RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 LHX4Q969G2 390 aa9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 POM121Q96HA1 1249 aa9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 RCL1Q9Y2P8 373 aaKnown RBP9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 PPIAL4EA0A075B759 164 aa9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 IGHV3-43A0A0B4J1X8 118 aa9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 TRAV39A0A0B4J263 110 aa9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 FER1L5A0AVI2 2057 aa9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 PPIAL4DF5H284 164 aa9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 CLDN34H7C241 214 aa9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 TCAPO15273 167 aa9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 SOCS1O15524 211 aa9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 LMX1BO60663 402 aa9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 PPIAL4FP0DN26 164 aa9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 IGHV3-43DP0DP04 118 aa9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 COX5BP10606 129 aa9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 GAS1P54826 345 aa9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 RPS16P62249 146 aaKnown RBP9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 ABLIM2Q6H8Q1 611 aa9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 OR8G2PQ6IF36 304 aa9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 DOLPP1Q86YN1 238 aa9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 MUC15Q8N387 334 aa9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 RBMXL3Q8N7X1 1067 aaKnown RBP9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 BCL2L2Q92843 193 aaPredicted RBP9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 TAAR6Q96RI8 345 aa9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 HEYLQ9NQ87 328 aaPredicted RBP9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 CLN8Q9UBY8 286 aa9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 PPIAL4AQ9Y536 164 aa9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 PTPN13Q12923 2485 aa9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 A0A0G2JK05 382 aa9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 TMEM8BA6NDV4 472 aa9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 PRR30Q53SZ7 412 aaPredicted RBP9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 BTF3L4Q96K17 158 aa9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 GTF3C1Q12789 2109 aa9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 H3BP45 60 aa9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 RCC1P18754 421 aaPredicted RBP9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 GNLYP22749 145 aa9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 CD40P25942 277 aa9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 FOXG1P55316 489 aaPredicted RBP9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 POLR2GP62487 172 aaKnown RBP eCLIP9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 PRAMEF5Q5TYX0 476 aa9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 MOB3BQ86TA1 216 aa9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 MRPL13Q9BYD1 178 aaKnown RBP9.17□□□□□ -0.94
CARMIL3-202ENST00000559694 MDFIC2A0A1B0GVS7 189 aa9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 LRP5LA4QPB2 252 aa9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 HAND1O96004 215 aa9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 CEACAM6P40199 344 aa9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 RAB31Q13636 194 aa9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 C2orf68Q2NKX9 166 aa9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 CEACAM21Q3KPI0 293 aa9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 PIGYQ3MUY2 71 aa9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 NCR3LG1Q68D85 454 aa9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 CLEC2AQ6UVW9 174 aa9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 H2BFWTQ7Z2G1 175 aa9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 LYG1Q8N1E2 194 aa9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 OR8G5Q8NG78 346 aa9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 OR8B3Q8NGG8 313 aa9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 OR8B2Q96RD0 313 aa9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 WDR13Q9H1Z4 485 aa9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 ZDHHC11Q9H8X9 412 aa9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 RNF122Q9H9V4 155 aa9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 NPTNQ9Y639 398 aa9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 BAXQ07812 192 aa9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 C21orf62-AS1Q17RA5 79 aa9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 MED13Q9UHV7 2174 aa9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 PHF3Q92576 2039 aaKnown RBP9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 PROB1E7EW31 1015 aa9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 SYNGR3O43761 229 aa9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 VSIG8P0DPA2 414 aa9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 ZBTB25P24278 435 aa9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 GLRXP35754 106 aa9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 ATP5J2P56134 94 aa9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 PDLIM3Q53GG5 364 aaPredicted RBP9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 OR13D1Q8NGV5 346 aa9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 RNASE6Q93091 150 aaKnown RBP9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 ARV1Q9H2C2 271 aa9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 PARP11Q9NR21 331 aa9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 OR6C3Q9NZP0 311 aa9.16□□□□□ -0.94
CARMIL3-202ENST00000559694 SS18L1O75177 396 aaPredicted RBP9.15□□□□□ -0.94
CARMIL3-202ENST00000559694 RPL29P47914 159 aaKnown RBP9.15□□□□□ -0.94
CARMIL3-202ENST00000559694 IGFBP7Q16270 282 aa9.15□□□□□ -0.94
CARMIL3-202ENST00000559694 GABRA6Q16445 453 aa9.15□□□□□ -0.94
CARMIL3-202ENST00000559694 ZIC4Q8N9L1 334 aa9.15□□□□□ -0.94
CARMIL3-202ENST00000559694 PRDM14Q9GZV8 571 aa9.15□□□□□ -0.94
CARMIL3-202ENST00000559694 ZNF665Q9H7R5 613 aa9.15□□□□□ -0.94
CARMIL3-202ENST00000559694 GSN-AS1Q9NRJ2 163 aa9.15□□□□□ -0.94
CARMIL3-202ENST00000559694 FAM206AQ9NX38 181 aa9.15□□□□□ -0.94
CARMIL3-202ENST00000559694 MYO18BQ8IUG5 2567 aa9.15□□□□□ -0.94
CARMIL3-202ENST00000559694 TMEM210A6NLX4 147 aa9.15□□□□□ -0.94
CARMIL3-202ENST00000559694 M0R1X1 148 aa9.15□□□□□ -0.94
CARMIL3-202ENST00000559694 RPP30P78346 268 aaKnown RBP9.15□□□□□ -0.94
CARMIL3-202ENST00000559694 BSPH1Q075Z2 132 aa9.15□□□□□ -0.94
CARMIL3-202ENST00000559694 RNF151Q2KHN1 245 aa9.15□□□□□ -0.94
CARMIL3-202ENST00000559694 KHDC1LQ5JSQ8 128 aa9.15□□□□□ -0.94
CARMIL3-202ENST00000559694 DHRS7BQ6IAN0 325 aaPredicted RBP9.15□□□□□ -0.94
CARMIL3-202ENST00000559694 PACRGQ96M98 296 aaPredicted RBP9.15□□□□□ -0.94
CARMIL3-202ENST00000559694 PSG11Q9UQ72 335 aa9.15□□□□□ -0.94
CARMIL3-202ENST00000559694 RBFOX3A6NFN3 312 aa9.15□□□□□ -0.95
CARMIL3-202ENST00000559694 CELA3BP08861 270 aa9.15□□□□□ -0.95
CARMIL3-202ENST00000559694 PRF1P14222 555 aa9.15□□□□□ -0.95
CARMIL3-202ENST00000559694 SRP14P37108 136 aaKnown RBP9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms