RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 TESK1Q15569 626 aa12.2□□□□□ -0.46
RABGGTA-212ENST00000559974 HMGN3Q15651 99 aa12.2□□□□□ -0.46
RABGGTA-212ENST00000559974 ZNF718Q3SXZ3 478 aa12.2□□□□□ -0.46
RABGGTA-212ENST00000559974 BEND4Q6ZU67 534 aa12.2□□□□□ -0.46
RABGGTA-212ENST00000559974 PRR18Q8N4B5 295 aa12.2□□□□□ -0.46
RABGGTA-212ENST00000559974 OR2C3Q8N628 320 aa12.2□□□□□ -0.46
RABGGTA-212ENST00000559974 GINS3Q9BRX5 216 aa12.2□□□□□ -0.46
RABGGTA-212ENST00000559974 OR14J1Q9UGF5 321 aa12.2□□□□□ -0.46
RABGGTA-212ENST00000559974 RP1L1Q8IWN7 2480 aaPredicted RBP12.2□□□□□ -0.46
RABGGTA-212ENST00000559974 ZGRF1Q86YA3 2104 aa12.2□□□□□ -0.46
RABGGTA-212ENST00000559974 OR5H1A6NKK0 313 aa12.19□□□□□ -0.46
RABGGTA-212ENST00000559974 HSPA12AO43301 675 aa12.19□□□□□ -0.46
RABGGTA-212ENST00000559974 ATG12O94817 140 aa12.19□□□□□ -0.46
RABGGTA-212ENST00000559974 PRB1P04280 392 aa12.19□□□□□ -0.46
RABGGTA-212ENST00000559974 SEC11BP0C7V7 166 aa12.19□□□□□ -0.46
RABGGTA-212ENST00000559974 SRSF3P84103 164 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-212ENST00000559974 ZNF826PQ6ZT77 177 aa12.19□□□□□ -0.46
RABGGTA-212ENST00000559974 C1orf174Q8IYL3 243 aa12.19□□□□□ -0.46
RABGGTA-212ENST00000559974 FAM169BQ8N8A8 192 aa12.19□□□□□ -0.46
RABGGTA-212ENST00000559974 AKR1E2Q96JD6 320 aa12.19□□□□□ -0.46
RABGGTA-212ENST00000559974 TLNRD1Q9H1K6 362 aa12.19□□□□□ -0.46
RABGGTA-212ENST00000559974 FAM212BQ9NTI7 297 aaPredicted RBP12.19□□□□□ -0.46
RABGGTA-212ENST00000559974 SSSCA1O60232 199 aa12.19□□□□□ -0.46
RABGGTA-212ENST00000559974 IGLV2-14P01704 120 aa12.19□□□□□ -0.46
RABGGTA-212ENST00000559974 ADCYAP1P18509 176 aa12.19□□□□□ -0.46
RABGGTA-212ENST00000559974 LMO1P25800 156 aa12.19□□□□□ -0.46
RABGGTA-212ENST00000559974 GCH1P30793 250 aa12.19□□□□□ -0.46
RABGGTA-212ENST00000559974 CEBPDP49716 269 aaPredicted RBP12.19□□□□□ -0.46
RABGGTA-212ENST00000559974 FABP6P51161 128 aa12.19□□□□□ -0.46
RABGGTA-212ENST00000559974 CAV2P51636 162 aa12.19□□□□□ -0.46
RABGGTA-212ENST00000559974 ARHGDIBP52566 201 aa12.19□□□□□ -0.46
RABGGTA-212ENST00000559974 TAGLNQ01995 201 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-212ENST00000559974 SWI5Q1ZZU3 235 aa12.19□□□□□ -0.46
RABGGTA-212ENST00000559974 CXorf66Q5JRM2 361 aaPredicted RBP12.19□□□□□ -0.46
RABGGTA-212ENST00000559974 MBNL2Q5VZF2 373 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-212ENST00000559974 BTNL8Q6UX41 500 aa12.19□□□□□ -0.46
RABGGTA-212ENST00000559974 Q6ZR03 302 aa12.19□□□□□ -0.46
RABGGTA-212ENST00000559974 Q6ZRG5 221 aa12.19□□□□□ -0.46
RABGGTA-212ENST00000559974 OR51H1Q8NH63 302 aa12.19□□□□□ -0.46
RABGGTA-212ENST00000559974 LYRM2Q9NU23 88 aaPredicted RBP12.19□□□□□ -0.46
RABGGTA-212ENST00000559974 FZR1Q9UM11 496 aa12.19□□□□□ -0.46
RABGGTA-212ENST00000559974 TMEM30CPA0ZSE6 113 aa12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 FAM24AA6NFZ4 105 aa12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 A6NLC8 198 aa12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 WNT9BO14905 357 aa12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 PSPNO60542 156 aa12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 SERPINE2P07093 398 aa12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 SPP1P10451 314 aa12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 F2RL1P55085 397 aa12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 VAMP2P63027 116 aa12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 ID3Q02535 119 aa12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 ZNF273Q14593 569 aa12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 PRAMEF6Q5VXH4 476 aa12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 TSNAXQ99598 290 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 NKX6-2Q9C056 277 aaPredicted RBP12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 TREM1Q9NP99 234 aa12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 SLC25A15Q9Y619 301 aa12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 LOC105371267A0A1B0GV96 52 aa12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 TSPAN4O14817 238 aa12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 HEXAP06865 529 aa12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 PSG2P11465 335 aa12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 MMP9P14780 707 aa12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 TDGF1P3P51864 188 aa12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 KLRB1Q12918 225 aa12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 C10orf91Q5T1B1 145 aa12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 WDR82Q6UXN9 313 aa12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 ACP7Q6ZNF0 438 aa12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 UBALD1Q8TB05 177 aa12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 SLC25A31Q9H0C2 315 aa12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 MAGT1Q9H0U3 335 aa12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 TMEM231Q9H6L2 316 aa12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 PLEKHF2Q9H8W4 249 aa12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 MSL2Q9HCI7 577 aa12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 UQCC1Q9NVA1 299 aa12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 RBM7Q9Y580 266 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-212ENST00000559974 IGSF23A1L1A6 192 aa12.17□□□□□ -0.46
RABGGTA-212ENST00000559974 DANCRP0C864 163 aa12.17□□□□□ -0.46
RABGGTA-212ENST00000559974 SLC25A6P12236 298 aa12.17□□□□□ -0.46
RABGGTA-212ENST00000559974 EIF2S3LQ2VIR3 472 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-212ENST00000559974 SLC35E4Q6ICL7 350 aa12.17□□□□□ -0.46
RABGGTA-212ENST00000559974 SPAG16Q8N0X2 631 aa12.17□□□□□ -0.46
RABGGTA-212ENST00000559974 SVBPQ8N300 66 aa12.17□□□□□ -0.46
RABGGTA-212ENST00000559974 LYPD6BQ8NI32 183 aa12.17□□□□□ -0.46
RABGGTA-212ENST00000559974 PRR7Q8TB68 274 aa12.17□□□□□ -0.46
RABGGTA-212ENST00000559974 KCNIP1Q9NZI2 227 aa12.17□□□□□ -0.46
RABGGTA-212ENST00000559974 KCNS2Q9ULS6 477 aa12.17□□□□□ -0.46
RABGGTA-212ENST00000559974 CARHSP1Q9Y2V2 147 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-212ENST00000559974 FAM215AQ9Y5M1 114 aa12.17□□□□□ -0.46
RABGGTA-212ENST00000559974 CACNA1DQ01668 2161 aa12.16□□□□□ -0.46
RABGGTA-212ENST00000559974 A0A0G2JRQ6 117 aa12.16□□□□□ -0.46
RABGGTA-212ENST00000559974 A0A1B0GWJ7 208 aa12.16□□□□□ -0.46
RABGGTA-212ENST00000559974 F8W036 122 aa12.16□□□□□ -0.46
RABGGTA-212ENST00000559974 PITX3O75364 302 aa12.16□□□□□ -0.46
RABGGTA-212ENST00000559974 MUC1P15941 1255 aaPredicted RBP12.16□□□□□ -0.46
RABGGTA-212ENST00000559974 CEACAM6P40199 344 aa12.16□□□□□ -0.46
RABGGTA-212ENST00000559974 FAM180AQ6UWF9 173 aa12.16□□□□□ -0.46
RABGGTA-212ENST00000559974 TMEM252Q8N6L7 170 aa12.16□□□□□ -0.46
RABGGTA-212ENST00000559974 UFSP2Q9NUQ7 469 aa12.16□□□□□ -0.46
RABGGTA-212ENST00000559974 PPP1R3CQ9UQK1 317 aa12.16□□□□□ -0.46
RABGGTA-212ENST00000559974 FAM96BQ9Y3D0 163 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms