RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 MAFIPQ8WZ33 124 aa12.07□□□□□ -0.48
SNRPA1-207ENST00000559309 TRIM63Q969Q1 353 aa12.07□□□□□ -0.48
SNRPA1-207ENST00000559309 FAHD2AQ96GK7 314 aa12.07□□□□□ -0.48
SNRPA1-207ENST00000559309 ZNF286AQ9HBT8 521 aa12.07□□□□□ -0.48
SNRPA1-207ENST00000559309 CHMP1AQ9HD42 196 aaPredicted RBP12.07□□□□□ -0.48
SNRPA1-207ENST00000559309 KCNIP1Q9NZI2 227 aa12.07□□□□□ -0.48
SNRPA1-207ENST00000559309 KLK11Q9UBX7 282 aa12.07□□□□□ -0.48
SNRPA1-207ENST00000559309 YPEL1O60688 119 aa12.06□□□□□ -0.48
SNRPA1-207ENST00000559309 DLX1P56177 255 aa12.06□□□□□ -0.48
SNRPA1-207ENST00000559309 MRPS15P82914 257 aaKnown RBP12.06□□□□□ -0.48
SNRPA1-207ENST00000559309 MADCAM1Q13477 382 aa12.06□□□□□ -0.48
SNRPA1-207ENST00000559309 IGSF11Q5DX21 431 aa12.06□□□□□ -0.48
SNRPA1-207ENST00000559309 SPANXN2Q5MJ10 180 aa12.06□□□□□ -0.48
SNRPA1-207ENST00000559309 FAM120AOSQ5T036 256 aa12.06□□□□□ -0.48
SNRPA1-207ENST00000559309 NCR3LG1Q68D85 454 aa12.06□□□□□ -0.48
SNRPA1-207ENST00000559309 FAM53AQ6NSI3 398 aaPredicted RBP12.06□□□□□ -0.48
SNRPA1-207ENST00000559309 FAM131AQ6UXB0 335 aa12.06□□□□□ -0.48
SNRPA1-207ENST00000559309 CLEC9AQ6UXN8 241 aa12.06□□□□□ -0.48
SNRPA1-207ENST00000559309 BEST4Q8NFU0 473 aa12.06□□□□□ -0.48
SNRPA1-207ENST00000559309 GALMQ96C23 342 aa12.06□□□□□ -0.48
SNRPA1-207ENST00000559309 YPEL2Q96QA6 119 aa12.06□□□□□ -0.48
SNRPA1-207ENST00000559309 SIRT7Q9NRC8 400 aa12.06□□□□□ -0.48
SNRPA1-207ENST00000559309 CUBNO60494 3623 aa12.05□□□□□ -0.48
SNRPA1-207ENST00000559309 ATRQ13535 2644 aa12.05□□□□□ -0.48
SNRPA1-207ENST00000559309 IGHV2-26A0A0B4J1V2 119 aa12.05□□□□□ -0.48
SNRPA1-207ENST00000559309 LANCL1O43813 399 aa12.05□□□□□ -0.48
SNRPA1-207ENST00000559309 TUSC2O75896 110 aa12.05□□□□□ -0.48
SNRPA1-207ENST00000559309 CD74P04233 296 aa12.05□□□□□ -0.48
SNRPA1-207ENST00000559309 IGHV4-38-2P0DP08 117 aa12.05□□□□□ -0.48
SNRPA1-207ENST00000559309 RCVRNP35243 200 aa12.05□□□□□ -0.48
SNRPA1-207ENST00000559309 ZNF134P52741 427 aa12.05□□□□□ -0.48
SNRPA1-207ENST00000559309 BPIFB3P59826 476 aa12.05□□□□□ -0.48
SNRPA1-207ENST00000559309 MORN2Q502X0 79 aa12.05□□□□□ -0.48
SNRPA1-207ENST00000559309 LDLRAD2Q5SZI1 272 aa12.05□□□□□ -0.48
SNRPA1-207ENST00000559309 ZNF660Q6AZW8 331 aaPredicted RBP12.05□□□□□ -0.48
SNRPA1-207ENST00000559309 ZNF782Q6ZMW2 699 aaPredicted RBP12.05□□□□□ -0.48
SNRPA1-207ENST00000559309 OVCH2Q7RTZ1 564 aa12.05□□□□□ -0.48
SNRPA1-207ENST00000559309 GDPD1Q8N9F7 314 aa12.05□□□□□ -0.48
SNRPA1-207ENST00000559309 BEND2Q8NDZ0 799 aa12.05□□□□□ -0.48
SNRPA1-207ENST00000559309 OR5AP2Q8NGF4 316 aa12.05□□□□□ -0.48
SNRPA1-207ENST00000559309 UBALD1Q8TB05 177 aa12.05□□□□□ -0.48
SNRPA1-207ENST00000559309 AGMATQ9BSE5 352 aa12.05□□□□□ -0.48
SNRPA1-207ENST00000559309 PCGF1Q9BSM1 259 aa12.05□□□□□ -0.48
SNRPA1-207ENST00000559309 ST6GALNAC5Q9BVH7 336 aa12.05□□□□□ -0.48
SNRPA1-207ENST00000559309 HEXA-AS1Q9H8Q6 139 aa12.05□□□□□ -0.48
SNRPA1-207ENST00000559309 PSG11Q9UQ72 335 aa12.05□□□□□ -0.48
SNRPA1-207ENST00000559309 COL6A5A8TX70 2615 aa12.05□□□□□ -0.48
SNRPA1-207ENST00000559309 SONP18583 2426 aaKnown RBP12.04□□□□□ -0.48
SNRPA1-207ENST00000559309 MEIS3P1A6NDR6 274 aa12.04□□□□□ -0.48
SNRPA1-207ENST00000559309 LY6LH3BQJ8 138 aa12.04□□□□□ -0.48
SNRPA1-207ENST00000559309 CTXN2P0C2S0 81 aa12.04□□□□□ -0.48
SNRPA1-207ENST00000559309 ZNF137PP52743 207 aa12.04□□□□□ -0.48
SNRPA1-207ENST00000559309 ACTBP60709 375 aa12.04□□□□□ -0.48
SNRPA1-207ENST00000559309 ACTG1P63261 375 aa12.04□□□□□ -0.48
SNRPA1-207ENST00000559309 KLRD1Q13241 179 aa12.04□□□□□ -0.48
SNRPA1-207ENST00000559309 LSAMPQ13449 338 aa12.04□□□□□ -0.48
SNRPA1-207ENST00000559309 GNMTQ14749 295 aa12.04□□□□□ -0.48
SNRPA1-207ENST00000559309 SLC25A48Q6ZT89 311 aaKnown RBP12.04□□□□□ -0.48
SNRPA1-207ENST00000559309 LDLRAD3Q86YD5 345 aa12.04□□□□□ -0.48
SNRPA1-207ENST00000559309 H1FOOQ8IZA3 346 aaPredicted RBP12.04□□□□□ -0.48
SNRPA1-207ENST00000559309 OR52L2PQ8NGH6 319 aa12.04□□□□□ -0.48
SNRPA1-207ENST00000559309 OR4P4Q8NGL7 312 aa12.04□□□□□ -0.48
SNRPA1-207ENST00000559309 OR13D1Q8NGV5 346 aa12.04□□□□□ -0.48
SNRPA1-207ENST00000559309 SETD6Q8TBK2 473 aa12.04□□□□□ -0.48
SNRPA1-207ENST00000559309 FAM216AQ8WUB2 273 aa12.04□□□□□ -0.48
SNRPA1-207ENST00000559309 FCAMRQ8WWV6 532 aa12.04□□□□□ -0.48
SNRPA1-207ENST00000559309 PRDM13Q9H4Q3 707 aa12.04□□□□□ -0.48
SNRPA1-207ENST00000559309 STAB1Q9NY15 2570 aa12.04□□□□□ -0.48
SNRPA1-207ENST00000559309 HIVEP2P31629 2446 aa12.03□□□□□ -0.48
SNRPA1-207ENST00000559309 IGHV1-69DA0A0B4J2H0 117 aa12.03□□□□□ -0.48
SNRPA1-207ENST00000559309 ANKRD20A5PA0PJZ0 165 aa12.03□□□□□ -0.48
SNRPA1-207ENST00000559309 J3QR06 171 aa12.03□□□□□ -0.48
SNRPA1-207ENST00000559309 SDCBPO00560 298 aaPredicted RBP12.03□□□□□ -0.48
SNRPA1-207ENST00000559309 RBBP9O75884 186 aa12.03□□□□□ -0.48
SNRPA1-207ENST00000559309 IGHV1-69P01742 117 aa12.03□□□□□ -0.48
SNRPA1-207ENST00000559309 TBPP20226 339 aa12.03□□□□□ -0.48
SNRPA1-207ENST00000559309 ZBTB25P24278 435 aa12.03□□□□□ -0.48
SNRPA1-207ENST00000559309 MIDNQ504T8 468 aa12.03□□□□□ -0.48
SNRPA1-207ENST00000559309 CT45A1Q5HYN5 189 aa12.03□□□□□ -0.48
SNRPA1-207ENST00000559309 VAX1Q5SQQ9 334 aa12.03□□□□□ -0.48
SNRPA1-207ENST00000559309 DHRS11Q6UWP2 260 aa12.03□□□□□ -0.48
SNRPA1-207ENST00000559309 ABHD12Q8N2K0 398 aa12.03□□□□□ -0.48
SNRPA1-207ENST00000559309 Q8N402 240 aa12.03□□□□□ -0.48
SNRPA1-207ENST00000559309 TEX29Q8N6K0 151 aa12.03□□□□□ -0.48
SNRPA1-207ENST00000559309 TMEM229BQ8NBD8 167 aa12.03□□□□□ -0.48
SNRPA1-207ENST00000559309 OR9G1Q8NH87 305 aa12.03□□□□□ -0.48
SNRPA1-207ENST00000559309 CT45A3Q8NHU0 189 aa12.03□□□□□ -0.48
SNRPA1-207ENST00000559309 S100ZQ8WXG8 99 aa12.03□□□□□ -0.48
SNRPA1-207ENST00000559309 LHX4Q969G2 390 aa12.03□□□□□ -0.48
SNRPA1-207ENST00000559309 ST6GALNAC6Q969X2 333 aa12.03□□□□□ -0.48
SNRPA1-207ENST00000559309 SUCNR1Q9BXA5 334 aa12.03□□□□□ -0.48
SNRPA1-207ENST00000559309 CLEC7AQ9BXN2 247 aa12.03□□□□□ -0.48
SNRPA1-207ENST00000559309 PARP12Q9H0J9 701 aaKnown RBP12.03□□□□□ -0.48
SNRPA1-207ENST00000559309 OR2S2Q9NQN1 319 aa12.03□□□□□ -0.48
SNRPA1-207ENST00000559309 YAE1D1Q9NRH1 226 aa12.03□□□□□ -0.48
SNRPA1-207ENST00000559309 OR1A1Q9P1Q5 309 aa12.03□□□□□ -0.48
SNRPA1-207ENST00000559309 IGHV3-43A0A0B4J1X8 118 aa12.02□□□□□ -0.49
SNRPA1-207ENST00000559309 TRAV40A0A0B4J280 105 aa12.02□□□□□ -0.49
SNRPA1-207ENST00000559309 SLC31A2O15432 143 aa12.02□□□□□ -0.49
SNRPA1-207ENST00000559309 IGHV3-43DP0DP04 118 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms