RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 SRRM5B3KS81 715 aa13.37□□□□□ -0.27
USP8-208ENST00000559329 FBXO24O75426 580 aa13.37□□□□□ -0.27
USP8-208ENST00000559329 CRYAAP02489 173 aa13.37□□□□□ -0.27
USP8-208ENST00000559329 COL10A1Q03692 680 aa13.37□□□□□ -0.27
USP8-208ENST00000559329 Q8NA96 180 aa13.37□□□□□ -0.27
USP8-208ENST00000559329 LRRC29Q8WV35 223 aa13.37□□□□□ -0.27
USP8-208ENST00000559329 TMEM171Q8WVE6 324 aa13.37□□□□□ -0.27
USP8-208ENST00000559329 MUCL1Q96DR8 90 aa13.37□□□□□ -0.27
USP8-208ENST00000559329 MS4A7Q9GZW8 240 aaPredicted RBP13.37□□□□□ -0.27
USP8-208ENST00000559329 SEBOXQ9HB31 216 aaPredicted RBP13.37□□□□□ -0.27
USP8-208ENST00000559329 TP53TG5Q9Y2B4 290 aa13.37□□□□□ -0.27
USP8-208ENST00000559329 RNF115Q9Y4L5 304 aa13.37□□□□□ -0.27
USP8-208ENST00000559329 CHD3Q12873 2000 aaKnown RBP13.37□□□□□ -0.27
USP8-208ENST00000559329 HEATR1Q9H583 2144 aaKnown RBP13.36□□□□□ -0.27
USP8-208ENST00000559329 BORCS7-ASMTA0A0B4J1R7 106 aa13.36□□□□□ -0.27
USP8-208ENST00000559329 A0A1B0GU03 582 aa13.36□□□□□ -0.27
USP8-208ENST00000559329 KIAA1324LA8MWY0 1029 aaPredicted RBP13.36□□□□□ -0.27
USP8-208ENST00000559329 SSSCA1O60232 199 aa13.36□□□□□ -0.27
USP8-208ENST00000559329 TMEM50AO95807 157 aa13.36□□□□□ -0.27
USP8-208ENST00000559329 SERPINE2P07093 398 aa13.36□□□□□ -0.27
USP8-208ENST00000559329 OR8U9P0C7N5 309 aa13.36□□□□□ -0.27
USP8-208ENST00000559329 SEC11BP0C7V7 166 aa13.36□□□□□ -0.27
USP8-208ENST00000559329 EGR1P18146 543 aa13.36□□□□□ -0.27
USP8-208ENST00000559329 PVALBP20472 110 aaPredicted RBP13.36□□□□□ -0.27
USP8-208ENST00000559329 PJVKQ0ZLH3 352 aa13.36□□□□□ -0.27
USP8-208ENST00000559329 ZNF585BQ52M93 769 aa13.36□□□□□ -0.27
USP8-208ENST00000559329 BTNL8Q6UX41 500 aa13.36□□□□□ -0.27
USP8-208ENST00000559329 ODF3L1Q8IXM7 274 aa13.36□□□□□ -0.27
USP8-208ENST00000559329 DRAM1Q8N682 238 aa13.36□□□□□ -0.27
USP8-208ENST00000559329 CD177Q8N6Q3 437 aa13.36□□□□□ -0.27
USP8-208ENST00000559329 OR8U1Q8NH10 309 aa13.36□□□□□ -0.27
USP8-208ENST00000559329 LSM10Q969L4 123 aaKnown RBP13.36□□□□□ -0.27
USP8-208ENST00000559329 GPR146Q96CH1 333 aa13.36□□□□□ -0.27
USP8-208ENST00000559329 PARP11Q9NR21 331 aa13.36□□□□□ -0.27
USP8-208ENST00000559329 SPEF1Q9Y4P9 236 aa13.36□□□□□ -0.27
USP8-208ENST00000559329 TMEM218A2RU14 115 aa13.35□□□□□ -0.27
USP8-208ENST00000559329 FAM24AA6NFZ4 105 aa13.35□□□□□ -0.27
USP8-208ENST00000559329 ZNF737O75373 536 aa13.35□□□□□ -0.27
USP8-208ENST00000559329 MED6O75586 246 aa13.35□□□□□ -0.27
USP8-208ENST00000559329 HBZP02008 142 aa13.35□□□□□ -0.27
USP8-208ENST00000559329 SPP1P10451 314 aa13.35□□□□□ -0.27
USP8-208ENST00000559329 CCKARP32238 428 aa13.35□□□□□ -0.27
USP8-208ENST00000559329 EIF4EBP1Q13541 118 aaPredicted RBP13.35□□□□□ -0.27
USP8-208ENST00000559329 C22orf34Q6ZV56 151 aa13.35□□□□□ -0.27
USP8-208ENST00000559329 FAM90A1Q86YD7 464 aa13.35□□□□□ -0.27
USP8-208ENST00000559329 SPACA3Q8IXA5 215 aa13.35□□□□□ -0.27
USP8-208ENST00000559329 LYPD6BQ8NI32 183 aa13.35□□□□□ -0.27
USP8-208ENST00000559329 GALMQ96C23 342 aa13.35□□□□□ -0.27
USP8-208ENST00000559329 MAGT1Q9H0U3 335 aa13.35□□□□□ -0.27
USP8-208ENST00000559329 PLEKHF2Q9H8W4 249 aa13.35□□□□□ -0.27
USP8-208ENST00000559329 LIN7CQ9NUP9 197 aaKnown RBP13.35□□□□□ -0.27
USP8-208ENST00000559329 DUSP13Q9UII6 198 aa13.35□□□□□ -0.27
USP8-208ENST00000559329 PPP1R3CQ9UQK1 317 aa13.35□□□□□ -0.27
USP8-208ENST00000559329 ABCD4O14678 606 aa13.35□□□□□ -0.27
USP8-208ENST00000559329 KLF3P57682 345 aaPredicted RBP13.35□□□□□ -0.27
USP8-208ENST00000559329 BLOC1S1P78537 153 aa13.35□□□□□ -0.27
USP8-208ENST00000559329 SRSF3P84103 164 aaKnown RBP13.35□□□□□ -0.27
USP8-208ENST00000559329 FOXC1Q12948 553 aa13.35□□□□□ -0.27
USP8-208ENST00000559329 DOLPP1Q86YN1 238 aa13.35□□□□□ -0.27
USP8-208ENST00000559329 TMEM252Q8N6L7 170 aa13.35□□□□□ -0.27
USP8-208ENST00000559329 KCNS2Q9ULS6 477 aa13.35□□□□□ -0.27
USP8-208ENST00000559329 APC2O95996 2303 aa13.34□□□□□ -0.27
USP8-208ENST00000559329 SIGLEC5O15389 551 aa13.34□□□□□ -0.27
USP8-208ENST00000559329 IGKV1-5P01602 117 aa13.34□□□□□ -0.27
USP8-208ENST00000559329 APOC3P02656 99 aa13.34□□□□□ -0.27
USP8-208ENST00000559329 PRDX2P32119 198 aa13.34□□□□□ -0.27
USP8-208ENST00000559329 GABRA2P47869 451 aa13.34□□□□□ -0.27
USP8-208ENST00000559329 GLIPR1P48060 266 aa13.34□□□□□ -0.27
USP8-208ENST00000559329 PAX9P55771 341 aa13.34□□□□□ -0.27
USP8-208ENST00000559329 FAM27E3Q08E93 113 aa13.34□□□□□ -0.27
USP8-208ENST00000559329 SPRNQ5BIV9 151 aa13.34□□□□□ -0.27
USP8-208ENST00000559329 KRBOX4Q5JUW0 171 aa13.34□□□□□ -0.27
USP8-208ENST00000559329 Q6ZRM9 215 aa13.34□□□□□ -0.27
USP8-208ENST00000559329 ZNF295-AS1Q8N0V1 137 aa13.34□□□□□ -0.27
USP8-208ENST00000559329 ZNF645Q8N7E2 425 aa13.34□□□□□ -0.27
USP8-208ENST00000559329 ZBTB34Q8NCN2 500 aa13.34□□□□□ -0.27
USP8-208ENST00000559329 C5orf30Q96GV9 206 aa13.34□□□□□ -0.27
USP8-208ENST00000559329 MEGF10Q96KG7 1140 aa13.34□□□□□ -0.27
USP8-208ENST00000559329 LURAP1Q96LR2 239 aa13.34□□□□□ -0.27
USP8-208ENST00000559329 COQ3Q9NZJ6 369 aa13.34□□□□□ -0.27
USP8-208ENST00000559329 IGKV1D-17A0A075B6S4 117 aa13.33□□□□□ -0.28
USP8-208ENST00000559329 ATP6V1G2-DDX39BF2Z307 99 aa13.33□□□□□ -0.28
USP8-208ENST00000559329 ADCYAP1P18509 176 aa13.33□□□□□ -0.28
USP8-208ENST00000559329 IL2RGP31785 369 aa13.33□□□□□ -0.28
USP8-208ENST00000559329 CAV2P51636 162 aa13.33□□□□□ -0.28
USP8-208ENST00000559329 MSMO1Q15800 293 aa13.33□□□□□ -0.28
USP8-208ENST00000559329 ALKBH2Q6NS38 261 aa13.33□□□□□ -0.28
USP8-208ENST00000559329 FAM53AQ6NSI3 398 aaPredicted RBP13.33□□□□□ -0.28
USP8-208ENST00000559329 ATRAIDQ6UW56 229 aa13.33□□□□□ -0.28
USP8-208ENST00000559329 GCSAMQ8N6F7 178 aa13.33□□□□□ -0.28
USP8-208ENST00000559329 OR52L2PQ8NGH6 319 aa13.33□□□□□ -0.28
USP8-208ENST00000559329 OR13A1Q8NGR1 328 aa13.33□□□□□ -0.28
USP8-208ENST00000559329 MRGPRDQ8TDS7 321 aa13.33□□□□□ -0.28
USP8-208ENST00000559329 OR2V2Q96R30 315 aa13.33□□□□□ -0.28
USP8-208ENST00000559329 SLC25A31Q9H0C2 315 aa13.33□□□□□ -0.28
USP8-208ENST00000559329 HRH4Q9H3N8 390 aa13.33□□□□□ -0.28
USP8-208ENST00000559329 FAM212BQ9NTI7 297 aaPredicted RBP13.33□□□□□ -0.28
USP8-208ENST00000559329 RBM7Q9Y580 266 aaKnown RBP13.33□□□□□ -0.28
USP8-208ENST00000559329 CUL9Q8IWT3 2517 aa13.33□□□□□ -0.28
USP8-208ENST00000559329 KIAA2026Q5HYC2 2103 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms