RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 MMP28Q9H239 520 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 OR1A1Q9P1Q5 309 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 HILPDAQ9Y5L2 63 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 MINOS1-NBL1R4GNA1 71 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 H3BUX3 64 aa9.2□□□□□ -0.94
SNX1-204ENST00000559061 TMEM127O75204 238 aa9.2□□□□□ -0.94
SNX1-204ENST00000559061 CD3GP09693 182 aa9.2□□□□□ -0.94
SNX1-204ENST00000559061 PPP1CCP36873 323 aaKnown RBP9.2□□□□□ -0.94
SNX1-204ENST00000559061 TMBIM6P55061 237 aa9.2□□□□□ -0.94
SNX1-204ENST00000559061 HTD2P86397 168 aa9.2□□□□□ -0.94
SNX1-204ENST00000559061 CDNFQ49AH0 187 aa9.2□□□□□ -0.94
SNX1-204ENST00000559061 MORN2Q502X0 79 aa9.2□□□□□ -0.94
SNX1-204ENST00000559061 TPTE2P1Q5T6R2 138 aa9.2□□□□□ -0.94
SNX1-204ENST00000559061 HACD4Q5VWC8 232 aa9.2□□□□□ -0.94
SNX1-204ENST00000559061 TRAT1Q6PIZ9 186 aa9.2□□□□□ -0.94
SNX1-204ENST00000559061 SLC25A48Q6ZT89 311 aaKnown RBP9.2□□□□□ -0.94
SNX1-204ENST00000559061 MOB1BQ7L9L4 216 aa9.2□□□□□ -0.94
SNX1-204ENST00000559061 CROCCP3Q8IVE0 287 aa9.2□□□□□ -0.94
SNX1-204ENST00000559061 TMEM86BQ8N661 226 aa9.2□□□□□ -0.94
SNX1-204ENST00000559061 C8orf31Q8N9H6 132 aa9.2□□□□□ -0.94
SNX1-204ENST00000559061 ZFAND2BQ8WV99 257 aa9.2□□□□□ -0.94
SNX1-204ENST00000559061 SSMEM1Q8WWF3 244 aa9.2□□□□□ -0.94
SNX1-204ENST00000559061 CFHR4Q92496 578 aa9.2□□□□□ -0.94
SNX1-204ENST00000559061 GCDHQ92947 438 aaPredicted RBP9.2□□□□□ -0.94
SNX1-204ENST00000559061 ZDHHC16Q969W1 377 aa9.2□□□□□ -0.94
SNX1-204ENST00000559061 MALSU1Q96EH3 234 aa9.2□□□□□ -0.94
SNX1-204ENST00000559061 SSX3Q99909 188 aa9.2□□□□□ -0.94
SNX1-204ENST00000559061 MIXL1Q9H2W2 232 aa9.2□□□□□ -0.94
SNX1-204ENST00000559061 SCOCQ9UIL1 159 aa9.2□□□□□ -0.94
SNX1-204ENST00000559061 BOLA1Q9Y3E2 137 aa9.2□□□□□ -0.94
SNX1-204ENST00000559061 POMT1Q9Y6A1 747 aa9.2□□□□□ -0.94
SNX1-204ENST00000559061 COL6A5A8TX70 2615 aa9.2□□□□□ -0.94
SNX1-204ENST00000559061 METTL21EPA6NDL7 271 aa9.19□□□□□ -0.94
SNX1-204ENST00000559061 SERPINE3A8MV23 424 aa9.19□□□□□ -0.94
SNX1-204ENST00000559061 GPR137BO60478 399 aa9.19□□□□□ -0.94
SNX1-204ENST00000559061 HPGDSO60760 199 aa9.19□□□□□ -0.94
SNX1-204ENST00000559061 GSTT2P0CG29 244 aa9.19□□□□□ -0.94
SNX1-204ENST00000559061 GSTT2BP0CG30 244 aa9.19□□□□□ -0.94
SNX1-204ENST00000559061 HTR1DP28221 377 aa9.19□□□□□ -0.94
SNX1-204ENST00000559061 DYNLT3P51808 116 aa9.19□□□□□ -0.94
SNX1-204ENST00000559061 ZNF137PP52743 207 aa9.19□□□□□ -0.94
SNX1-204ENST00000559061 AANATQ16613 207 aa9.19□□□□□ -0.94
SNX1-204ENST00000559061 LRRC75BQ2VPJ9 315 aa9.19□□□□□ -0.94
SNX1-204ENST00000559061 UBE2NLQ5JXB2 153 aa9.19□□□□□ -0.94
SNX1-204ENST00000559061 FOXB2Q5VYV0 432 aa9.19□□□□□ -0.94
SNX1-204ENST00000559061 Q6ZS49 121 aa9.19□□□□□ -0.94
SNX1-204ENST00000559061 SAMD12Q8N8I0 201 aa9.19□□□□□ -0.94
SNX1-204ENST00000559061 SETD6Q8TBK2 473 aa9.19□□□□□ -0.94
SNX1-204ENST00000559061 RAB2BQ8WUD1 216 aa9.19□□□□□ -0.94
SNX1-204ENST00000559061 KCTD12Q96CX2 325 aaKnown RBP9.19□□□□□ -0.94
SNX1-204ENST00000559061 C5orf30Q96GV9 206 aa9.19□□□□□ -0.94
SNX1-204ENST00000559061 CABLES2Q9BTV7 478 aa9.19□□□□□ -0.94
SNX1-204ENST00000559061 IFI27L2Q9H2X8 130 aa9.19□□□□□ -0.94
SNX1-204ENST00000559061 RIMS4Q9H426 269 aaPredicted RBP9.19□□□□□ -0.94
SNX1-204ENST00000559061 AUNIPQ9H7T9 357 aa9.19□□□□□ -0.94
SNX1-204ENST00000559061 CHMP1AQ9HD42 196 aaPredicted RBP9.19□□□□□ -0.94
SNX1-204ENST00000559061 DPM3Q9P2X0 92 aa9.19□□□□□ -0.94
SNX1-204ENST00000559061 JPT1Q9UK76 154 aa9.19□□□□□ -0.94
SNX1-204ENST00000559061 VPREB3Q9UKI3 123 aa9.19□□□□□ -0.94
SNX1-204ENST00000559061 FAM96BQ9Y3D0 163 aa9.19□□□□□ -0.94
SNX1-204ENST00000559061 TENM1Q9UKZ4 2725 aa9.18□□□□□ -0.94
SNX1-204ENST00000559061 TRAV18A0A075B6X5 111 aa9.18□□□□□ -0.94
SNX1-204ENST00000559061 A6NDX4 124 aa9.18□□□□□ -0.94
SNX1-204ENST00000559061 FAM181BA6NEQ2 426 aa9.18□□□□□ -0.94
SNX1-204ENST00000559061 RNF212BA8MTL3 300 aa9.18□□□□□ -0.94
SNX1-204ENST00000559061 TRDCB7Z8K6 153 aa9.18□□□□□ -0.94
SNX1-204ENST00000559061 SPINT2O43291 252 aa9.18□□□□□ -0.94
SNX1-204ENST00000559061 YPEL1O60688 119 aa9.18□□□□□ -0.94
SNX1-204ENST00000559061 PROP1O75360 226 aa9.18□□□□□ -0.94
SNX1-204ENST00000559061 GSTP1P09211 210 aaKnown RBP9.18□□□□□ -0.94
SNX1-204ENST00000559061 ELK1P19419 428 aa9.18□□□□□ -0.94
SNX1-204ENST00000559061 CD24P25063 80 aa9.18□□□□□ -0.94
SNX1-204ENST00000559061 RANBP1P43487 201 aa9.18□□□□□ -0.94
SNX1-204ENST00000559061 RORCP51449 518 aa9.18□□□□□ -0.94
SNX1-204ENST00000559061 LGALS4P56470 323 aa9.18□□□□□ -0.94
SNX1-204ENST00000559061 FAM189A2Q15884 450 aa9.18□□□□□ -0.94
SNX1-204ENST00000559061 TMEM30BQ3MIR4 351 aa9.18□□□□□ -0.94
SNX1-204ENST00000559061 Q3ZCU0 254 aa9.18□□□□□ -0.94
SNX1-204ENST00000559061 IGSF11Q5DX21 431 aa9.18□□□□□ -0.94
SNX1-204ENST00000559061 LY6G6FQ5SQ64 297 aa9.18□□□□□ -0.94
SNX1-204ENST00000559061 RBMS3Q6XE24 437 aaKnown RBP9.18□□□□□ -0.94
SNX1-204ENST00000559061 YPEL2Q96QA6 119 aa9.18□□□□□ -0.94
SNX1-204ENST00000559061 JMJD8Q96S16 334 aa9.18□□□□□ -0.94
SNX1-204ENST00000559061 BCL7BQ9BQE9 202 aa9.18□□□□□ -0.94
SNX1-204ENST00000559061 ZNF251Q9BRH9 671 aa9.18□□□□□ -0.94
SNX1-204ENST00000559061 AGMATQ9BSE5 352 aa9.18□□□□□ -0.94
SNX1-204ENST00000559061 SLIRPQ9GZT3 109 aaKnown RBP9.18□□□□□ -0.94
SNX1-204ENST00000559061 TOLLIPQ9H0E2 274 aa9.18□□□□□ -0.94
SNX1-204ENST00000559061 OR2S2Q9NQN1 319 aa9.18□□□□□ -0.94
SNX1-204ENST00000559061 C1RLQ9NZP8 487 aa9.18□□□□□ -0.94
SNX1-204ENST00000559061 COMMD3Q9UBI1 195 aa9.18□□□□□ -0.94
SNX1-204ENST00000559061 ANAPC10Q9UM13 185 aa9.18□□□□□ -0.94
SNX1-204ENST00000559061 A0A0A6YYH2 397 aa9.17□□□□□ -0.94
SNX1-204ENST00000559061 TMEM89A2RUT3 159 aa9.17□□□□□ -0.94
SNX1-204ENST00000559061 A6NJ64 397 aa9.17□□□□□ -0.94
SNX1-204ENST00000559061 FAM90A9PA6NNJ1 464 aa9.17□□□□□ -0.94
SNX1-204ENST00000559061 POM121CA8CG34 1229 aa9.17□□□□□ -0.94
SNX1-204ENST00000559061 LEUTXA8MZ59 168 aa9.17□□□□□ -0.94
SNX1-204ENST00000559061 TRIM77I1YAP6 450 aa9.17□□□□□ -0.94
SNX1-204ENST00000559061 FABP7O15540 132 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms