RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 TM2D1Q9BX74 207 aa10.04□□□□□ -0.8
LRRC28-214ENST00000559433 Q9H521 79 aa10.04□□□□□ -0.8
LRRC28-214ENST00000559433 TAF9BQ9HBM6 251 aa10.04□□□□□ -0.8
LRRC28-214ENST00000559433 ACOT13Q9NPJ3 140 aa10.04□□□□□ -0.8
LRRC28-214ENST00000559433 AK6Q9Y3D8 172 aaKnown RBP10.04□□□□□ -0.8
LRRC28-214ENST00000559433 IGHV1-3A0A0C4DH29 117 aa10.03□□□□□ -0.8
LRRC28-214ENST00000559433 TMEM14DPA8MWL7 114 aa10.03□□□□□ -0.8
LRRC28-214ENST00000559433 SLC17A2O00624 439 aa10.03□□□□□ -0.8
LRRC28-214ENST00000559433 SLC31A2O15432 143 aa10.03□□□□□ -0.8
LRRC28-214ENST00000559433 KCNAB3O43448 404 aa10.03□□□□□ -0.8
LRRC28-214ENST00000559433 GAPDHP04406 335 aaKnown RBP10.03□□□□□ -0.8
LRRC28-214ENST00000559433 AMY1AP04745 511 aa10.03□□□□□ -0.8
LRRC28-214ENST00000559433 AMY2AP04746 511 aa10.03□□□□□ -0.8
LRRC28-214ENST00000559433 CD37P11049 281 aa10.03□□□□□ -0.8
LRRC28-214ENST00000559433 ARSBP15848 533 aa10.03□□□□□ -0.8
LRRC28-214ENST00000559433 GABARAPL2P60520 117 aa10.03□□□□□ -0.8
LRRC28-214ENST00000559433 QRFPP83859 136 aa10.03□□□□□ -0.8
LRRC28-214ENST00000559433 HNF4GQ14541 408 aa10.03□□□□□ -0.8
LRRC28-214ENST00000559433 Q3ZCU0 254 aa10.03□□□□□ -0.8
LRRC28-214ENST00000559433 C6orf201Q7Z4U5 140 aa10.03□□□□□ -0.8
LRRC28-214ENST00000559433 NDUFA11Q86Y39 141 aa10.03□□□□□ -0.8
LRRC28-214ENST00000559433 WIPF2Q8TF74 440 aaPredicted RBP10.03□□□□□ -0.8
LRRC28-214ENST00000559433 R3HDM4Q96D70 268 aa10.03□□□□□ -0.8
LRRC28-214ENST00000559433 FAAP24Q9BTP7 215 aa10.03□□□□□ -0.8
LRRC28-214ENST00000559433 CHMP1AQ9HD42 196 aaPredicted RBP10.03□□□□□ -0.8
LRRC28-214ENST00000559433 OR2S2Q9NQN1 319 aa10.03□□□□□ -0.8
LRRC28-214ENST00000559433 MBNL3Q9NUK0 354 aaKnown RBP10.03□□□□□ -0.8
LRRC28-214ENST00000559433 NOTCH1P46531 2555 aa10.03□□□□□ -0.8
LRRC28-214ENST00000559433 A0A0A6YYD4 124 aa10.02□□□□□ -0.81
LRRC28-214ENST00000559433 IGHV3-72A0A0B4J1Y9 119 aa10.02□□□□□ -0.81
LRRC28-214ENST00000559433 TCRBV4S1A1TA0A5B7 111 aa10.02□□□□□ -0.81
LRRC28-214ENST00000559433 OPN1MWP04001 364 aa10.02□□□□□ -0.81
LRRC28-214ENST00000559433 OPN1MW2P0DN77 364 aa10.02□□□□□ -0.81
LRRC28-214ENST00000559433 OPN1MW3P0DN78 364 aa10.02□□□□□ -0.81
LRRC28-214ENST00000559433 BLVRBP30043 206 aaPredicted RBP10.02□□□□□ -0.81
LRRC28-214ENST00000559433 GNMTQ14749 295 aa10.02□□□□□ -0.81
LRRC28-214ENST00000559433 SSX1Q16384 188 aa10.02□□□□□ -0.81
LRRC28-214ENST00000559433 PDLIM3Q53GG5 364 aaPredicted RBP10.02□□□□□ -0.81
LRRC28-214ENST00000559433 CT45A1Q5HYN5 189 aa10.02□□□□□ -0.81
LRRC28-214ENST00000559433 SLC25A48Q6ZT89 311 aaKnown RBP10.02□□□□□ -0.81
LRRC28-214ENST00000559433 OR2W3Q7Z3T1 314 aa10.02□□□□□ -0.81
LRRC28-214ENST00000559433 ZNF554Q86TJ5 538 aa10.02□□□□□ -0.81
LRRC28-214ENST00000559433 SVOPQ8N4V2 548 aa10.02□□□□□ -0.81
LRRC28-214ENST00000559433 ZNF439Q8NDP4 499 aa10.02□□□□□ -0.81
LRRC28-214ENST00000559433 CT45A3Q8NHU0 189 aa10.02□□□□□ -0.81
LRRC28-214ENST00000559433 RTN4IP1Q8WWV3 396 aaPredicted RBP10.02□□□□□ -0.81
LRRC28-214ENST00000559433 CITED2Q99967 270 aaPredicted RBP10.02□□□□□ -0.81
LRRC28-214ENST00000559433 URM1Q9BTM9 101 aaKnown RBP10.02□□□□□ -0.81
LRRC28-214ENST00000559433 PLEKHJ1Q9NW61 149 aa10.02□□□□□ -0.81
LRRC28-214ENST00000559433 NDUFB11Q9NX14 153 aa10.02□□□□□ -0.81
LRRC28-214ENST00000559433 A0A1W2PRX2 142 aa10.01□□□□□ -0.81
LRRC28-214ENST00000559433 NCBP2LA6PVI3 153 aaKnown RBP10.01□□□□□ -0.81
LRRC28-214ENST00000559433 MRPS14O60783 128 aaKnown RBP10.01□□□□□ -0.81
LRRC28-214ENST00000559433 ZNF134P52741 427 aa10.01□□□□□ -0.81
LRRC28-214ENST00000559433 CLDN12P56749 244 aa10.01□□□□□ -0.81
LRRC28-214ENST00000559433 C5orf24Q7Z6I8 188 aa10.01□□□□□ -0.81
LRRC28-214ENST00000559433 C1QL4Q86Z23 238 aa10.01□□□□□ -0.81
LRRC28-214ENST00000559433 IZUMO1Q8IYV9 350 aa10.01□□□□□ -0.81
LRRC28-214ENST00000559433 C5orf56Q8N8D9 126 aa10.01□□□□□ -0.81
LRRC28-214ENST00000559433 OR51D1Q8NGF3 324 aa10.01□□□□□ -0.81
LRRC28-214ENST00000559433 OR4X2Q8NGF9 303 aa10.01□□□□□ -0.81
LRRC28-214ENST00000559433 OR52L2PQ8NGH6 319 aa10.01□□□□□ -0.81
LRRC28-214ENST00000559433 SETD6Q8TBK2 473 aa10.01□□□□□ -0.81
LRRC28-214ENST00000559433 ST6GALNAC6Q969X2 333 aa10.01□□□□□ -0.81
LRRC28-214ENST00000559433 LPAR5Q9H1C0 372 aa10.01□□□□□ -0.81
LRRC28-214ENST00000559433 ABRACLQ9P1F3 81 aa10.01□□□□□ -0.81
LRRC28-214ENST00000559433 JPT1Q9UK76 154 aa10.01□□□□□ -0.81
LRRC28-214ENST00000559433 V9GY05 133 aa10.01□□□□□ -0.81
LRRC28-214ENST00000559433 PLXNB1O43157 2135 aa10□□□□□ -0.81
LRRC28-214ENST00000559433 PDCD5O14737 125 aa10□□□□□ -0.81
LRRC28-214ENST00000559433 SOCS1O15524 211 aa10□□□□□ -0.81
LRRC28-214ENST00000559433 FGF16O43320 207 aa10□□□□□ -0.81
LRRC28-214ENST00000559433 TXNL1O43396 289 aa10□□□□□ -0.81
LRRC28-214ENST00000559433 DENRO43583 198 aaKnown RBP10□□□□□ -0.81
LRRC28-214ENST00000559433 RGS11O94810 467 aa10□□□□□ -0.81
LRRC28-214ENST00000559433 PF4V1P10720 104 aa10□□□□□ -0.81
LRRC28-214ENST00000559433 MYL9P24844 172 aa10□□□□□ -0.81
LRRC28-214ENST00000559433 PPP1CCP36873 323 aaKnown RBP10□□□□□ -0.81
LRRC28-214ENST00000559433 RANBP1P43487 201 aa10□□□□□ -0.81
LRRC28-214ENST00000559433 PSMD7P51665 324 aa10□□□□□ -0.81
LRRC28-214ENST00000559433 ZNF137PP52743 207 aa10□□□□□ -0.81
LRRC28-214ENST00000559433 HTD2P86397 168 aa10□□□□□ -0.81
LRRC28-214ENST00000559433 HMGN3Q15651 99 aa10□□□□□ -0.81
LRRC28-214ENST00000559433 MORN2Q502X0 79 aa10□□□□□ -0.81
LRRC28-214ENST00000559433 OXLD1Q5BKU9 147 aa10□□□□□ -0.81
LRRC28-214ENST00000559433 KHDC1LQ5JSQ8 128 aa10□□□□□ -0.81
LRRC28-214ENST00000559433 HES5Q5TA89 166 aa10□□□□□ -0.81
LRRC28-214ENST00000559433 MOB1BQ7L9L4 216 aa10□□□□□ -0.81
LRRC28-214ENST00000559433 TGIF2LXQ8IUE1 241 aa10□□□□□ -0.81
LRRC28-214ENST00000559433 OR2T10Q8NGZ9 312 aa10□□□□□ -0.81
LRRC28-214ENST00000559433 FAM3DQ96BQ1 224 aa10□□□□□ -0.81
LRRC28-214ENST00000559433 GALMQ96C23 342 aa10□□□□□ -0.81
LRRC28-214ENST00000559433 EAF1Q96JC9 268 aaPredicted RBP10□□□□□ -0.81
LRRC28-214ENST00000559433 ABHD14AQ9BUJ0 271 aa10□□□□□ -0.81
LRRC28-214ENST00000559433 STEAP1Q9UHE8 339 aa10□□□□□ -0.81
LRRC28-214ENST00000559433 AK3Q9UIJ7 227 aa10□□□□□ -0.81
LRRC28-214ENST00000559433 LRRC42Q9Y546 428 aa10□□□□□ -0.81
LRRC28-214ENST00000559433 TRAV1-2A0A0B4J238 106 aa9.99□□□□□ -0.81
LRRC28-214ENST00000559433 ADARB2-AS1A8MUL3 147 aa9.99□□□□□ -0.81
LRRC28-214ENST00000559433 NAPSAO96009 420 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms