RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 CAMK2DQ13557 499 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 HERPUD1Q15011 391 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 CDK10Q15131 360 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 ZMYND11Q15326 602 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 RBMY1FQ15415 496 aaKnown RBP2.61□□□□□ -1.99
SPG11-225ENST00000561391 KCNJ8Q15842 424 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 SGCAQ16586 387 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 DEFB112Q30KQ8 113 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 SLC36A2Q495M3 483 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 ACTBL2Q562R1 376 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 TIMM23BQ5SRD1 257 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 C1orf100Q5SVJ3 147 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 CLVS2Q5SYC1 327 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 GLYATL3Q5SZD4 288 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 FAM27D1Q5T7N8 215 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 HES5Q5TA89 166 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 HIST2H3PS2Q5TEC6 136 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 RAET1LQ5VY80 246 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 C11orf88Q6PI97 169 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 SLC25A47Q6Q0C1 308 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 DRAM2Q6UX65 266 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 FOXL2NBQ6ZUU3 175 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 HIST2H3AQ71DI3 136 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 UTS2BQ765I0 119 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 OR2W3Q7Z3T1 314 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 ABHD12BQ7Z5M8 362 aaPredicted RBP2.61□□□□□ -1.99
SPG11-225ENST00000561391 NR2C2APQ86WQ0 139 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 SNX29P2Q8IUI4 249 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 WDFY1Q8IWB7 410 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 CCDC36Q8IYA8 594 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 C20orf196Q8IYI0 205 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 KDM8Q8N371 416 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 GPR137CQ8N3F9 429 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 GBGT1Q8N5D6 347 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 TMEM229BQ8NBD8 167 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 POC1AQ8NBT0 407 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 OR1M1Q8NGA1 313 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 OR4S1Q8NGB4 309 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 OR9K2Q8NGE7 335 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 OR13A1Q8NGR1 328 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 OR2V1Q8NHB1 315 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 KCNG3Q8TAE7 436 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 THAP6Q8TBB0 222 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 LGALS14Q8TCE9 139 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 RGP1Q92546 391 aaPredicted RBP2.61□□□□□ -1.99
SPG11-225ENST00000561391 TMEM54Q969K7 222 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 YIPF5Q969M3 257 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 SPSB1Q96BD6 273 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 MRPS24Q96EL2 167 aaKnown RBP2.61□□□□□ -1.99
SPG11-225ENST00000561391 ZNF486Q96H40 463 aaPredicted RBP2.61□□□□□ -1.99
SPG11-225ENST00000561391 RCHY1Q96PM5 261 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 NEDD4LQ96PU5 975 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 S100A13Q99584 98 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 GFI1Q99684 422 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 CST11Q9H112 138 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 ATG5Q9H1Y0 275 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 MMP28Q9H239 520 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 OR51J1Q9H342 316 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 SLA2Q9H6Q3 261 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 ZNF665Q9H7R5 613 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 HRASLSQ9HDD0 168 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 GLRX2Q9NS18 164 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 FAM206AQ9NX38 181 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 B3GAT1Q9P2W7 334 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 OR5V1Q9UGF6 321 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 ATPIF1Q9UII2 106 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 SCP2D1Q9UJQ7 156 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 KLHDC2Q9Y2U9 406 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 TIMM10BQ9Y5J6 103 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 FLVCR1Q9Y5Y0 555 aa2.61□□□□□ -1.99
SPG11-225ENST00000561391 TRAV8-7A0A075B6U6 113 aa2.6□□□□□ -1.99
SPG11-225ENST00000561391 TRAV18A0A075B6X5 111 aa2.6□□□□□ -1.99
SPG11-225ENST00000561391 IGKV3D-15A0A087WSY6 115 aa2.6□□□□□ -1.99
SPG11-225ENST00000561391 A0A1B0GW55 424 aa2.6□□□□□ -1.99
SPG11-225ENST00000561391 LOC107986453A0A1B0GWG9 222 aa2.6□□□□□ -1.99
SPG11-225ENST00000561391 OR2M5A3KFT3 312 aa2.6□□□□□ -1.99
SPG11-225ENST00000561391 SMIM30A4D0T7 59 aa2.6□□□□□ -1.99
SPG11-225ENST00000561391 OR6C6A6NF89 314 aa2.6□□□□□ -1.99
SPG11-225ENST00000561391 ZNF724A8MTY0 619 aa2.6□□□□□ -1.99
SPG11-225ENST00000561391 SERPINE3A8MV23 424 aa2.6□□□□□ -1.99
SPG11-225ENST00000561391 ZNF736B4DX44 427 aaPredicted RBP2.6□□□□□ -1.99
SPG11-225ENST00000561391 DISC1C4P0D8 188 aa2.6□□□□□ -1.99
SPG11-225ENST00000561391 SSNA1O43805 119 aa2.6□□□□□ -1.99
SPG11-225ENST00000561391 CREBL2O60519 120 aaPredicted RBP2.6□□□□□ -1.99
SPG11-225ENST00000561391 CYTIPO60759 359 aa2.6□□□□□ -1.99
SPG11-225ENST00000561391 CA11O75493 328 aa2.6□□□□□ -1.99
SPG11-225ENST00000561391 SRSF10O75494 262 aaKnown RBP2.6□□□□□ -1.99
SPG11-225ENST00000561391 NDUFB6O95139 128 aa2.6□□□□□ -1.99
SPG11-225ENST00000561391 IFNA6P05013 189 aa2.6□□□□□ -1.99
SPG11-225ENST00000561391 SERPINA5P05154 406 aa2.6□□□□□ -1.99
SPG11-225ENST00000561391 CD3GP09693 182 aa2.6□□□□□ -1.99
SPG11-225ENST00000561391 OR4A8P0C604 315 aa2.6□□□□□ -1.99
SPG11-225ENST00000561391 ACSM4P0C7M7 580 aa2.6□□□□□ -1.99
SPG11-225ENST00000561391 FAM106CPP0CH98 169 aa2.6□□□□□ -1.99
SPG11-225ENST00000561391 DUX4L2P0CJ85 424 aa2.6□□□□□ -1.99
SPG11-225ENST00000561391 DUX4L3P0CJ86 424 aa2.6□□□□□ -1.99
SPG11-225ENST00000561391 DUX4L5P0CJ88 424 aa2.6□□□□□ -1.99
SPG11-225ENST00000561391 DUX4L6P0CJ89 424 aa2.6□□□□□ -1.99
SPG11-225ENST00000561391 DUX4L7P0CJ90 424 aa2.6□□□□□ -1.99
SPG11-225ENST00000561391 IGHV4-38-2P0DP08 117 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms