216Q9P0N5 145 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 TAAR3PQ9P1P4 343 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 STARD10Q9Y365 291 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 CAB39Q9Y376 341 aaPredicted RBP2.52□□□□□ -2.01
HERC1-215ENST00000561436 DNAJC15Q9Y5T4 150 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 KCNE3Q9Y6H6 103 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 ACANP16112 2415 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 GTF3C1Q12789 2109 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 TRAV36DV7A0A075B6V5 113 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 EXOC1LA0A1B0GW35 172 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 A6NDX4 124 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 PHYHO14832 338 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 PPP1R2P9O14990 202 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 PLIN3O60664 434 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 C6orf47O95873 294 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 HLA-HP01893 362 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 OR12D1P0DN82 309 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 COX5BP10606 129 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 GSTM3P21266 225 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 MDKP21741 143 aaPredicted RBP2.51□□□□□ -2.01
HERC1-215ENST00000561436 RRM2P31350 389 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 TFPI2P48307 235 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 ZNF133P52736 654 aaPredicted RBP2.51□□□□□ -2.01
HERC1-215ENST00000561436 CRISP3P54108 245 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 FOXA1P55317 472 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 PCBD1P61457 104 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 RPL38P63173 70 aaKnown RBP2.51□□□□□ -2.01
HERC1-215ENST00000561436 CCL8P80075 99 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 CASP8Q14790 479 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 RCN1Q15293 331 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 NDUFAF6Q330K2 333 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 CARD17Q5XLA6 110 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 CTRB2Q6GPI1 263 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 ULK3Q6PHR2 472 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 METAP1DQ6UB28 335 aaPredicted RBP2.51□□□□□ -2.01
HERC1-215ENST00000561436 C19orf35Q6ZS72 473 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 SLC25A48Q6ZT89 311 aaKnown RBP2.51□□□□□ -2.01
HERC1-215ENST00000561436 KRTAP11-1Q8IUC1 163 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 MKXQ8IYA7 352 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 ZCCHC24Q8N2G6 241 aaKnown RBP2.51□□□□□ -2.01
HERC1-215ENST00000561436 SLC22A24Q8N4F4 322 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 Q8N9W7 124 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 WFDC9Q8NEX5 89 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 OR4S1Q8NGB4 309 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 OR6N1Q8NGY5 312 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 TWIST2Q8WVJ9 160 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 GEMIN6Q8WXD5 167 aaKnown RBP2.51□□□□□ -2.01
HERC1-215ENST00000561436 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.51□□□□□ -2.01
HERC1-215ENST00000561436 CCL17Q92583 94 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 TMEM54Q969K7 222 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 SLC25A44Q96H78 314 aaPredicted RBP2.51□□□□□ -2.01
HERC1-215ENST00000561436 CCDC115Q96NT0 180 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 OSBPL10Q9BXB5 764 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 CDCA4Q9BXL8 241 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 GPR61Q9BZJ8 451 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 ULBP2Q9BZM5 246 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 SLC38A1Q9H2H9 487 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 OR51I1Q9H343 314 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 TMEM165Q9HC07 324 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 ABCB10Q9NRK6 738 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 DCAF16Q9NXF7 216 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 GLTPQ9NZD2 209 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 XCL2Q9UBD3 114 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 MARCOQ9UEW3 520 aaPredicted RBP2.51□□□□□ -2.01
HERC1-215ENST00000561436 NOP16Q9Y3C1 178 aaKnown RBP2.51□□□□□ -2.01
HERC1-215ENST00000561436 GMEB1Q9Y692 573 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 CACNG2Q9Y698 323 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 VPS13CQ709C8 3753 aa2.51□□□□□ -2.01
HERC1-215ENST00000561436 A0A087WUJ7 227 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 WI2-2373I1.2A0A1W2PRP0 233 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 PRORSD1PA6NEY8 169 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 LYNX1G3V0Z9 82 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 C3orf84H3BNL1 204 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 TRAPPC2LH3BP13 241 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 M0R3G1 203 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 HMGN4O00479 90 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 PEX7O00628 323 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 PLPP3O14495 311 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 RNF13O43567 381 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 ENSAO43768 121 aaKnown RBP2.5□□□□□ -2.01
HERC1-215ENST00000561436 ZNF861PO60384 105 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 CA11O75493 328 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 EIF3GO75821 320 aaKnown RBP eCLIP2.5□□□□□ -2.01
HERC1-215ENST00000561436 CST1P01037 141 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 IGHV1-46P01743 117 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 GAPDHP04406 335 aaKnown RBP2.5□□□□□ -2.01
HERC1-215ENST00000561436 IL6P05231 212 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 CRYGBP07316 175 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 LINC00032P0C843 101 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 LYNX1P0DP58 116 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 APLNRP35414 380 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms