RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 GPR132Q9UNW8 380 aa10.05□□□□□ -0.8
HERC1-205ENST00000559886 OR2W1Q9Y3N9 320 aa10.05□□□□□ -0.8
HERC1-205ENST00000559886 PHF1O43189 567 aaPredicted RBP10.04□□□□□ -0.8
HERC1-205ENST00000559886 RLN1P04808 185 aa10.04□□□□□ -0.8
HERC1-205ENST00000559886 ZNF728P0DKX0 622 aa10.04□□□□□ -0.8
HERC1-205ENST00000559886 OMGP23515 440 aa10.04□□□□□ -0.8
HERC1-205ENST00000559886 UCP3P55916 312 aa10.04□□□□□ -0.8
HERC1-205ENST00000559886 FXYD4P59646 89 aa10.04□□□□□ -0.8
HERC1-205ENST00000559886 HERV-K104P61576 105 aa10.04□□□□□ -0.8
HERC1-205ENST00000559886 ESCO2Q56NI9 601 aa10.04□□□□□ -0.8
HERC1-205ENST00000559886 FXYD6Q9H0Q3 95 aa10.04□□□□□ -0.8
HERC1-205ENST00000559886 RDH8Q9NYR8 311 aa10.04□□□□□ -0.8
HERC1-205ENST00000559886 JPT1Q9UK76 154 aa10.04□□□□□ -0.8
HERC1-205ENST00000559886 VPS13CQ709C8 3753 aa10.04□□□□□ -0.8
HERC1-205ENST00000559886 MED13LQ71F56 2210 aa10.04□□□□□ -0.8
HERC1-205ENST00000559886 IGHV4-30-2A0A087WSY4 118 aa10.04□□□□□ -0.8
HERC1-205ENST00000559886 A0A0B4J293 547 aa10.04□□□□□ -0.8
HERC1-205ENST00000559886 FAM172BPA6NC97 362 aa10.04□□□□□ -0.8
HERC1-205ENST00000559886 DHFRP00374 187 aa10.04□□□□□ -0.8
HERC1-205ENST00000559886 CCL3L1P16619 93 aa10.04□□□□□ -0.8
HERC1-205ENST00000559886 DLX6P56179 175 aa10.04□□□□□ -0.8
HERC1-205ENST00000559886 GNMTQ14749 295 aa10.04□□□□□ -0.8
HERC1-205ENST00000559886 TMEM30BQ3MIR4 351 aa10.04□□□□□ -0.8
HERC1-205ENST00000559886 LY6G5BQ8NDX9 201 aa10.04□□□□□ -0.8
HERC1-205ENST00000559886 NINJ1Q92982 152 aa10.04□□□□□ -0.8
HERC1-205ENST00000559886 IDI2-AS1Q9NZ38 188 aa10.04□□□□□ -0.8
HERC1-205ENST00000559886 IGHV3-43A0A0B4J1X8 118 aa10.03□□□□□ -0.8
HERC1-205ENST00000559886 C22orf46C9J442 243 aa10.03□□□□□ -0.8
HERC1-205ENST00000559886 IGHV3-43DP0DP04 118 aa10.03□□□□□ -0.8
HERC1-205ENST00000559886 ANXA7P20073 488 aaKnown RBP10.03□□□□□ -0.8
HERC1-205ENST00000559886 PPP1CCP36873 323 aaKnown RBP10.03□□□□□ -0.8
HERC1-205ENST00000559886 BAMBIQ13145 260 aa10.03□□□□□ -0.8
HERC1-205ENST00000559886 LTC4SQ16873 150 aa10.03□□□□□ -0.8
HERC1-205ENST00000559886 TATDN3Q17R31 274 aa10.03□□□□□ -0.8
HERC1-205ENST00000559886 CLEC12BQ2HXU8 276 aa10.03□□□□□ -0.8
HERC1-205ENST00000559886 CD276Q5ZPR3 534 aa10.03□□□□□ -0.8
HERC1-205ENST00000559886 FAM53AQ6NSI3 398 aaPredicted RBP10.03□□□□□ -0.8
HERC1-205ENST00000559886 HEPN1Q6WQI6 88 aa10.03□□□□□ -0.8
HERC1-205ENST00000559886 OR10A7Q8NGE5 316 aa10.03□□□□□ -0.8
HERC1-205ENST00000559886 OR52M1Q8NGK5 317 aa10.03□□□□□ -0.8
HERC1-205ENST00000559886 TOMM40LQ969M1 308 aa10.03□□□□□ -0.8
HERC1-205ENST00000559886 RAB39BQ96DA2 213 aa10.03□□□□□ -0.8
HERC1-205ENST00000559886 PARP12Q9H0J9 701 aaKnown RBP10.03□□□□□ -0.8
HERC1-205ENST00000559886 ALX4Q9H161 411 aaPredicted RBP10.03□□□□□ -0.8
HERC1-205ENST00000559886 C5orf66Q9H5L9 145 aa10.03□□□□□ -0.8
HERC1-205ENST00000559886 UNC79Q9P2D8 2635 aa10.03□□□□□ -0.8
HERC1-205ENST00000559886 IGKV1D-13A0A0B4J2D9 117 aa10.02□□□□□ -0.8
HERC1-205ENST00000559886 KIAA1324LA8MWY0 1029 aaPredicted RBP10.02□□□□□ -0.8
HERC1-205ENST00000559886 YPEL1O60688 119 aa10.02□□□□□ -0.8
HERC1-205ENST00000559886 MMP23AO75900 390 aa10.02□□□□□ -0.8
HERC1-205ENST00000559886 IGKV1-13P0DP09 117 aa10.02□□□□□ -0.8
HERC1-205ENST00000559886 PGAM2P15259 253 aa10.02□□□□□ -0.8
HERC1-205ENST00000559886 MORN2Q502X0 79 aa10.02□□□□□ -0.8
HERC1-205ENST00000559886 LDLRAD3Q86YD5 345 aa10.02□□□□□ -0.8
HERC1-205ENST00000559886 ZFAND1Q8TCF1 268 aa10.02□□□□□ -0.8
HERC1-205ENST00000559886 YPEL2Q96QA6 119 aa10.02□□□□□ -0.8
HERC1-205ENST00000559886 RTBDNQ9BSG5 229 aaPredicted RBP10.02□□□□□ -0.8
HERC1-205ENST00000559886 GFOD1Q9NXC2 390 aa10.02□□□□□ -0.8
HERC1-205ENST00000559886 GNG12Q9UBI6 72 aa10.02□□□□□ -0.8
HERC1-205ENST00000559886 LOC105371242A0A075B767 164 aa10.02□□□□□ -0.81
HERC1-205ENST00000559886 PPIAL4CA0A0B4J2A2 164 aa10.02□□□□□ -0.81
HERC1-205ENST00000559886 IGHV4-61A0A0C4DH41 118 aa10.02□□□□□ -0.81
HERC1-205ENST00000559886 A8MXK9 166 aa10.02□□□□□ -0.81
HERC1-205ENST00000559886 PPIAL4GP0DN37 164 aa10.02□□□□□ -0.81
HERC1-205ENST00000559886 PRAMEF5Q5TYX0 476 aa10.02□□□□□ -0.81
HERC1-205ENST00000559886 TMED4Q7Z7H5 227 aa10.02□□□□□ -0.81
HERC1-205ENST00000559886 SLC25A42Q86VD7 318 aa10.02□□□□□ -0.81
HERC1-205ENST00000559886 OR10V1Q8NGI7 309 aa10.02□□□□□ -0.81
HERC1-205ENST00000559886 RSRP1Q9BUV0 290 aa10.02□□□□□ -0.81
HERC1-205ENST00000559886 BEX2Q9BXY8 128 aa10.02□□□□□ -0.81
HERC1-205ENST00000559886 BEX1Q9HBH7 125 aa10.02□□□□□ -0.81
HERC1-205ENST00000559886 hCG_2014768A0A024R1R8 64 aa10.01□□□□□ -0.81
HERC1-205ENST00000559886 A0A1W2PPH5 198 aa10.01□□□□□ -0.81
HERC1-205ENST00000559886 C17orf98A8MV24 154 aa10.01□□□□□ -0.81
HERC1-205ENST00000559886 PRAF2O60831 178 aa10.01□□□□□ -0.81
HERC1-205ENST00000559886 IL5P05113 134 aa10.01□□□□□ -0.81
HERC1-205ENST00000559886 CTSDP07339 412 aaPredicted RBP10.01□□□□□ -0.81
HERC1-205ENST00000559886 VSIG10L2P0DP72 767 aa10.01□□□□□ -0.81
HERC1-205ENST00000559886 PI3P19957 117 aa10.01□□□□□ -0.81
HERC1-205ENST00000559886 ZFP36P26651 326 aaKnown RBP10.01□□□□□ -0.81
HERC1-205ENST00000559886 LUMP51884 338 aaPredicted RBP10.01□□□□□ -0.81
HERC1-205ENST00000559886 LY6G6FQ5SQ64 297 aa10.01□□□□□ -0.81
HERC1-205ENST00000559886 LPCAT3Q6P1A2 487 aa10.01□□□□□ -0.81
HERC1-205ENST00000559886 SLC38A6Q8IZM9 456 aa10.01□□□□□ -0.81
HERC1-205ENST00000559886 C11orf42Q8N5U0 333 aa10.01□□□□□ -0.81
HERC1-205ENST00000559886 ADAD2Q8NCV1 583 aaKnown RBP10.01□□□□□ -0.81
HERC1-205ENST00000559886 SECTM1Q8WVN6 248 aa10.01□□□□□ -0.81
HERC1-205ENST00000559886 ZNF221Q9UK13 617 aa10.01□□□□□ -0.81
HERC1-205ENST00000559886 ABCA2Q9BZC7 2435 aa10.01□□□□□ -0.81
HERC1-205ENST00000559886 WNK2Q9Y3S1 2297 aa10.01□□□□□ -0.81
HERC1-205ENST00000559886 HECTD1Q9ULT8 2610 aa10.01□□□□□ -0.81
HERC1-205ENST00000559886 RGS11O94810 467 aa10.01□□□□□ -0.81
HERC1-205ENST00000559886 LIPFP07098 398 aa10.01□□□□□ -0.81
HERC1-205ENST00000559886 SLC25A16P16260 332 aa10.01□□□□□ -0.81
HERC1-205ENST00000559886 GNRHRP30968 328 aa10.01□□□□□ -0.81
HERC1-205ENST00000559886 ERVFRD-1P60508 538 aa10.01□□□□□ -0.81
HERC1-205ENST00000559886 CAPSLQ8WWF8 208 aa10.01□□□□□ -0.81
HERC1-205ENST00000559886 DMRTB1Q96MA1 342 aa10.01□□□□□ -0.81
HERC1-205ENST00000559886 SLC5A7Q9GZV3 580 aa10.01□□□□□ -0.81
HERC1-205ENST00000559886 C14orf166Q9Y224 244 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms