RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 A0A1W2PPE2 198 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 A0A1W2PR64 198 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 A0A1W2PRV1 198 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 C15orf65H3BRN8 121 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 NDUFS8O00217 210 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 F2RL2O00254 374 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 NDUFS7O75251 213 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 DUX4L2P0CJ85 424 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 DUX4L3P0CJ86 424 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 DUX4L4P0CJ87 422 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 DUX4L5P0CJ88 424 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 DUX4L6P0CJ89 424 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 DUX4L7P0CJ90 424 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 TRAPPC2P0DI81 140 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 TRAPPC2BP0DI82 140 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 VSIG10L2P0DP72 767 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 SSTR5P35346 364 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 ATP5J2P56134 94 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 DSCR9P59020 149 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 RRAS2P62070 204 aaPredicted RBP8.53□□□□□ -1.04
USP3-219ENST00000561326 GNB2P62879 340 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 BAMBIQ13145 260 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 ZNF626Q68DY1 528 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 TMEM200BQ69YZ2 307 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 ZNF787Q6DD87 383 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 DUX4L9Q6RFH8 374 aaPredicted RBP8.53□□□□□ -1.04
USP3-219ENST00000561326 C5orf24Q7Z6I8 188 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 LYG2Q86SG7 212 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 OR10V1Q8NGI7 309 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 OR52M1Q8NGK5 317 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 UBALD1Q8TB05 177 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 ZNF431Q8TF32 576 aaPredicted RBP8.53□□□□□ -1.04
USP3-219ENST00000561326 PPP1R14BQ96C90 147 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 ZNF714Q96N38 554 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 PSMG3-AS1Q96PY0 264 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 RTBDNQ9BSG5 229 aaPredicted RBP8.53□□□□□ -1.04
USP3-219ENST00000561326 RSRP1Q9BUV0 290 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 TOLLIPQ9H0E2 274 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 LIME1Q9H400 295 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 C5orf66Q9H5L9 145 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 LINC00574Q9H8X3 128 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 IDI2-AS1Q9NZ38 188 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 OR1A1Q9P1Q5 309 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 GNG12Q9UBI6 72 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 DUX4Q9UBX2 424 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 JPT1Q9UK76 154 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 ARHGAP32A7KAX9 2087 aa8.53□□□□□ -1.04
USP3-219ENST00000561326 PIGBOS1A0A0B4J2F0 54 aa8.52□□□□□ -1.05
USP3-219ENST00000561326 GPR31O00270 319 aa8.52□□□□□ -1.05
USP3-219ENST00000561326 YPEL1O60688 119 aa8.52□□□□□ -1.05
USP3-219ENST00000561326 IGHV4-39P01824 125 aa8.52□□□□□ -1.05
USP3-219ENST00000561326 HLA-AP01891 365 aaKnown RBP8.52□□□□□ -1.05
USP3-219ENST00000561326 ANXA3P12429 323 aa8.52□□□□□ -1.05
USP3-219ENST00000561326 PAX1P15863 534 aa8.52□□□□□ -1.05
USP3-219ENST00000561326 PI3P19957 117 aa8.52□□□□□ -1.05
USP3-219ENST00000561326 VAMP1P23763 118 aa8.52□□□□□ -1.05
USP3-219ENST00000561326 COL8A1P27658 744 aa8.52□□□□□ -1.05
USP3-219ENST00000561326 PIGPP57054 158 aa8.52□□□□□ -1.05
USP3-219ENST00000561326 DHODHQ02127 395 aa8.52□□□□□ -1.05
USP3-219ENST00000561326 MORN2Q502X0 79 aa8.52□□□□□ -1.05
USP3-219ENST00000561326 ESCO2Q56NI9 601 aa8.52□□□□□ -1.05
USP3-219ENST00000561326 LY6G6FQ5SQ64 297 aa8.52□□□□□ -1.05
USP3-219ENST00000561326 WDR25Q64LD2 544 aaPredicted RBP8.52□□□□□ -1.05
USP3-219ENST00000561326 CLEC2AQ6UVW9 174 aa8.52□□□□□ -1.05
USP3-219ENST00000561326 C12orf45Q8N5I9 185 aaPredicted RBP8.52□□□□□ -1.05
USP3-219ENST00000561326 UXS1Q8NBZ7 420 aa8.52□□□□□ -1.05
USP3-219ENST00000561326 ZBTB34Q8NCN2 500 aa8.52□□□□□ -1.05
USP3-219ENST00000561326 ADAD2Q8NCV1 583 aaKnown RBP8.52□□□□□ -1.05
USP3-219ENST00000561326 OR52L2PQ8NGH6 319 aa8.52□□□□□ -1.05
USP3-219ENST00000561326 FAM168AQ92567 244 aa8.52□□□□□ -1.05
USP3-219ENST00000561326 MARVELD3Q96A59 401 aa8.52□□□□□ -1.05
USP3-219ENST00000561326 AKR1E2Q96JD6 320 aa8.52□□□□□ -1.05
USP3-219ENST00000561326 YPEL2Q96QA6 119 aa8.52□□□□□ -1.05
USP3-219ENST00000561326 PHB2Q99623 299 aa8.52□□□□□ -1.05
USP3-219ENST00000561326 SEC22CQ9BRL7 303 aa8.52□□□□□ -1.05
USP3-219ENST00000561326 PIMREGQ9BSJ6 248 aa8.52□□□□□ -1.05
USP3-219ENST00000561326 C19orf12Q9NSK7 152 aa8.52□□□□□ -1.05
USP3-219ENST00000561326 CTSZQ9UBR2 303 aa8.52□□□□□ -1.05
USP3-219ENST00000561326 C9orf170A2RU37 121 aa8.51□□□□□ -1.05
USP3-219ENST00000561326 ITGB1BP1O14713 200 aa8.51□□□□□ -1.05
USP3-219ENST00000561326 B3GALNT1O75752 331 aa8.51□□□□□ -1.05
USP3-219ENST00000561326 CCNKO75909 580 aa8.51□□□□□ -1.05
USP3-219ENST00000561326 DUS4LO95620 317 aaKnown RBP8.51□□□□□ -1.05
USP3-219ENST00000561326 IFNA2P01563 188 aa8.51□□□□□ -1.05
USP3-219ENST00000561326 OR8U9P0C7N5 309 aa8.51□□□□□ -1.05
USP3-219ENST00000561326 NFYBP25208 207 aa8.51□□□□□ -1.05
USP3-219ENST00000561326 GNRHRP30968 328 aa8.51□□□□□ -1.05
USP3-219ENST00000561326 PPP1CCP36873 323 aaKnown RBP8.51□□□□□ -1.05
USP3-219ENST00000561326 RAB7AP51149 207 aa8.51□□□□□ -1.05
USP3-219ENST00000561326 RND3P61587 244 aa8.51□□□□□ -1.05
USP3-219ENST00000561326 DHRS2Q13268 280 aa8.51□□□□□ -1.05
USP3-219ENST00000561326 MSMO1Q15800 293 aa8.51□□□□□ -1.05
USP3-219ENST00000561326 LTC4SQ16873 150 aa8.51□□□□□ -1.05
USP3-219ENST00000561326 C17orf58Q2M2W7 97 aa8.51□□□□□ -1.05
USP3-219ENST00000561326 LIN54Q6MZP7 749 aa8.51□□□□□ -1.05
USP3-219ENST00000561326 HEPN1Q6WQI6 88 aa8.51□□□□□ -1.05
USP3-219ENST00000561326 ZNF841Q6ZN19 808 aa8.51□□□□□ -1.05
USP3-219ENST00000561326 KCTD9Q7L273 389 aa8.51□□□□□ -1.05
USP3-219ENST00000561326 AKAP14Q86UN6 197 aa8.51□□□□□ -1.05
USP3-219ENST00000561326 ZNF525Q8N782 197 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms