RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 PI3P19957 117 aa9.32□□□□□ -0.92
SNX1-212ENST00000560861 GNRHRP30968 328 aa9.32□□□□□ -0.92
SNX1-212ENST00000560861 FXYD4P59646 89 aa9.32□□□□□ -0.92
SNX1-212ENST00000560861 HERV-K104P61576 105 aa9.32□□□□□ -0.92
SNX1-212ENST00000560861 RND3P61587 244 aa9.32□□□□□ -0.92
SNX1-212ENST00000560861 ZNF273Q14593 569 aa9.32□□□□□ -0.92
SNX1-212ENST00000560861 TMEM128Q5BJH2 165 aa9.32□□□□□ -0.92
SNX1-212ENST00000560861 LRRC10Q5BKY1 277 aa9.32□□□□□ -0.92
SNX1-212ENST00000560861 LY6G6FQ5SQ64 297 aa9.32□□□□□ -0.92
SNX1-212ENST00000560861 SLC38A6Q8IZM9 456 aa9.32□□□□□ -0.92
SNX1-212ENST00000560861 OR11H7Q8NGC8 314 aa9.32□□□□□ -0.92
SNX1-212ENST00000560861 OR10J5Q8NHC4 309 aa9.32□□□□□ -0.92
SNX1-212ENST00000560861 ZFAND1Q8TCF1 268 aa9.32□□□□□ -0.92
SNX1-212ENST00000560861 IL1F10Q8WWZ1 152 aa9.32□□□□□ -0.92
SNX1-212ENST00000560861 GALMQ96C23 342 aa9.32□□□□□ -0.92
SNX1-212ENST00000560861 ZNF486Q96H40 463 aaPredicted RBP9.32□□□□□ -0.92
SNX1-212ENST00000560861 ST6GAL2Q96JF0 529 aa9.32□□□□□ -0.92
SNX1-212ENST00000560861 GPN1Q9HCN4 374 aaPredicted RBP9.32□□□□□ -0.92
SNX1-212ENST00000560861 RDH8Q9NYR8 311 aa9.32□□□□□ -0.92
SNX1-212ENST00000560861 TAS2R3Q9NYW6 316 aa9.32□□□□□ -0.92
SNX1-212ENST00000560861 CLN8Q9UBY8 286 aa9.32□□□□□ -0.92
SNX1-212ENST00000560861 ZNF69Q9UC07 566 aa9.32□□□□□ -0.92
SNX1-212ENST00000560861 UBE2J1Q9Y385 318 aaPredicted RBP9.32□□□□□ -0.92
SNX1-212ENST00000560861 LINC00312Q9Y6C7 94 aa9.32□□□□□ -0.92
SNX1-212ENST00000560861 ANKRD17O75179 2603 aaKnown RBP9.32□□□□□ -0.92
SNX1-212ENST00000560861 TRGV10A0A0A0MS01 117 aa9.31□□□□□ -0.92
SNX1-212ENST00000560861 A0A0B4J2A0 478 aa9.31□□□□□ -0.92
SNX1-212ENST00000560861 hADV38S2A0JD32 116 aa9.31□□□□□ -0.92
SNX1-212ENST00000560861 FAM172BPA6NC97 362 aa9.31□□□□□ -0.92
SNX1-212ENST00000560861 CRYM-AS1A6NIL9 109 aa9.31□□□□□ -0.92
SNX1-212ENST00000560861 SPINT2O43291 252 aa9.31□□□□□ -0.92
SNX1-212ENST00000560861 PPIHO43447 177 aaKnown RBP9.31□□□□□ -0.92
SNX1-212ENST00000560861 CREBL2O60519 120 aaPredicted RBP9.31□□□□□ -0.92
SNX1-212ENST00000560861 SFT2D2O95562 160 aa9.31□□□□□ -0.92
SNX1-212ENST00000560861 IGLV2-14P01704 120 aa9.31□□□□□ -0.92
SNX1-212ENST00000560861 NDUFB7P17568 137 aa9.31□□□□□ -0.92
SNX1-212ENST00000560861 COL8A1P27658 744 aa9.31□□□□□ -0.92
SNX1-212ENST00000560861 IL2RGP31785 369 aa9.31□□□□□ -0.92
SNX1-212ENST00000560861 CBX3Q13185 183 aa9.31□□□□□ -0.92
SNX1-212ENST00000560861 C2orf68Q2NKX9 166 aa9.31□□□□□ -0.92
SNX1-212ENST00000560861 TMEM30BQ3MIR4 351 aa9.31□□□□□ -0.92
SNX1-212ENST00000560861 UTF1Q5T230 341 aa9.31□□□□□ -0.92
SNX1-212ENST00000560861 TMEM200BQ69YZ2 307 aa9.31□□□□□ -0.92
SNX1-212ENST00000560861 ZNF565Q8N9K5 539 aa9.31□□□□□ -0.92
SNX1-212ENST00000560861 RFESDQ8TAC1 157 aa9.31□□□□□ -0.92
SNX1-212ENST00000560861 C8orf46Q8TAG6 207 aa9.31□□□□□ -0.92
SNX1-212ENST00000560861 TOMM40LQ969M1 308 aa9.31□□□□□ -0.92
SNX1-212ENST00000560861 NEIL1Q96FI4 390 aaPredicted RBP9.31□□□□□ -0.92
SNX1-212ENST00000560861 C5orf30Q96GV9 206 aa9.31□□□□□ -0.92
SNX1-212ENST00000560861 TIMD4Q96H15 378 aa9.31□□□□□ -0.92
SNX1-212ENST00000560861 CCL19Q99731 98 aa9.31□□□□□ -0.92
SNX1-212ENST00000560861 PATZ1Q9HBE1 687 aaKnown RBP9.31□□□□□ -0.92
SNX1-212ENST00000560861 CCL28Q9NRJ3 127 aa9.31□□□□□ -0.92
SNX1-212ENST00000560861 LPAR3Q9UBY5 353 aa9.31□□□□□ -0.92
SNX1-212ENST00000560861 MIOXQ9UGB7 285 aa9.31□□□□□ -0.92
SNX1-212ENST00000560861 SHPKQ9UHJ6 478 aa9.31□□□□□ -0.92
SNX1-212ENST00000560861 JPT1Q9UK76 154 aa9.31□□□□□ -0.92
SNX1-212ENST00000560861 FBN2P35556 2912 aa9.31□□□□□ -0.92
SNX1-212ENST00000560861 YLPM1P49750 1951 aaKnown RBP9.3□□□□□ -0.92
SNX1-212ENST00000560861 CELSR2Q9HCU4 2923 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 MED13LQ71F56 2210 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 TRBV23-1A0A0A0MS06 115 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 DBX1A6NMT0 343 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 ITGB1BP1O14713 200 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 YPEL1O60688 119 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 PFDN1O60925 122 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 MMP23AO75900 390 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 DUS4LO95620 317 aaKnown RBP9.3□□□□□ -0.92
SNX1-212ENST00000560861 AKR1C4P17516 323 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 CXCL3P19876 107 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 PPP1CCP36873 323 aaKnown RBP9.3□□□□□ -0.92
SNX1-212ENST00000560861 CEACAM6P40199 344 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 GPR6P46095 362 aaPredicted RBP9.3□□□□□ -0.92
SNX1-212ENST00000560861 EIF4EBP1Q13541 118 aaPredicted RBP9.3□□□□□ -0.92
SNX1-212ENST00000560861 MSMO1Q15800 293 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 C4orf46Q504U0 113 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 WDR25Q64LD2 544 aaPredicted RBP9.3□□□□□ -0.92
SNX1-212ENST00000560861 HIST2H2BCQ6DN03 193 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 LPCAT3Q6P1A2 487 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 ZNF818PQ6ZRF7 136 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 AKAP14Q86UN6 197 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 PRR18Q8N4B5 295 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 C12orf45Q8N5I9 185 aaPredicted RBP9.3□□□□□ -0.92
SNX1-212ENST00000560861 SPICQ8N5J4 248 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 C11orf42Q8N5U0 333 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 ZNF525Q8N782 197 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 ZNF439Q8NDP4 499 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 BVESQ8NE79 360 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 OR10A7Q8NGE5 316 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 OR10V1Q8NGI7 309 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 OR52M1Q8NGK5 317 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 FAM216AQ8WUB2 273 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 MITD1Q8WV92 249 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 PPP1R14BQ96C90 147 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 GALNT14Q96FL9 552 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 YPEL2Q96QA6 119 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 AGMATQ9BSE5 352 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 SLC5A7Q9GZV3 580 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 MED28Q9H204 178 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 SLC2A9Q9NRM0 540 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms