RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 SCGNO76038 276 aa16.38■□□□□ 0.21
TSPAN3-207ENST00000559494 RAB13P51153 203 aa16.38■□□□□ 0.21
TSPAN3-207ENST00000559494 HTD2P86397 168 aa16.38■□□□□ 0.21
TSPAN3-207ENST00000559494 ARFRP1Q13795 201 aa16.38■□□□□ 0.21
TSPAN3-207ENST00000559494 ARL6IP1Q15041 203 aa16.38■□□□□ 0.21
TSPAN3-207ENST00000559494 AANATQ16613 207 aa16.38■□□□□ 0.21
TSPAN3-207ENST00000559494 LRRC75BQ2VPJ9 315 aa16.38■□□□□ 0.21
TSPAN3-207ENST00000559494 TMEM30BQ3MIR4 351 aa16.38■□□□□ 0.21
TSPAN3-207ENST00000559494 MORN2Q502X0 79 aa16.38■□□□□ 0.21
TSPAN3-207ENST00000559494 ZNF439Q8NDP4 499 aa16.38■□□□□ 0.21
TSPAN3-207ENST00000559494 RAB2BQ8WUD1 216 aa16.38■□□□□ 0.21
TSPAN3-207ENST00000559494 GALMQ96C23 342 aa16.38■□□□□ 0.21
TSPAN3-207ENST00000559494 GNG12Q9UBI6 72 aa16.38■□□□□ 0.21
TSPAN3-207ENST00000559494 TRAV18A0A075B6X5 111 aa16.37■□□□□ 0.21
TSPAN3-207ENST00000559494 VGLL3A8MV65 326 aa16.37■□□□□ 0.21
TSPAN3-207ENST00000559494 H3BUX3 64 aa16.37■□□□□ 0.21
TSPAN3-207ENST00000559494 SLC31A2O15432 143 aa16.37■□□□□ 0.21
TSPAN3-207ENST00000559494 GSTP1P09211 210 aaKnown RBP16.37■□□□□ 0.21
TSPAN3-207ENST00000559494 SCTP09683 121 aa16.37■□□□□ 0.21
TSPAN3-207ENST00000559494 ZNF134P52741 427 aa16.37■□□□□ 0.21
TSPAN3-207ENST00000559494 GNMTQ14749 295 aa16.37■□□□□ 0.21
TSPAN3-207ENST00000559494 Q3ZCU0 254 aa16.37■□□□□ 0.21
TSPAN3-207ENST00000559494 CT45A1Q5HYN5 189 aa16.37■□□□□ 0.21
TSPAN3-207ENST00000559494 TPTE2P1Q5T6R2 138 aa16.37■□□□□ 0.21
TSPAN3-207ENST00000559494 HACD4Q5VWC8 232 aa16.37■□□□□ 0.21
TSPAN3-207ENST00000559494 IZUMO1Q8IYV9 350 aa16.37■□□□□ 0.21
TSPAN3-207ENST00000559494 LINC00311Q8N616 119 aa16.37■□□□□ 0.21
TSPAN3-207ENST00000559494 SAMD12Q8N8I0 201 aa16.37■□□□□ 0.21
TSPAN3-207ENST00000559494 C8orf31Q8N9H6 132 aa16.37■□□□□ 0.21
TSPAN3-207ENST00000559494 CT45A3Q8NHU0 189 aa16.37■□□□□ 0.21
TSPAN3-207ENST00000559494 CREB3L1Q96BA8 519 aa16.37■□□□□ 0.21
TSPAN3-207ENST00000559494 ISOC1Q96CN7 298 aa16.37■□□□□ 0.21
TSPAN3-207ENST00000559494 C19orf24Q9BVV8 132 aa16.37■□□□□ 0.21
TSPAN3-207ENST00000559494 COMMD3Q9UBI1 195 aa16.37■□□□□ 0.21
TSPAN3-207ENST00000559494 MGAT4AQ9UM21 535 aa16.37■□□□□ 0.21
TSPAN3-207ENST00000559494 A0A0A6YYH2 397 aa16.36■□□□□ 0.21
TSPAN3-207ENST00000559494 TMEM235A6NFC5 223 aa16.36■□□□□ 0.21
TSPAN3-207ENST00000559494 A6NJ64 397 aa16.36■□□□□ 0.21
TSPAN3-207ENST00000559494 TRDCB7Z8K6 153 aa16.36■□□□□ 0.21
TSPAN3-207ENST00000559494 FCGR3AP08637 254 aa16.36■□□□□ 0.21
TSPAN3-207ENST00000559494 PPP1CCP36873 323 aaKnown RBP16.36■□□□□ 0.21
TSPAN3-207ENST00000559494 HLA-DRB3P79483 266 aa16.36■□□□□ 0.21
TSPAN3-207ENST00000559494 MRPS15P82914 257 aaKnown RBP16.36■□□□□ 0.21
TSPAN3-207ENST00000559494 IL1F10Q8WWZ1 152 aa16.36■□□□□ 0.21
TSPAN3-207ENST00000559494 MAFIPQ8WZ33 124 aa16.36■□□□□ 0.21
TSPAN3-207ENST00000559494 PHF21AQ96BD5 680 aa16.36■□□□□ 0.21
TSPAN3-207ENST00000559494 BCL7BQ9BQE9 202 aa16.36■□□□□ 0.21
TSPAN3-207ENST00000559494 RBM38Q9H0Z9 239 aaKnown RBP16.36■□□□□ 0.21
TSPAN3-207ENST00000559494 DIABLOQ9NR28 239 aa16.36■□□□□ 0.21
TSPAN3-207ENST00000559494 ZNF230Q9UIE0 474 aaPredicted RBP16.36■□□□□ 0.21
TSPAN3-207ENST00000559494 JPT1Q9UK76 154 aa16.36■□□□□ 0.21
TSPAN3-207ENST00000559494 H3BMQ9 156 aa16.35■□□□□ 0.21
TSPAN3-207ENST00000559494 YPEL1O60688 119 aa16.35■□□□□ 0.21
TSPAN3-207ENST00000559494 ZNF182P17025 639 aaPredicted RBP16.35■□□□□ 0.21
TSPAN3-207ENST00000559494 CEACAM3P40198 252 aa16.35■□□□□ 0.21
TSPAN3-207ENST00000559494 DIAPH2-AS1Q14236 149 aa16.35■□□□□ 0.21
TSPAN3-207ENST00000559494 UBE2NLQ5JXB2 153 aa16.35■□□□□ 0.21
TSPAN3-207ENST00000559494 SLC25A48Q6ZT89 311 aaKnown RBP16.35■□□□□ 0.21
TSPAN3-207ENST00000559494 DTX3Q8N9I9 347 aa16.35■□□□□ 0.21
TSPAN3-207ENST00000559494 OR10X1Q8NGY0 326 aa16.35■□□□□ 0.21
TSPAN3-207ENST00000559494 OR5R1Q8NH85 324 aa16.35■□□□□ 0.21
TSPAN3-207ENST00000559494 ACOT12Q8WYK0 555 aa16.35■□□□□ 0.21
TSPAN3-207ENST00000559494 TAF15Q92804 592 aaKnown RBP eCLIP16.35■□□□□ 0.21
TSPAN3-207ENST00000559494 S100A16Q96FQ6 103 aaKnown RBP16.35■□□□□ 0.21
TSPAN3-207ENST00000559494 YPEL2Q96QA6 119 aa16.35■□□□□ 0.21
TSPAN3-207ENST00000559494 OCSTAMPQ9BR26 566 aa16.35■□□□□ 0.21
TSPAN3-207ENST00000559494 VPREB3Q9UKI3 123 aa16.35■□□□□ 0.21
TSPAN3-207ENST00000559494 AMMECR1Q9Y4X0 333 aaPredicted RBP16.35■□□□□ 0.21
TSPAN3-207ENST00000559494 IGKV1-6A0A0C4DH72 117 aa16.34■□□□□ 0.21
TSPAN3-207ENST00000559494 BTBD17A6NE02 478 aa16.34■□□□□ 0.21
TSPAN3-207ENST00000559494 FAM181BA6NEQ2 426 aa16.34■□□□□ 0.21
TSPAN3-207ENST00000559494 SSX5O60225 188 aa16.34■□□□□ 0.21
TSPAN3-207ENST00000559494 GPR137BO60478 399 aa16.34■□□□□ 0.21
TSPAN3-207ENST00000559494 TALDO1P37837 337 aa16.34■□□□□ 0.21
TSPAN3-207ENST00000559494 MADCAM1Q13477 382 aa16.34■□□□□ 0.21
TSPAN3-207ENST00000559494 LY6EQ16553 131 aa16.34■□□□□ 0.21
TSPAN3-207ENST00000559494 PNLIPRP3Q17RR3 467 aa16.34■□□□□ 0.21
TSPAN3-207ENST00000559494 LY6G6FQ5SQ64 297 aa16.34■□□□□ 0.21
TSPAN3-207ENST00000559494 NUDCD2Q8WVJ2 157 aa16.34■□□□□ 0.21
TSPAN3-207ENST00000559494 IGKV1D-8A0A087WSZ0 117 aa16.33■□□□□ 0.2
TSPAN3-207ENST00000559494 XRCC3O43542 346 aa16.33■□□□□ 0.2
TSPAN3-207ENST00000559494 EIF4EP06730 217 aaKnown RBP16.33■□□□□ 0.2
TSPAN3-207ENST00000559494 GSTT2P0CG29 244 aa16.33■□□□□ 0.2
TSPAN3-207ENST00000559494 GSTT2BP0CG30 244 aa16.33■□□□□ 0.2
TSPAN3-207ENST00000559494 DYNLT3P51808 116 aa16.33■□□□□ 0.2
TSPAN3-207ENST00000559494 SRSF7Q16629 238 aaKnown RBP eCLIP16.33■□□□□ 0.2
TSPAN3-207ENST00000559494 STEAP3Q658P3 488 aa16.33■□□□□ 0.2
TSPAN3-207ENST00000559494 ST6GALNAC6Q969X2 333 aa16.33■□□□□ 0.2
TSPAN3-207ENST00000559494 RPEQ96AT9 228 aa16.33■□□□□ 0.2
TSPAN3-207ENST00000559494 CMTM3Q96MX0 182 aa16.33■□□□□ 0.2
TSPAN3-207ENST00000559494 AUNIPQ9H7T9 357 aa16.33■□□□□ 0.2
TSPAN3-207ENST00000559494 CCDC160A6NGH7 325 aa16.32■□□□□ 0.2
TSPAN3-207ENST00000559494 OOSP1A8MZH6 123 aa16.32■□□□□ 0.2
TSPAN3-207ENST00000559494 FABP7O15540 132 aa16.32■□□□□ 0.2
TSPAN3-207ENST00000559494 NOL3O60936 208 aaKnown RBP16.32■□□□□ 0.2
TSPAN3-207ENST00000559494 PTHLHP12272 177 aa16.32■□□□□ 0.2
TSPAN3-207ENST00000559494 DTYMKP23919 212 aa16.32■□□□□ 0.2
TSPAN3-207ENST00000559494 GNG2P59768 71 aa16.32■□□□□ 0.2
TSPAN3-207ENST00000559494 PITPNAQ00169 270 aa16.32■□□□□ 0.2
TSPAN3-207ENST00000559494 HERPUD1Q15011 391 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms