RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 CCDC127Q96BQ5 260 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 TAMM41Q96BW9 452 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 GALMQ96C23 342 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 CYTH2Q99418 400 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 UPK3BQ9BT76 320 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 MED10Q9BTT4 135 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 ZNF471Q9BX82 626 aaPredicted RBP0.3□□□□□ -2.36
SPG11-222ENST00000560435 ULBP1Q9BZM6 244 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 CHST5Q9GZS9 411 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 AICDAQ9GZX7 198 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 GTSF1LQ9H1H1 148 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 OR51B6Q9H340 312 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 SMDT1Q9H4I9 107 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 C11orf1Q9H5F2 150 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 C16orf95Q9H693 158 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 TREM1Q9NP99 234 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 ASCL3Q9NQ33 180 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 KCNIP2Q9NS61 270 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 NRBP2Q9NSY0 501 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 DMAC2Q9NW81 257 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 MRPL16Q9NX20 251 aaKnown RBP0.3□□□□□ -2.36
SPG11-222ENST00000560435 MS4A12Q9NXJ0 267 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 TAS2R13Q9NYV9 303 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 CHMP5Q9NZZ3 219 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 COMMD9Q9P000 198 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 TMEM216Q9P0N5 145 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 CD300AQ9UGN4 299 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 LINC00527Q9UJ94 153 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 BTRCQ9Y297 605 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 ZNF337Q9Y3M9 751 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 HEY1Q9Y5J3 304 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 CEP170Q5SW79 1584 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 CLUHO75153 1309 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 MAP3K19Q56UN5 1328 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 RAD50Q92878 1312 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 PLCH2O75038 1416 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 CRB1P82279 1406 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 ADAMTSL1Q8N6G6 1762 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 IGHV3-15A0A0B4J1V0 119 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 IGHV3-73A0A0B4J1V6 119 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 TRGV4A0A0C4DH28 118 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 DHRS12A0PJE2 317 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 IGSF23A1L1A6 192 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 ARGFXA6NJG6 315 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 EFCAB9A8MZ26 197 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 C9J4A7 227 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 F5H5T6 163 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 SULT1C2O00338 296 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 TP53I11O14683 189 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 LIN7AO14910 233 aaPredicted RBP0.29□□□□□ -2.36
SPG11-222ENST00000560435 TOX3O15405 576 aaPredicted RBP0.29□□□□□ -2.36
SPG11-222ENST00000560435 EEF1E1O43324 174 aaKnown RBP0.29□□□□□ -2.36
SPG11-222ENST00000560435 ZNF189O75820 626 aaPredicted RBP0.29□□□□□ -2.36
SPG11-222ENST00000560435 S1PR2O95136 353 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 TNFAIP8O95379 198 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 SNAP29O95721 258 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 RAB36O95755 333 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 NPPAP01160 153 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 FBP1P09467 338 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 ZNF7P17097 686 aaPredicted RBP0.29□□□□□ -2.36
SPG11-222ENST00000560435 CSRP1P21291 193 aaKnown RBP0.29□□□□□ -2.36
SPG11-222ENST00000560435 CDK2P24941 298 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 PSMB6P28072 239 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 S100A2P29034 98 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 CRABP1P29762 137 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 AGTR1P30556 359 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 OPRM1P35372 400 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 ACTR1BP42025 376 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 OR1E2P47887 323 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 RPL14P50914 215 aaKnown RBP0.29□□□□□ -2.36
SPG11-222ENST00000560435 PSMD7P51665 324 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 AKR1C2P52895 323 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 RAB25P57735 213 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 LINC00313P59037 77 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 TSPEAR-AS2P59090 65 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 DAD1P61803 113 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 ZNF117Q03924 483 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 BSPH1Q075Z2 132 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 PMS2P3Q13401 168 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 HTR4Q13639 388 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 APOFQ13790 326 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 SS18Q15532 418 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 C4orf26Q17RF5 130 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 CLEC12BQ2HXU8 276 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 FAM229BQ4G0N7 80 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 MRPL51Q4U2R6 128 aaKnown RBP0.29□□□□□ -2.36
SPG11-222ENST00000560435 TRMT12Q53H54 448 aaKnown RBP0.29□□□□□ -2.36
SPG11-222ENST00000560435 XKRXQ6PP77 449 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 ZNF322Q6U7Q0 402 aaPredicted RBP0.29□□□□□ -2.36
SPG11-222ENST00000560435 SPATA24Q86W54 205 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 DOLPP1Q86YN1 238 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 PLCZ1Q86YW0 608 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 SELENOHQ8IZQ5 122 aaKnown RBP0.29□□□□□ -2.36
SPG11-222ENST00000560435 BLIDQ8IZY5 108 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 SYCE1Q8N0S2 351 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 ZNF567Q8N184 647 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 TCAIMQ8N3R3 496 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 DNAAF3Q8N9W5 541 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 TMEM75Q8N9X5 138 aa0.29□□□□□ -2.36
SPG11-222ENST00000560435 LFNGQ8NES3 379 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms