RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 ZNF826PQ6ZT77 177 aa9.5□□□□□ -0.89
CLPX-204ENST00000559152 SVBPQ8N300 66 aa9.5□□□□□ -0.89
CLPX-204ENST00000559152 BOLLQ8N9W6 283 aaKnown RBP9.5□□□□□ -0.89
CLPX-204ENST00000559152 PPP1R35Q8TAP8 253 aa9.5□□□□□ -0.89
CLPX-204ENST00000559152 LRRC46Q96FV0 321 aa9.5□□□□□ -0.89
CLPX-204ENST00000559152 LURAP1Q96LR2 239 aa9.5□□□□□ -0.89
CLPX-204ENST00000559152 RAB40CQ96S21 281 aa9.5□□□□□ -0.89
CLPX-204ENST00000559152 FZR1Q9UM11 496 aa9.5□□□□□ -0.89
CLPX-204ENST00000559152 SHANK1Q9Y566 2161 aa9.5□□□□□ -0.89
CLPX-204ENST00000559152 CACNA1GO43497 2377 aa9.5□□□□□ -0.89
CLPX-204ENST00000559152 DOCK7Q96N67 2140 aa9.5□□□□□ -0.89
CLPX-204ENST00000559152 M0R1B8 84 aa9.5□□□□□ -0.89
CLPX-204ENST00000559152 ATG12O94817 140 aa9.5□□□□□ -0.89
CLPX-204ENST00000559152 IGLV2-14P01704 120 aa9.5□□□□□ -0.89
CLPX-204ENST00000559152 OR8U9P0C7N5 309 aa9.5□□□□□ -0.89
CLPX-204ENST00000559152 DANCRP0C864 163 aa9.5□□□□□ -0.89
CLPX-204ENST00000559152 PSG2P11465 335 aa9.5□□□□□ -0.89
CLPX-204ENST00000559152 SELENOVP59797 346 aa9.5□□□□□ -0.89
CLPX-204ENST00000559152 TAGLNQ01995 201 aaKnown RBP9.5□□□□□ -0.89
CLPX-204ENST00000559152 BTN1A1Q13410 526 aa9.5□□□□□ -0.89
CLPX-204ENST00000559152 CXorf66Q5JRM2 361 aaPredicted RBP9.5□□□□□ -0.89
CLPX-204ENST00000559152 BTNL8Q6UX41 500 aa9.5□□□□□ -0.89
CLPX-204ENST00000559152 TMEM252Q8N6L7 170 aa9.5□□□□□ -0.89
CLPX-204ENST00000559152 ZNF645Q8N7E2 425 aa9.5□□□□□ -0.89
CLPX-204ENST00000559152 OR2Z1Q8NG97 314 aa9.5□□□□□ -0.89
CLPX-204ENST00000559152 OR8U1Q8NH10 309 aa9.5□□□□□ -0.89
CLPX-204ENST00000559152 FAM216AQ8WUB2 273 aa9.5□□□□□ -0.89
CLPX-204ENST00000559152 TREM1Q9NP99 234 aa9.5□□□□□ -0.89
CLPX-204ENST00000559152 UFSP2Q9NUQ7 469 aa9.5□□□□□ -0.89
CLPX-204ENST00000559152 PPP1R3CQ9UQK1 317 aa9.5□□□□□ -0.89
CLPX-204ENST00000559152 TRAV39A0A0B4J263 110 aa9.49□□□□□ -0.89
CLPX-204ENST00000559152 FAM24AA6NFZ4 105 aa9.49□□□□□ -0.89
CLPX-204ENST00000559152 C3orf80F5H4A9 247 aa9.49□□□□□ -0.89
CLPX-204ENST00000559152 WNT9BO14905 357 aa9.49□□□□□ -0.89
CLPX-204ENST00000559152 LPAR6P43657 344 aa9.49□□□□□ -0.89
CLPX-204ENST00000559152 GABRA2P47869 451 aa9.49□□□□□ -0.89
CLPX-204ENST00000559152 OR3A1P47881 315 aa9.49□□□□□ -0.89
CLPX-204ENST00000559152 KLF3P57682 345 aaPredicted RBP9.49□□□□□ -0.89
CLPX-204ENST00000559152 RPL23AP62750 156 aaKnown RBP9.49□□□□□ -0.89
CLPX-204ENST00000559152 KRBOX4Q5JUW0 171 aa9.49□□□□□ -0.89
CLPX-204ENST00000559152 Q6ZRG5 221 aa9.49□□□□□ -0.89
CLPX-204ENST00000559152 TCTEX1D1Q8N7M0 179 aa9.49□□□□□ -0.89
CLPX-204ENST00000559152 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.49□□□□□ -0.89
CLPX-204ENST00000559152 LYPD6BQ8NI32 183 aa9.49□□□□□ -0.89
CLPX-204ENST00000559152 LRRC29Q8WV35 223 aa9.49□□□□□ -0.89
CLPX-204ENST00000559152 GPR146Q96CH1 333 aa9.49□□□□□ -0.89
CLPX-204ENST00000559152 GPHA2Q96T91 129 aa9.49□□□□□ -0.89
CLPX-204ENST00000559152 TSNAXQ99598 290 aaKnown RBP9.49□□□□□ -0.89
CLPX-204ENST00000559152 WFDC1Q9HC57 220 aa9.49□□□□□ -0.89
CLPX-204ENST00000559152 DUSP13Q9UII6 198 aa9.49□□□□□ -0.89
CLPX-204ENST00000559152 BOD1L1Q8NFC6 3051 aa9.48□□□□□ -0.89
CLPX-204ENST00000559152 UMAD1C9J7I0 102 aa9.48□□□□□ -0.89
CLPX-204ENST00000559152 C12orf77C9JDV5 145 aa9.48□□□□□ -0.89
CLPX-204ENST00000559152 TRIM77I1YAP6 450 aa9.48□□□□□ -0.89
CLPX-204ENST00000559152 PRRG2O14669 202 aa9.48□□□□□ -0.89
CLPX-204ENST00000559152 ABCD4O14678 606 aa9.48□□□□□ -0.89
CLPX-204ENST00000559152 CHST1O43916 411 aa9.48□□□□□ -0.89
CLPX-204ENST00000559152 CEBPDP49716 269 aaPredicted RBP9.48□□□□□ -0.89
CLPX-204ENST00000559152 COL10A1Q03692 680 aa9.48□□□□□ -0.89
CLPX-204ENST00000559152 AESQ08117 197 aa9.48□□□□□ -0.89
CLPX-204ENST00000559152 CATR1Q13166 79 aa9.48□□□□□ -0.89
CLPX-204ENST00000559152 C10orf91Q5T1B1 145 aa9.48□□□□□ -0.89
CLPX-204ENST00000559152 CLEC9AQ6UXN8 241 aa9.48□□□□□ -0.89
CLPX-204ENST00000559152 SSX8Q7RTT4 187 aa9.48□□□□□ -0.89
CLPX-204ENST00000559152 STX12Q86Y82 276 aa9.48□□□□□ -0.89
CLPX-204ENST00000559152 DRAM1Q8N682 238 aa9.48□□□□□ -0.89
CLPX-204ENST00000559152 SEC11CQ9BY50 192 aa9.48□□□□□ -0.89
CLPX-204ENST00000559152 UQCC1Q9NVA1 299 aa9.48□□□□□ -0.89
CLPX-204ENST00000559152 CARHSP1Q9Y2V2 147 aaKnown RBP9.48□□□□□ -0.89
CLPX-204ENST00000559152 IGSF23A1L1A6 192 aa9.48□□□□□ -0.89
CLPX-204ENST00000559152 F8W036 122 aa9.48□□□□□ -0.89
CLPX-204ENST00000559152 HBZP02008 142 aa9.48□□□□□ -0.89
CLPX-204ENST00000559152 PRDX2P32119 198 aa9.48□□□□□ -0.89
CLPX-204ENST00000559152 AKR1C2P52895 323 aa9.48□□□□□ -0.89
CLPX-204ENST00000559152 GNPNAT1Q96EK6 184 aaPredicted RBP9.48□□□□□ -0.89
CLPX-204ENST00000559152 BSCL2Q96G97 398 aaPredicted RBP9.48□□□□□ -0.89
CLPX-204ENST00000559152 NKX6-2Q9C056 277 aaPredicted RBP9.48□□□□□ -0.89
CLPX-204ENST00000559152 MAGT1Q9H0U3 335 aa9.48□□□□□ -0.89
CLPX-204ENST00000559152 RNF115Q9Y4L5 304 aa9.48□□□□□ -0.89
CLPX-204ENST00000559152 WSB1Q9Y6I7 421 aa9.48□□□□□ -0.89
CLPX-204ENST00000559152 A8MXE2 369 aa9.47□□□□□ -0.89
CLPX-204ENST00000559152 SRRM5B3KS81 715 aa9.47□□□□□ -0.89
CLPX-204ENST00000559152 SPINT2O43291 252 aa9.47□□□□□ -0.89
CLPX-204ENST00000559152 DFFBO76075 338 aa9.47□□□□□ -0.89
CLPX-204ENST00000559152 TSPAN15O95858 294 aa9.47□□□□□ -0.89
CLPX-204ENST00000559152 PRH1P02810 166 aa9.47□□□□□ -0.89
CLPX-204ENST00000559152 ADH4P08319 380 aa9.47□□□□□ -0.89
CLPX-204ENST00000559152 CAMLGP49069 296 aa9.47□□□□□ -0.89
CLPX-204ENST00000559152 DVL1P1P54792 670 aaPredicted RBP9.47□□□□□ -0.89
CLPX-204ENST00000559152 NKX6-1P78426 367 aaPredicted RBP9.47□□□□□ -0.89
CLPX-204ENST00000559152 HTD2P86397 168 aa9.47□□□□□ -0.89
CLPX-204ENST00000559152 OR1L1Q8NH94 360 aa9.47□□□□□ -0.89
CLPX-204ENST00000559152 COQ2Q96H96 371 aa9.47□□□□□ -0.89
CLPX-204ENST00000559152 COA4Q9NYJ1 87 aa9.47□□□□□ -0.89
CLPX-204ENST00000559152 ELOVL5Q9NYP7 299 aa9.47□□□□□ -0.89
CLPX-204ENST00000559152 CACFD1Q9UGQ2 172 aa9.47□□□□□ -0.89
CLPX-204ENST00000559152 SSUH2Q9Y2M2 353 aa9.47□□□□□ -0.89
CLPX-204ENST00000559152 IGLV3-9A0A075B6K5 115 aa9.47□□□□□ -0.89
CLPX-204ENST00000559152 FAM90A26D6RGX4 464 aa9.47□□□□□ -0.89
CLPX-204ENST00000559152 RNASEK-C17orf49H0YIS7 233 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms